GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-01 10:26:48, GGGenome : Leersia perrieri genome, Lperr_V1.4 (Mar, 2014)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

5 dna:chromosome chromosome:Lperr_V1.4:5:1:20807039:1
position: 5923116-5923130
TATGATTGAGCACTCCTACCTACTTTGCAA5923116AATGTTGTCAATGAACTGTTTGTTCGCTGCATAAATGTTCAATGA
5 dna:chromosome chromosome:Lperr_V1.4:5:1:20807039:1
position: 18768258-18768272
TCCTTCATAAATTACCTGAGTGAAACGGAA18768258AATGTTGTCAATGAACAGAAGCACATCTTGTCCTTCAGCATCACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/Lperr_V1.4/AATGTTGTCAATGAA
lang : en | db : Lperr_V1.4 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.078 | 0.070 | search_plus_done; http://172.18.8.75:28178/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.083 | 0.005 | search_minus_done; http://172.18.8.75:28178/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=48
0.083 | 0.000 | cgi_end;

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