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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-04-19 03:20:51, GGGenome : Human genome, GRCh37/hg19 (Feb, 2009)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

chr1:12179454-12179468
TCTGTGCACCTGACCAGAAGCATAGACTTC12179454AGGTCAAAAGGACCTACCAAGAGCAAAGCAGGATTAATGGAAATT
chr1:31841785-31841799
CTAGTTCCTGGCTGCCTTTTTTGCTGCTGG31841785AGGTCACAATGACCTCACTCAGTGGAGGGCCCTGACTTCTGGGCA
chr1:38881083-38881097
AAACAAACAAAAAGAAATGGTAATAATATT38881083AGGTCAAAGTGACCTGGGAGCCAACCAAAGGAGCTCTCAGAAGCC
chr1:41617345-41617358
CTGAACATGTTTCTTTTAGGTATTTGTCCC41617345AGGT-AAAATGACCTGTAAAGGAAATAGAAATCTATATCACAGTC
chr1:49898946-49898959
GAATCCCAATTTGTAGCCAATCAGAAGCAT49898946AGGT-AAAATGACCTTGGCTTGTGACTGGCGTAGGAAGTGGGGGC
chr1:68277383-68277396
GCCCAGAGCAAGCTGTACCCTATTCACATC68277383AGGTCAAAA-GACCTACTTACTCTGTGGTGTCAAAAACACATTTT
chr1:74769507-74769520
CCAGTAAGATCATTTGCCATTCATGGGAGG74769507AGGTCAAAAT-ACCTACAGTAACAGGAGTTTGGCAGAAGTTGATT
chr1:75169242-75169256
CGAGATACGGTCAAGGAGGCGCAAAGAGGT75169242AGGTCAAAGTGACCTGACAGGTTTTGCTGTTCTTGGAAATCGTGC
chr1:76179403-76179417
GGACACATAATTAAAGTAAGTCCTGCCCTT76179403AGGTCAAAATGATCTTGATGTTATTATATTTAAATTGTGCTATAC
chr1:77409983-77409997
ATTATACCACTTACGCAGCTAACAGTTTGT77409983AGGTCAAGATGACCTAGAGCCAAGAATGTGATATTCATTATGATA
chr1:101109110-101109123
TAAGAATTCTAAATAAAGATATATAAATGA101109110AGGT-AAAATGACCTCAGAATGAACAATGTCATGAGAATCCAAGC
chr1:117427476-117427489
TGACATTGACACTTCTCCTGTGGAGTGGTG117427476AGGTC-AAATGACCTCTCCTTGTAAACTTGGGCGGATCTTTGTGA
chr1:117575141-117575155
GCCAAAAATGGAATTCTTGCAGCAGGAGGT117575141TGGTCAAAATGACCTCTAAACCTCTTTCATCTCTAAGCATCCATA
chr1:143707216-143707229
AGTCAACTGCTATTTTCTTTCCCACTATGG143707216AGG-CAAAATGACCTTTAAGAAAATAGACCTTATTTTTTAGAGTA
chr1:147894725-147894738
AGTCAACTGCTATTTTCTTTCCCACTATGG147894725AGG-CAAAATGACCTTTAAGAAAATAGACCTTATTTTTTAGAGTA
chr1:149634660-149634673
AGTCAACTGCTATTTTTTTTCCCACTATGG149634660AGG-CAAAATGACCTTTAAGAAAATAGACCTTATTTTTTAGAGTA
chr1:161398961-161398975
AACAATTTAGTTGACTCTATGTAAAAGACC161398961AGGTCAAAATGAACTTTATAAAATGGAAAATAATAGGATGTTATT
chr1:173469118-173469132
AATCTAAGTCATGAAGTCAGCACAAAATAC173469118AGGTCATAATGACCTTGCTGATAAAACAGGTTGCAGTAAAGGAGC
chr1:175438164-175438177
AAAATGAGCAGAAAATAGGCCTGAGGGAGG175438164A-GTCAAAATGACCTTCAGTTTGGAGATTGCCACCTAACCAAGAT
chr1:175878282-175878296
CACCCACTGTAACATCCCAAAGTTAGTGTG175878282AGGTCAAAATGACTTAATTTTGAATCTGAAATTTGAATTTGGGAA
chr1:176024088-176024103
TTTACCTCCACCTCTGAAAATGCTGTATGA176024088AGGTCAATAATGACCTCTAAGTTGCTAAACAGAGCAGTCAACTCCG
chr1:186762304-186762318
TGTTCTGTAGTTTACTCCTCTTTTGTGGTC186762304AGGTCAAAATGATCTTCGACACGATGTATCTTTTGCCGTAAATGC
chr1:202694155-202694168
AATGTTCTTTGGCCTCCACTCACCTGGAAC202694155AGGTC-AAATGACCTCACCATTCCATTCCTCTACTGCAATGCAGC
chr1:204643618-204643631
GGCTCAGGTGTGTTTCAGGGAGAGCTGGGA204643618AGGTCAAAATG-CCTGGCAGAGGGTATACGCACTACTGGGGCACT
chr1:210587751-210587765
TAATCATGTCTTCTTTTGCTAGTGGTTATT210587751AGGTCAAAATGAACTTGCTTTGGAGAGCTGGAAAAGGGTTGAAAA
chr1:213248562-213248576
GAGCTACAGTCTTTTGAATAACTCATGTCC213248562AGGTCATAATGACCTTAACCTTACGTAATGTCCAGTTTATAATGA
chr1:222269195-222269209
AGTTAGACCCCACAGAAACCACGCTGTCAA222269195AGGTCACAATGACCTTCCAAGTGGCAATCTCCAGGACATTTCTCA
chr1:224785546-224785559
GCCCTGATTTTTAGCTGGTCAGTCAGAAAC224785546AGGT-AAAATGACCTGGGGTTGGTAATTGGCATCAGAAGTAGGGG
chr1:231948622-231948635
CTTGGTCTAAGCCTCATGGGATTAGATCTG231948622AGGTCAAAATG-CCTATAAAGTATTGATCAAGGGCATTGTAGCAT
chr1:235028376-235028390
TTCTTATCTAGAACTTGTTAGAACTAATCA235028376AGGTCAAAGTGACCTCTTCATACCCCTCCCTACATAGAGGACACA
chr1:237271657-237271671
GAGACAAAAACAATGACTAGGACAAATGAG237271657AGGTCAAAATGTCCTCATAGAGGCTTGGCTGGAGGATGCTGCGTT
chr1:238703102-238703115
ATTTCTAAGTGAATTATGAAGTTTAATTTG238703102AGGTCAAAATG-CCTTTAGTTGATACTCATGTTTGTAATCAAAAT
chr1:245765998-245766011
GATCACCTTGTACGATCCCCTGACTTGTGG245765998AGGTCAAAATG-CCTTCCAAAAGAGAGGCAACCAGGTTCCTCCAA
chr2:4274978-4274992
GCCCGCTTTGTAAAATAAGGTTACAATTGA4274978AGGTAAAAATGACCTATAAACAGAGAATTGTAATACTTACAATAA
chr2:8684326-8684339
GAATCGCAGCCGGCAGAGCCTGCGCTGTTG8684326AGGTC-AAATGACCTGCTGGCCGTGCATTGCCTCACCCGGCTCCC
chr2:11653035-11653049
ATGGCTTAAGACTTATAGACAAAGATAATC11653035AGGTCAAAATGACCTTCTTTCAGTTGTTGGGGCAGTGAGGGTGGA
chr2:22556548-22556561
TTTTTCACCATCCAGCTGAAAGGATAACAC22556548AGG-CAAAATGACCTCTCTAAGAACGTTAGCAGACAACAGATAGC
chr2:24784106-24784120
ACTAATAAAAGTGGTAACCTACAGTAAGCA24784106AGGGCAAAATGACCTGCATGTGGATGATGTGGGAATGAGACTTCT
chr2:37894975-37894989
CCCATTGGTGGGGGTGTGGTATTTAGTATA37894975AGGTCAAAAAGACCTGAGTTCAAACCCTGCTTCTGCTATTTAGCT
chr2:41020795-41020809
GGAAATGTTTAAACACTTGTCACAGTCTGA41020795AGATCAAAATGACCTGGACAAGTTATATCCTTTAGCAGAAATTGA
chr2:42981403-42981418
GAAGAACTGCTGCCAGGTGGGTCCTACAGC42981403AGGTCACAAATGACCTAGTTTCATTTTAAGCAGACAGACTCTGTTT
chr2:43978220-43978233
TGTGCCTCAGGTACCCTGTATGTGAAACGG43978220AGGTCAAAATGA-CTCCCACCTCTAGGGTTGTCTGAAGGATTAAA
chr2:59142534-59142547
TCAAGCTGCAGATCTCTCCTTCCTTTTGGC59142534A-GTCAAAATGACCTGGCTGATTTGTCCACTCTGCCTCCATCCCA
chr2:61273524-61273537
ACCAAGTCACTGATACTTTTTAATGACTCT61273524AGG-CAAAATGACCTTTTCCTTCACCCTTCCTGAGTAATGATTAT
chr2:61882618-61882632
GAATTTCATTTTCTGCTTTTAAGATCACAA61882618AGGTCAAGATGACCTTCTTACACCTGTTGTTTTTTAAGTGTCTTT
chr2:67901406-67901420
TTCTCTAAGATGGCTGAGAGGGCACATGAC67901406AGGTCAAAATGACCCACCATGCACAGTGCTCAGAACATACTTACA
chr2:78878440-78878454
CCTGATACTCCACTGAAACAGCTCACGTTA78878440AGGTCATAATGACCTCCATTTGCCAATTATAATATTTGAGTCTCA
chr2:97281269-97281283
AATATCTGCGAATTCCATGCTACCCACAAA97281269AGGTCAAAATGACCTAGGGGAAAGGAAAAATGTTTAAATATTAGA
chr2:100264561-100264575
CCTAAAATAGGTTTTGATTCATTCTACTAA100264561AGGTCATAATGACCTTTTTTTTCCTGTATTTATATGTGTAGCTTT
chr2:101129865-101129878
TCTCAATAATCATGTGACACTACCTACCAC101129865AGGTCAAAAT-ACCTATGAGATGCTTTGAAGAGTCAGAACTGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/hg19/1/AGGTCAAAATGACCT
lang : ja | db : hg19 | k : 1 | strand : | nogap : | query_string : AGGTCAAAATGACCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.530 | 0.521 | search_plus_done; http://172.18.8.78:28018/match?q=AGGTCAAAATGACCT&k=1&no_gap=0&offset=0&limit=50
0.976 | 0.446 | search_minus_done; http://172.18.8.78:28018/match?q=AGGTCATTTTGACCT&k=1&no_gap=0&offset=0&limit=0
0.976 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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