GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-03-28 18:04:36, GGGenome : Daucus carota genome, v2.0

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

DCARv2_Chr5:31546626-31546640
CTCATTACATAAGCTTCCGCTAAGCCATGA31546626TTCATTGACAACATTTTTATGTGTTTCAAACGACTGCAGTATTGT
DCARv2_Chr6:17071605-17071619
AATGCATAATAACAACTCCATAACTGCACA17071605TTCATTGACAACATTTTAACACATAGCATATAATCAAAACTGGTG
DCARv2_Chr6:17073275-17073289
AATGCATAATAACAACTCCATAACTGCACA17073275TTCATTGACAACATTTTAACACATAGCATATAATCAAAACTGGTG
DCARv2_Chr7:12985840-12985854
CGGAAGATATTTTAAAGAACAATCAGCATG12985840TTCATTGACAACATTGGACCATAGTTTTCCTTCGGTACTAGATAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/Dcarota_v2.0/TTCATTGACAACATT
lang : en | db : Dcarota_v2.0 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.72:28298/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.088 | 0.006 | search_minus_done; http://172.18.8.72:28298/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=46
0.088 | 0.000 | cgi_end;

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