GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-21 19:47:24, GGGenome : Arabidopsis thaliana genome, TAIR10 (Sep, 2010)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

5 dna:chromosome chromosome:TAIR10:5:1:26975502:1
position: 2827385-2827399
CGTGATGCTGAAGGCCAAGATGTCTTGCTT2827385TTCATTGACAACATTTTCCGTTTCACTCAGGTAAGCCTTGTTATG
5 dna:chromosome chromosome:TAIR10:5:1:26975502:1
position: 2819478-2819492
AGGAACAAGGCTCACCTGAGTGAAACGGAA2819478AATGTTGTCAATGAAAAGCAAAACGTCTTGGCCTTCAGCATCACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/TAIR10_en/TTCATTGACAACATT
lang : en | db : TAIR10_en | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.080 | 0.072 | search_plus_done; http://172.18.8.75:28169/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.004 | search_minus_done; http://172.18.8.75:28169/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.085 | 0.001 | cgi_end;

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