GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-04-16 19:56:31, GGGenome : Ciona intestinalis genome, KH (Jul, 2008)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KhC3
position: 2582474-2582488
ATAAATTAGAACTTATAAAAGTTATTAATA2582474AATGTTGTCAATGAACCACCTATGTTAAACACAAACCTAAAACGT
KhL61
position: 35053-35067
GGGCATGATGAGATGACACCGCATCACATT35053AATGTTGTCAATGAAAAACGCAAGTATAGAAAGTGGAATAGTGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/KH/TTCATTGACAACATT
lang : en | db : KH | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.081 | search_plus_done; http://172.18.8.77:28231/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.093 | 0.004 | search_minus_done; http://172.18.8.77:28231/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.095 | 0.002 | cgi_end;

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