GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-12-27 21:29:41, GGGenome : Fragaria vesca genome, v1.1

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

unanchored:1281126-1281140
CATTCCAAGTGATGGTGAATGGTCATGCTG1281126TTCATTGACAACATTAGAATTCCTGGCCTTCCCCATGTCCAAATC
LG6:6670666-6670680
TAGCCGATCACCAGAACCTCGATCCAGATC6670666AATGTTGTCAATGAAAATGGAAGCGGCTGTCCCAAGTAAGACGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/Fvesca_v1.1/TTCATTGACAACATT
lang : en | db : Fvesca_v1.1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.080 | 0.071 | search_plus_done; http://172.18.8.74:28300/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.004 | search_minus_done; http://172.18.8.74:28300/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.084 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).