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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2024-03-28 21:08:53, GGGenome : Cucumis melo genome, v3.6.1 (Jul, 2017)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

chr00
position: 18029381-18029395
AAGGATTTTTTAGACACGTTCGTCATAGTT18029381TTCATTGACAACATTTTGATTTACTTTTGTTTGCTTTGTTTGCAA
chr01
position: 888632-888646
TTTTTTTTCCCTTTAATGAATAATTAAACT888632TTCATTGACAACATTTGGGAGTAAAAACCTCTTTCTATTCAATAA
chr03
position: 12295784-12295798
AATTCTTCCGCTGTAAAGAGTTTTCATCCC12295784TTCATTGACAACATTATGTTTGGTGGAATGTCTCAGGAGATGATT
chr09
position: 20530735-20530749
TTTTGGCATATTTACCTGGGTAAAGCGGAA20530735AATGTTGTCAATGAAGAGAAGCACATCCTGTCCTTCAGCATCACG
chr11
position: 5571537-5571551
ATGCTCAGCCTCAATTTTGGAGTAAATCAA5571537AATGTTGTCAATGAAAACTATGACGAACGAGTCTAGGAAGTCCTT
chr12
position: 15352520-15352534
TCCAAGATTGTAGAAATGATAGAAAGAAAT15352520AATGTTGTCAATGAATTTCGAACTTTTGTGGTTTGATGATGATGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ja/CM3.6.1/TTCATTGACAACATT
lang : ja | db : CM3.6.1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.078 | 0.070 | search_plus_done; http://172.18.8.72:28210/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.005 | search_minus_done; http://172.18.8.72:28210/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=47
0.086 | 0.002 | cgi_end;

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