# [ GGGenome | 2024-05-15 12:12:23 ] # database: Rabbit pre-spliced RNA, RefSeq on UM_NZW_1.0chr, D3G 23.02 (Feb, 2023) # query: TTCATTGACAACATT # count: 10 # query: AATGTTGTCAATGAA # count: 9 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins XM_051850472.1|LOC100357836;100357836|chr8:9636919:10046910:-|prespliced::chr8:9636919-10046910(-) + 2812 2826 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 2712 2926 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_008260152.3|LOC100357836;100357836|chr8:9636919:10068464:-|prespliced::chr8:9636919-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850465.1|LOC100357836;100357836|chr8:9636919:10068464:-|prespliced::chr8:9636919-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850466.1|LOC100357836;100357836|chr8:9636919:10068464:-|prespliced::chr8:9636919-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850468.1|LOC100357836;100357836|chr8:9636919:10068464:-|prespliced::chr8:9636919-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850469.1|LOC100357836;100357836|chr8:9636919:10068464:-|prespliced::chr8:9636919-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850470.1|LOC100357836;100357836|chr8:9636919:10068464:-|prespliced::chr8:9636919-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850471.1|LOC100357836;100357836|chr8:9699885:10068464:-|prespliced::chr8:9699885-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051850473.1|LOC100357836;100357836|chr8:9699885:10068464:-|prespliced::chr8:9699885-10068464(-) + 24366 24380 TCCAGAGAGCATGGGCGTCCTACAAGTAGTTCAGCCATTTTTTTCTTCCAAGAAACACTGTTAGTCTTTCTCATTAGCATAATAGGTTTCAGAAAAGGTTTTCATTGACAACATTAGTGATAGTCAAGATATGTGTATTGCCTGTTATCTTCGAGAACTCAGCCCTTGTGTTAACACACTAGTATAACAATCAATGTTTGACCTTAGTTTTTTTT 24266 24480 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_002713403.4|LOC100008708;100008708|chr9:92029629:92032404:+|prespliced::chr9:92029629-92032404(+) + 30 44 GAATGCTACACTCCAAATACTATTGTGTTTTCATTGACAACATTCACTATTACATATGCATATGAACACCAGTCATTTTCATCAGAATTGCTGTAATAGCATTAAGAGATTATTATTTTTTCCAATTTCCTTGGAAGAAAATTC 1 144 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 XM_051847092.1|C1H9orf153;100342003|chr1:86246548:86253126:-|prespliced::chr1:86246548-86253126(-) - 5810 5824 GGCGCAGAGGTCACTCTGAGGAGTTGAATGTTAACTGCATAGAGACCTGGGAACAAAACAAGTTTGGAGAAGAAACACATTGGGAATCTTGGAAGTGGAAAATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTACGCTCTCTGCCTGTGAGGAGGACGGACTAATAAGCTGGGGAATCAGACCGAGAAGCCTCGAGATCGCAGC 5710 5924 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_008257491.3|C1H9orf153;100342003|chr1:86246548:86273702:-|prespliced::chr1:86246548-86273702(-) - 26386 26400 GGCGCAGAGGTCACTCTGAGGAGTTGAATGTTAACTGCATAGAGACCTGGGAACAAAACAAGTTTGGAGAAGAAACACATTGGGAATCTTGGAAGTGGAAAATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTACGCTCTCTGCCTGTGAGGAGGACGGACTAATAAGCTGGGGAATCAGACCGAGAAGCCTCGAGATCGCAGC 26286 26500 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_051847101.1|C1H9orf153;100342003|chr1:86246548:86273702:-|prespliced::chr1:86246548-86273702(-) - 26386 26400 GGCGCAGAGGTCACTCTGAGGAGTTGAATGTTAACTGCATAGAGACCTGGGAACAAAACAAGTTTGGAGAAGAAACACATTGGGAATCTTGGAAGTGGAAAATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTACGCTCTCTGCCTGTGAGGAGGACGGACTAATAAGCTGGGGAATCAGACCGAGAAGCCTCGAGATCGCAGC 26286 26500 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_008257487.3|C1H9orf153;100342003|chr1:86246548:86276381:-|prespliced::chr1:86246548-86276381(-) - 29065 29079 GGCGCAGAGGTCACTCTGAGGAGTTGAATGTTAACTGCATAGAGACCTGGGAACAAAACAAGTTTGGAGAAGAAACACATTGGGAATCTTGGAAGTGGAAAATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTACGCTCTCTGCCTGTGAGGAGGACGGACTAATAAGCTGGGGAATCAGACCGAGAAGCCTCGAGATCGCAGC 28965 29179 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_051847112.1|C1H9orf153;100342003|chr1:86246548:86276382:-|prespliced::chr1:86246548-86276382(-) - 29066 29080 GGCGCAGAGGTCACTCTGAGGAGTTGAATGTTAACTGCATAGAGACCTGGGAACAAAACAAGTTTGGAGAAGAAACACATTGGGAATCTTGGAAGTGGAAAATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTACGCTCTCTGCCTGTGAGGAGGACGGACTAATAAGCTGGGGAATCAGACCGAGAAGCCTCGAGATCGCAGC 28966 29180 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_008257472.3|C1H9orf153;100342003|chr1:86246548:86287979:-|prespliced::chr1:86246548-86287979(-) - 40663 40677 GGCGCAGAGGTCACTCTGAGGAGTTGAATGTTAACTGCATAGAGACCTGGGAACAAAACAAGTTTGGAGAAGAAACACATTGGGAATCTTGGAAGTGGAAAATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTACGCTCTCTGCCTGTGAGGAGGACGGACTAATAAGCTGGGGAATCAGACCGAGAAGCCTCGAGATCGCAGC 40563 40777 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_051854304.1|LOC100340498;100340498|chr12:28690181:28936512:+|prespliced::chr12:28690181-28936512(+) - 174126 174140 AAATAAAATCTTTATAAAAATTATTTTAGGCTGAGGGGAGAGTGATATGAACTGAAACAGGCAGTCCTAGCTGTAAAAATGGCTTGAAGATTGTTTAGTCAATGTTGTCAATGAAAAAAAAATGGCTTCTGTAATCAAGCTTAATACTGTAATAAAGCCATTAATGACCCATCCTCTTTTTTTAATTTCCATGAAAAAAAAAGATACAAATCATT 174026 174240 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_017349189.2|LOC100356654;100356654|chr19:38697358:38714878:+|prespliced::chr19:38697358-38714878(+) - 5247 5261 ATCTCTCTTTCTCTCTCTGTGTAACTCTGACTTCCAAATAAATAAATCTTTTTTAAAAATTATTTTAAAATCTCCTTTATCTTTTACAAGTTTATAGTAAAATGTTGTCAATGAAATCATACAATGACTGGATTTGCTCAGAAATAATCTGGCTGGAGCTTTGTGGCTATAAAAGAAACAAGATGGGCCCTGAGGTGGTATATAACGCAGCTGTG 5147 5361 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 XM_051825651.1|LOC100356654;100356654|chr19:38697358:38714878:+|prespliced::chr19:38697358-38714878(+) - 5247 5261 ATCTCTCTTTCTCTCTCTGTGTAACTCTGACTTCCAAATAAATAAATCTTTTTTAAAAATTATTTTAAAATCTCCTTTATCTTTTACAAGTTTATAGTAAAATGTTGTCAATGAAATCATACAATGACTGGATTTGCTCAGAAATAATCTGGCTGGAGCTTTGTGGCTATAAAAGAAACAAGATGGGCCCTGAGGTGGTATATAACGCAGCTGTG 5147 5361 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0