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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-05-13 17:50:56, GGGenome : Mouse genome, GRCm38/mm10 (Dec, 2011)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chr1:3068581-3068595
TTTCCATGTGAATGTTGGCTTTCCATTACT3068581TATGTTGTTAATGAAGATCAGCCTTAGTCCATGGTGGTCTGATAG
chr1:3234020-3234033
TCAATGCAATCCCCATCAAAATCCCAACTC3234020AATTTT-TCAATGAAGTAGAAAGGACAATCAGCATATTCATCTGG
chr1:3248577-3248591
TGCTTCCCTTTCTCAAGCTGTTTTCTCAGG3248577AAT-TTGTCACATGAAATGAAAATATAACACCATACCATGCCTGTG
chr1:3276149-3276163
CGAGATCTTGCAGGGAACCCACGCGCAAGC3276149AATGTTCTCAAGGAAACGAGGGAAAAATGTATGCTTTAAGTGTGG
chr1:3365594-3365608
GATTAGGTAAGAGCTGGGAGTCTGTGAACC3365594AATGTTGATC-ATGAAGTAGAGACAACACAGAGATATCATATCCAT
chr1:3405152-3405166
TCAGTTCCTGATATGTACACATGCTCAGTA3405152AATGTTTTCAAAGAAAATGAACATAATAATTAATGAAGATTTCTT
chr1:3418240-3418253
TAGAGGTCTTGGTAGATACAGGGGACAGGA3418240ACTG-TGTCAATGAAAAGGTTCAATTCAAAGAAAGCCAAACTTTG
chr1:3581109-3581123
GAATTATGAACATTTACACAATTTTATTGT3581109AATGTTATCAATGCAAACAGCACAAGTGATAGCTAAAAAGAGCAA
chr1:3590725-3590737
AGCATTCCTATTTAAATCACCATACCATCC3590725AATGTT-TC-ATGAATAGGGATGGAGAATATAAAATGCTTCCTCA
chr1:3664679-3664693
AGACTATCTGGTTCATTATGTAAGTTGTAA3664679AATGTTGTCAATGTGAATTTTTAAAGATTTATTTATTATATTTGA
chr1:3813584-3813596
AGAGAAAATAAAGAATCATATTTTAGAATT3813584AATGTTG-CAAT-AATTATTACATAGAAAATGTATATAGAAATAA
chr1:3926477-3926491
ACTTGCATGACTCAAGCTCAAAAGACAATG3926477AATCTTTTCAATGAAGTACCCCAAACTCTGAATTGGTTCAATTTT
chr1:3954595-3954610
ATATAATAGCCAGAAGTGGGAAACAACCCA3954595AATGTTCCTCAATGAAAAAAAATGGATACAAAAATGTGGTCCATTT
chr1:4043757-4043772
AAAATCTTGATAATAATGCTGGTAAAAATA4043757AATGTTGGTCAATGATCGTGGAAGGATGCTGTAGGATGAACACTGA
chr1:4862239-4862252
AATACCTGGTACATAGTAGCTCTCAAAGGT4862239AA-GTTGTCACTGAATTAGTGTATATCCATATGGTTTTTGCTAAT
chr1:5002466-5002479
GGAAAAGCAAATTCTACTATTCTACTAAAG5002466AATGTAG-CAATGAAAATTTTCTAATGGCATTCTTCTATATTCAT
chr1:5304775-5304789
CAGTACACAGAAAAACTGAAGGTTATACGA5304775AAGTTTGTCAATGAAATTATTATAAAATCTTATGTTTAAATTTGA
chr1:5606662-5606676
TGTGAGTGTCATTAACTTTCCACCAATCAC5606662AATGTTGCCAATGATTAAGGGAACAGATCAAAACAGACTACAATC
chr1:5621547-5621560
CCAGACTTCTTTACCTTCATTTTTACCTAA5621547AATGTTGTTAA-GAAGAGTCTTAGCTCCTACCTGTGGATCAGGAT
chr1:5655878-5655891
TTATTCATGATGTCTCTGGTTTCTTTTGTT5655878AATTTT-TCAATGAACTCATAAATTACCATCTGACCCAGAACCTG
chr1:5775753-5775765
TGTAGAAGATACCTTAGAAGATATTGACAC5775753AATG--GTCAATGAAAATACAAAACACACAAAAAAAACCTAACCC
chr1:5803855-5803869
GATAAAATAATAAAGTATCTGTTCTTACAG5803855AATGTTTTCCATGAATCCTTTTATGTAATGTCGCCATTCTATTTG
chr1:5831814-5831826
ACCTCTAGAGATCTTAATAAAATAAAATTT5831814AAT-TTGTCAA-GAAAGGTAAAAAATTAAAAGCTTATAAAGAGCA
chr1:5866408-5866422
TCACCAAGCAGGAGTTTCATACTTGTTCCC5866408AATGTTGTCAGTCAAGCATTAGTTAGACTCTGTTAGCCTAATTAA
chr1:5892521-5892533
TCCATGATTAACAGAGAACTGTGACAAGAA5892521AATGTTG--AATGAAACACAGACAGAGCTTGAATTCCTGGCACTC
chr1:6089772-6089785
AGATGTTTTGCTAAAGCAGACAGGTGAAGG6089772AATGTTG-CAGTGAAGCAGACACAAATGAAAGGTTAAGGCAGACT
chr1:6183723-6183736
ATTTCATCACTTTCTATTTATTAATAGATG6183723AATGTTGT-AATGCATCAGAAGATACATGGCATGATTGTGTATTA
chr1:6542661-6542675
AAATACTTCATTCACTCTGGCTACTGTAGA6542661AATGTTGCTC-ATGAAACATGCACTATTAAATCAAGAGACCCCCTG
chr1:6753559-6753572
GGAATGACTCTCATTGTCATTTTGCAGGTC6753559CATGTTGTCAA-GAATAAGGAACTGAACTCAATCAAGCTAGCTTG
chr1:6759351-6759365
TAGAAGCTGTTAAAGCAGGACCTCACAAAC6759351AATGATGTCAAAGAAAATATGCTGGTATTTTATGTGCACTTGTTA
chr1:6830796-6830809
ACCTTTGTTTTTTGTTGGCTCATCTGTACC6830796AA-GTAGTCAATGAAAAGAAAGTATTTTTCATGTACTGTATTGAA
chr1:7168988-7169001
CAGCAACTTCAGAGTTCGGGCAGCTATTAA7168988AATGTT-TCATTGAATTTTTCTGATAAGTATTTATTTCCATATAA
chr1:7265512-7265524
TGCCCTGAAAAGAACAACAATTTATTTGAG7265512AAT-TTGT-AATGAACACAGAGCAAATGCTGGAGTCATATGTGGG
chr1:7395631-7395646
GGAAGTGACTATACCCTGATTGGAAGTGAC7395631CATGTTGTCACATGAAGCGGCCACACTGTGACCAGAAGGGACCAGA
chr1:7416337-7416350
TCTACCTAAACTAATCCATCAGTCCATCAT7416337AAT-TTGTCAATGACTGTTTATTTACGACTTACATACTAAAGCAT
chr1:7463890-7463902
AAAATTCATATGGAAGAGCACAAGATCCTG7463890AA--TTGTCAATGAAATCCTGAGTAAAATGAATAAGAGTAGTGGT
chr1:7494264-7494277
AACCTGCTCTGAACTGTCATAGGAGATGGG7494264AA-GTTGTAAATGAATGTAAATGACTGTCTTTCACTAACAGGGCT
chr1:7724219-7724232
TTAAAAGAATTCCAAAAGAACTTCCTGATA7724219AATGTT-TCATTGAATTTAAGAATCCAAGATAATTTCTAAATTTA
chr1:7925616-7925631
ATATGCTGCCCTTTCCCCTATAATCTTTTG7925616AATGTTAGTCAAGGAAGAAAGGGCCAAAAAGGTGGTTCAGTGGATA
chr1:7944677-7944691
CGAGACCTTGCAGGGAACCCACGCGCAGGC7944677AATGTTCTCAAGGAAACGAGGGAAACATGTATGCTTTAAGTGTGG
chr1:8071631-8071645
ATCTTGACAAGTCATTTCATATTCATTGTA8071631ATTGTTGTCAATTAACTAATTGTGTAGATCCTAATTTAGATAAGG
chr1:8276664-8276676
ATATTTGAACAGAACATGAAGTACATTTTA8276664AATGTT-TCAAT-AATGAATATAATTGAATTTGAAAATATAAGCT
chr1:8456252-8456265
CATATTTATATGCATGCATGTATGTACACA8456252AAAGTTGTC-ATGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA
chr1:8591285-8591297
AAGTATTAAACAGAGGGGAAAAAAACATAT8591285AATGTT-TCAAT-AATCTCCGCTTCCCTTTGGAACACCCCTGTCA
chr1:8592682-8592695
AGTAAGACAGGGACAAAGCCAGGCTCTGGC8592682AATGATGTCAA-GAATTAGTGAACTCACTAACCTGTAGTAAGAAC
chr1:8892444-8892458
ATCTTGACAAGTCTTTTCATATTCATTGTA8892444ATTGTTGTCAATTAACTAATCCTGTGGATCCTAATTTAGATAAGG
chr1:8908725-8908737
TTAAGAATAGATACAACCCATAAAAAATCA8908725AAT-TTG-CAATGAAAATTAAGGTAGAAATTCAGATATAACAAAA
chr1:8995706-8995719
GTCACATGACAACTCATATAGAAGAGATTT8995706AATGTAGT-AATGAAGTTATATAGCAGCCTGTTCAACAAATAAAT
chr1:9108311-9108324
GTGCAAATTTTATAATCTTCCTCAGTGGTT9108311AATGTTGTGAA-GAAAAAGAAATAACTTCCCATTTTTTAAAAATA
chr1:9207059-9207072
ACTATGTTCAATTCTACCTAATTTGTAGGC9207059AATGTTGT-AATTAATAACATAAATAATTTATATTTCATATTATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/mm10/2/AATGTTGTCAATGAA
lang : ja | db : mm10 | k : 2 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.089 | 0.078 | search_plus_done; http://172.18.8.78:28019/match?q=AATGTTGTCAATGAA&k=2&no_gap=0&offset=0&limit=50
0.110 | 0.021 | search_minus_done; http://172.18.8.78:28019/match?q=TTCATTGACAACATT&k=2&no_gap=0&offset=0&limit=0
0.110 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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