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2025-04-05 10:34:22, GGGenome : Actinidia chinensis genome

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Chr01
position: 15707602-15707616

AATACTATTTAACAGGAAAAACTTATGTAT15707602TTCATTGACAACATTAAATAAGGATTACAGTCAAGTAACGTACCA

Chr29
position: 6249531-6249545

CGAGATGCTGAAGGGCAGGATGTGCTGCTC6249531TTCATTGACAACATTTTCAGGTTTACCCAGGTGGGATTGCTTTTT

Chr13
position: 17114939-17114953

TTAAAGAAAGCCCACCTGGGTAAACCTGAA17114939AATGTTGTCAATGAAAAGCAGCACATCCTGCCCTTCAGCATCTCG

Chr23
position: 13443795-13443809

ACAGATCAAAAAAACTGACGCCAGGGGCAA13443795AATGTTGTCAATGAAAGTATGGGAGTAGTTTGATTGGGTAAGCCC

Chr24
position: 15777400-15777414

AGGGATCAACATAACCTGAGGCCTGAACAA15777400AATGTTGTCAATGAATAATTTCTATATTCAGATGTTTTGGTTATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.72:28281/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.086 | 0.005 | search_minus_done; http://172.18.8.72:28281/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.089 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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