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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-04-29 12:58:22, GGGenome : Solanum lycopersicum genome, SL3.00 (Feb, 2017)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

SL3.0ch00
position: 6031744-6031758
AAACCATTTCTGGATTCTTTTTTCATCATC6031744TTCATTGACAACATTTTGGTTTATTCGCAGAGTAAGGATGAGAAT
SL3.0ch02
position: 4645266-4645280
CAAAGTTACCTAGATTAATTTGTCATTGTC4645266TTCATTGACAACATTTTGGTATATTAGAAAAATAAGGGAGATCAC
SL3.0ch04
position: 8489162-8489176
CACGAACTATATTCAACATTTTAGTCAAAA8489162TTCATTGACAACATTATATATGTACAAAATTTGTATAAAATTATT
SL3.0ch05
position: 61833200-61833214
AAGACAACGTGACAAAATTGAAATTTCTAG61833200TTCATTGACAACATTTTAATTAATAACAATTCAATCAATTTTATG
SL3.0ch05
position: 64021937-64021951
CAGAATTCAATGAAAGTCGCGAACATACAC64021937TTCATTGACAACATTTTATTGGGCCAGGGTCCAATATTGAGCAAA
SL3.0ch07
position: 67920697-67920711
TAATCACAATGGAAGCAAGAATGACAAGTT67920697TTCATTGACAACATTATCCATCACCTGTGACCTATAGCTCATGGG
SL3.0ch08
position: 52364833-52364847
CAACGTAACTTAGAAGCTTTCCTCAAATAC52364833TTCATTGACAACATTTTCAATCATATCAATTAAAATATAAGTTTT
SL3.0ch10
position: 26532383-26532397
AGAAGTTACCTAAATTCATTTGTCATTGTC26532383TTCATTGACAACATTTTGGTATATTCAAAAAATGTGGGTGAACAC
SL3.0ch12
position: 66410890-66410904
AACAAAATAATTGACTCTAAGCTAAAATAA66410890TTCATTGACAACATTTTCTTGCCATGTCCTTGTGTAAATGATCTC
SL3.0ch03
position: 41947592-41947606
GTGATCACCCTCATTTTTTGAATATACAAA41947592AATGTTGTCAATGAAGACAATGAAAAATGAATCTAGGTAATTTCA
SL3.0ch03
position: 68871076-68871090
TTGTTTTATTGAATTAAATTTTAATCAGTA68871076AATGTTGTCAATGAAGTGCTCAATGGTGTGGCCTAGTGGTTAATG
SL3.0ch06
position: 45222533-45222547
GGTTCTAATCAACTCAAGTTTTGGAAAGAA45222533AATGTTGTCAATGAAATGCCTCCATCTCTTGTTTCTAAATTATCT
SL3.0ch09
position: 9991084-9991098
TGAGTGATAGAGTAGAAGCATATATCTGAT9991084AATGTTGTCAATGAATAAGAAATTCAACACCACAAAGTAATGAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/SL3.0/TTCATTGACAACATT
lang : ja | db : SL3.0 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.076 | 0.068 | search_plus_done; http://172.18.8.72:28276/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.009 | search_minus_done; http://172.18.8.72:28276/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=41
0.087 | 0.002 | cgi_end;

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