GGGenome | Results

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2025-04-05 03:57:37, GGGenome : Golden eagle genome, aquChr-1.0.2/aquChr2 (Oct, 2014)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

KN265692v1:8019863-8019877

GATCTAGTATTTTGTCCCATCTAAAAACTG8019863TTCATTGACAACATTAAGGAACACTGTCTGAATGCTGAAGCCATC

KN265795v1:525652-525666

TACAGTACTCTAAATAACTCACTGTAATAT525652TTCATTGACAACATTATTTTGTGCATTGTATGGTTCTTGTAATTT

KN265812v1:166390-166404

CATGATAACAATCTGTGTCATGTAATTGAG166390TTCATTGACAACATTTAAATAATCCATTGCTCGTTTCCATTGTTC

KN265653v1:6072095-6072109

CCCTGCCACAGTTTGCCCACTGCTAGCTTG6072095AATGTTGTCAATGAACACTGTAGAAAGGTGTGATGTTGCTGTGCT

KN265663v1:2926063-2926077

GTTAAAAATATATATATGCAGCTTAAAGGA2926063AATGTTGTCAATGAATAAAATAATTATTAAAATATCAGTAATTGT

KN265693v1:7229413-7229427

TTGTTATTAAATGATGGACATTGGACATCC7229413AATGTTGTCAATGAAAAGTATTATTAAAATTCATGTTCTAGATAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.080 | 0.071 | search_plus_done; http://172.18.8.76:28760/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.004 | search_minus_done; http://172.18.8.76:28760/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=47
0.085 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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