# [ GGGenome | 2024-12-27 16:22:08 ] # database: Aardvark genome, OryAfe1.0 (May, 2012) # query: TTCATTGACAACATT # count: 13 # query: AATGTTGTCAATGAA # count: 12 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins scaffold:OryAfe1:JH863720.1:1:38460149:1 scaffold JH863720.1 + 6610289 6610303 TGAGACGAAGCCTCACCAATCCTCCCTTCTAAGGAGCATTCTGGCTGTACTTCCTCCAGGACGAACTTGTTGCTTCTGGCAGTGCATGGTATATTCAGTGTTCATTGACAACATTACAATTCAAAGGCATCAAATCCTCTTCGGTCTTCCTCATTCACTGTTCAGCTTTCCCACGCATATGAGGTGACTGAAAATGCCATGGCGTGCGTTAGGCT 6610189 6610403 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863719.1:1:40202977:1 scaffold JH863719.1 + 5372705 5372719 ATTCCTCACTCAAAAAAGCTTTTGAGATTCCAAGTGCATATCAGCCAAATTACTTCATCCAGGCTCATATCCTCAGGAAGCCCATATTTCCCAGATCCTGTTCATTGACAACATTTCCAGGATGAGCACCATAGCAATCAGGATGTTGCCCACCTATCTCATTCCTTCCTCACACATGTCATATGTATTTGCATAATATCAAATACATTCACTGT 5372605 5372819 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863768.1:1:15573907:1 scaffold JH863768.1 + 9149412 9149426 TCAACCTTATACATGTTGTTGGGTACACCACCCGCTTCATAGACATACCTAATAGTTCAGCCTGTCCAGCCATCTATCCACCTGTACACCCATGTTTGTCTTCATTGACAACATTGTACTATATGTGCAAAGGGGTTCATCTTTGTTGTCTGTACCTCCCATGTACCGCTCCATGTCTTTCTCTTCCTCGGTGTCACTATATTGATCACTCACAT 9149312 9149526 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863791.1:1:12356756:1 scaffold JH863791.1 + 5546777 5546791 TTTGGAGAATATGAAGTAATTTGTTAAGCAATCTAATTTATTCCACCTAATGTTAGGCAACTCTTGGAGTCTTCATCACTTCTAGCTCTAACCATTTACTTTCATTGACAACATTACCTACACATGTTGGTACATCATTTTCTATAAATTATGGACAACACAAATAGCAGTGTATAATATCCCTACTTAAATAAATATGTATTATTTATAGTGTC 5546677 5546891 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863791.1:1:12356756:1 scaffold JH863791.1 + 9657710 9657724 AAAAAATCATCAATTTCTTCATCTTTGACTGTGGTAGTTGGTGTGTAAATTTGAATAGTAGTGTAAATTGTTCTTCCTTGTAAGAATTTGAGTATTATCTTTCATTGACAACATTGTAATTCAGGATAGATCTTAAAATATTATTTTTGAGGATGAATGCAACATGATTCCTCTTCTATTTGTCATTTCCAGCATAGTAAAAGAAATGCAATGCC 9657610 9657824 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863859.1:1:8596878:1 scaffold JH863859.1 + 519918 519932 AACTCTGAGGCTACTGCAAAGCTCTTTAACTCTTTGTTGTGATAGAATTTGGGGAGACTTTAATTTCCTTAATATCCCAAATAATACTATACCTTTCTATTTCATTGACAACATTATGCTAACTAGACTTCATGAGCAGACAATAACAAACTTTCTAGATCCTTTAATAATATTTATCGTTGCCAGAAGGCAAGAGAGAAACTCTGAAAGTTCAA 519818 520032 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863928.1:1:6374974:1 scaffold JH863928.1 + 3705413 3705427 TTGTAATTAAAGGGATTAACTAATCAAAATATCTGGTTATACAGGGGAGAGGAAAGAGACCAAACTTGAAGTTGACACTCTTTAAACAGTGACTAAAAGATTCATTGACAACATTGTTCTATTAAACAGGTCAGAATTGCTTCCTCATAAAACATTGTATTATAACAATTAGAACATTGTAATGTAGTCTATTCCCTAGAATGTAATTTTTAAAA 3705313 3705527 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864023.1:1:4337110:1 scaffold JH864023.1 + 1031271 1031285 AAATCTTTAAATTCTTTATCTTTGGCTTTAGTGGCTTTTGCATAAATTTGAATAATAGTAGTATTAACTGCTTTGCCTTGTAGGCATATGATTATTTCTTTTCATTGACAACATTGTATTATAGGATAGATCTTGAAACATTCTTTTGATGAAGAATGTGAGGCCATTCCTCTTCAATTTGTCATGTCTGCCATAGCAGATCATATGATTGTCTG 1031171 1031385 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864033.1:1:4286233:1 scaffold JH864033.1 + 3184595 3184609 AATTTCCAATTTCTTTATCTTTGGCTTTAGTGGTTGATGCATAAATTTGAATACTAGTTGTATTAACTGGTCTTCCTTGTAGGCATATAGATATTATGCTTTCATTGACAACATTGTATGTAAGGATAGATCTTGAAATATTCTTTTCGATGATAAATGGGATGTCATTCCTCTTTAATTTGTCATTGTCAGTATAATCAACTATATGATTGCCT 3184495 3184709 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864065.1:1:3625835:1 scaffold JH864065.1 + 675769 675783 TTACTTCTAAAATATAAACTTGAGACATAATAGAAGCCAAGGATTTAACTCTATGTCTTTCTACTAGTGGAAAGCATAGAAAATTAAAGTACTAAACTTGTTCATTGACAACATTTTTAATTTTTTTGTCCTCTGTACTTCAAACACCCACTCTACTGTAGCATACAGTTAATAACTTTGTGAAACTAGTTGGCCATCAAGTCACTTCTGATTCA 675669 675883 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864144.1:1:2702783:1 scaffold JH864144.1 + 167337 167351 TGCTCTCGTGCAGAATAACAATGCTTTAGTTCTTTGGGGGTGAATAGCCCTGAGTCACCCTGCAAAACAGCACGTGACTGCTATTGACACCATGCAGGATTTCATTGACAACATTTACTTCTGATGACAGAGGTTTATTCATGAGGTTAAGCTGCTATTCAAAGTCCACCTGAACTGGTTTGTGTCTCCACCATGGAAGTGACGTAGTGGCCTTA 167237 167451 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864175.1:1:2487417:1 scaffold JH864175.1 + 835684 835698 CAGTTGCTGGCAAAGCATTTCAGGTAAAAACATAAGACATGCAAAAAATATACAGCATATGGTATTGTTATTGGACTGCAGATTCAGAGGCAATGACTGTTTCATTGACAACATTTCATAAACCCTTGATTTTAATGCCCTTTGTATAAGTTTTCCTTTCCTAGTCTTTTAATTTTTAGCATTGATTTTCTTCCTTCTATGTCTCATTCTTGTTT 835584 835798 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864438.1:1:1063986:1 scaffold JH864438.1 + 564515 564529 GATAAAAATCTTCAATTTCCTCATCTTTAGTGATTGGTGCATAAATTTGAGTAATAGTCATATTAATGGGTCTTCCTAGTAGGCATATGCATATTATCCTTTCATTGACAACATTGTACGTTGTATTTCTATATAATAGGAATATTCTTTGTACTTGAAGAAATTTAAATATAAGGAGGATAAATTGTTGACTAAGTTTACCAAGTCAATATTCA 564415 564629 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863747.1:1:19260028:1 scaffold JH863747.1 - 4771731 4771745 TCTAGTTTTAAGAGGTTTACTTTCTTCATCTATTAAGTTGATACTTTTTGTTATTTCTCCTTTAATCTTTCAATGTGGTTAATTACATTCATTGGTTTTAAATGTTGTCAATGAAGCAAAGAGAATACTGAAAAGGAGATCAGAAAAGCAATACCATTTATAATAGCCACCTAAAACATGATCAATCTAATCAGAGATACACAAGAACTATAGAA 4771631 4771845 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863759.1:1:16595691:1 scaffold JH863759.1 - 6888877 6888891 GAATTTTCTTTGAAGGAAATTGGAAAAAATAATAATCTCTTAATGCTATTACGGTAATTCTGATGAAAATGCCTGTTTTTCATATGCATATGTAATAGTGAATGTTGTCAATGAAAATACAATAGTATTTGGAGCGCAGCATACTGGAAAAGGTTGGCAAGGTTATTGAAACTGAGTGTAATTGTCTTCCAAGTGCCTGGATTAATTCATAGAAA 6888777 6888991 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863777.1:1:13420349:1 scaffold JH863777.1 - 12421864 12421878 TCTCCCTAAATCAAGACACCAAAAAGATGCTTGATTTATACACGTTAAGAGCTAAAGGCAACTGAGTAACAAAAGAAAAACTATAAGCTTATACAGTCAAAATGTTGTCAATGAATATTTTTATCCATCTTATTAGCCTTAGCCTTTTATTTGACAATGAAAATATTTGAACTGTAGCGGCCTAAATATATATTTTTCAGAACTGTATGTATTTG 12421764 12421978 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863809.1:1:11063368:1 scaffold JH863809.1 - 4787753 4787767 TAGAATGACTTTCAAGGAATGCAATATGAGAAAATAATTACCATATACTTTTGTTCAGGAATCAAAGGATGAACAATGGAAACGAGCTATGGATTATTTAAATGTTGTCAATGAACTCAACTACATGACTCAAATTGTTATCATGCTTTACGAGGATCCTAACAAGGTAATGATATGCTGTGGTGGTGTAGTGGTTAGGGCATTTGCCTGCTAAC 4787653 4787867 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863809.1:1:11063368:1 scaffold JH863809.1 - 10073530 10073544 AAGACCTCTTCAAAATGTTAAAGAGCAAAGATGTCGCTTTGAAGGCTAGGGTGCAACTGACTCAAGCCATTGTCTTCTCAATAGCATCACATGCACTAGAAATGTTGTCAATGAATAAGAAAGACCACAGAAGAACTGATGTGTTGGAATTATGATGTTGGTGAAGAATACTGGATACACCATGAACTTCCAGAATAATGAACATATTTGTCTGG 10073430 10073644 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863816.1:1:10536798:1 scaffold JH863816.1 - 3937241 3937255 TTCTGCCGTGGAACAGCTGGTGGATTCAAATCATCAACCATTTGGTTAGCAATCAAATGTTTTAACCACTGCACCAGACTAAGCTCCTAAGTTCTATTTGAATGTTGTCAATGAAAGACAAGCAAGTGAAGTAAATGAAGAGAAATAAGAGTTTTATAGGTACAAACCCAGACATAAATTCACTGAATAATAGGGTGTGTACAAGCTCAACTTTA 3937141 3937355 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863820.1:1:10350141:1 scaffold JH863820.1 - 6439904 6439918 CATTATCACTTTCCTGGGTGTAACTAGTAGGATGAACTAGTCCAAACGTATGCAGATGTAGAGTTCTGCAAGTGCAAATTACATTTTATTTTACTTCAGTAATGTTGTCAATGAAAAGCGAAAATATTGCAGATTATATCAAAGGTTTAGCTGCAGAGTATGTTAGAATTTTAGAAATGGCTAATAATGCCCATGACAAATGTTGTAGTGATAAT 6439804 6440018 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863832.1:1:9740889:1 scaffold JH863832.1 - 6756971 6756985 CATCTCCTGTTAAATAAGTAGTTTCTGCTCAGTTCCCGGGAAAGCACACAGATTAAAATATAAACCGTGGAATTTTTCTGTGCTAAGGTAATATAACGAAAATGTTGTCAATGAAAATTTAATGCTTTGTTGTGTGAACAACAAAGTCAGAATCTCTGTTATTGATGATTTCCTGTTCTTTTCGTAATCCCTTGTTCAACCATCCCCAATCTTCT 6756871 6757085 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH863965.1:1:5224222:1 scaffold JH863965.1 - 1970149 1970163 AGACAATTGTATGGTGTACTATGCTGAGAATGACCAACTGAAGAGGAATGGGGTTGCATTCATCGTCAAAAACAACATTTTAAGATCTATCCTGAAGTACAATGTTGTCAATGAAAGGAAAATATCCATATGCCTATAAGGAAGACCAGTTAATACTACCATTATTCAAATTTATACACCAACCACTAAAGCCAAAGGCAAAGAAATCTAAGATT 1970049 1970263 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864026.1:1:4330867:1 scaffold JH864026.1 - 724347 724361 ACCACTTGAAAGACTGAAGAGTGCATTCTGGTCATATTATAGTGTTTTTTGTGATGTGTTAACAACTGTAAAGAAGGACAGCAGTTGTGGACTGGGGTGGAATGTTGTCAATGAAAATCCAGTCTCCTAAATGGTAGGATTTTGTGTTGTAACATGACAAAAAGTTCCCTTGATTAAGATTCCAGACAAGTAATTCTTTAGTAGGATTTCAAATA 724247 724461 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864417.1:1:1096918:1 scaffold JH864417.1 - 599787 599801 TGGACAACCTGAACATGGCAGGTGACAGCATATCAGGCTTTCCATTTTTTTCAAGAAAAAACCTGAAATCTGGATATGTATAAGAAAATTCCCAATTTTAAATGTTGTCAATGAATTCAAAATATTTCAAAACACTGTGTAGAACTAACAACACGTCTCTGAAAGTAAAGTGGCCTCAAACTGCCAGTGTCTTGATCAAATGCCAAATCCAGGCC 599687 599901 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 scaffold:OryAfe1:JH864573.1:1:750449:1 scaffold JH864573.1 - 129193 129207 AGAAAACCTTATGATCTACTATGCCAGGAATGACAAATTGAAGAGGAATGGCATGGCATTCACCATCACAAAGAATGTTTCAAGATCTATCCTGAAGTACAATGTTGTCAATGAAAGAATAATAGCCATACTTCTCTAAGGAATACCAATTAATAATACTATTATTCAAATTTATGCACCAACCACCAAAGACAAGAGAATGAAAGATTACCAGC 129093 129307 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0