GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-04-20 18:49:46, GGGenome : C. elegans genome, WS220/ce10 (Oct, 2010)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

chrIII:5229468-5229482
CGTGACCAGGAAGGACAAGATGTGCTTCTT5229468TTCATTGACAACATTTTCCGTTTCACCCAGGCTGGATCTGAAGTG
chrIII:3041678-3041692
ACGTATCTCAGCGGGAGAAATAGTTACAAA3041678AATGTTGTCAATGAAGTACTTGTAGAGCTCAAAATTTCCTACAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ce10/TTCATTGACAACATT
lang : en | db : ce10 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.082 | 0.074 | search_plus_done; http://172.18.8.76:28109/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.086 | 0.004 | search_minus_done; http://172.18.8.76:28109/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.086 | 0.000 | cgi_end;

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