# [ GGGenome | 2025-04-19 10:06:08 ] # database: DDBJ release 134.0 (Mar, 2024) # query: ACAAATCTGATGTCCCAAACGC # count: 13 # query: GCGTTTGGGACATCAGATTTGT # count: 15 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins DK463375|DK463375.1 Brassica oleracea var. viridis mRNA, clone: KALE-020H15, 5' end sequence. + 465 486 GCAGAAGAAGACAATGATGATGATCAGATGAAACTTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTACTTCAAGAAACAAGGGATAAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAATTGTAAGGAGAGGACAGGAGTTAGGGAGCGTTTGGATACACCAATGGCCAATCAGACATTTCCTTCTTGGATCAATGGAGGAGAT 365 586 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 EW716024|EW716024.1 RS1AP35TFB RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. + 254 275 TGGAAGAACAAAGGTGATGATGATCAGGTGAATATTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTAGGGATGAACAAATCTGATGTCCCAAACGCACCACATTTGGAGAACTGTGAGGAGAAGACACGAGCTAGAGAGCGCTTGGATACAAGAAAATCAAACCATGCATTTCCCTCTTGGATAAACGGAGGAGAT 154 375 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 FG561576|FG561576.1 BN18DYSC_UP_098_H10_07MAR2008_066 BN18DYSC Brassica napus cDNA 5', mRNA sequence. + 364 385 CCAGAAGAAGAAAATGATGATGATCAGGTGAATCTTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTATGGATGAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAACTGTGAGGAGAGGACACGAGCTAGAGAGCGCTTGGATACAAGACTATCAAATCATACGTTTCCTTCTTGGATCAATGGAGGAGAT 264 485 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 FX695517|FX695517.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_20148. + 672 693 CCAGAAGAAGAAAATGATGATGATCAGGTGAATCTTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTATGGATGAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAACTGTGAGGAGAGGACACGAGCTAGAGAGCGCTTGGATACAAGACTATCAAATCATACGTTTCCTTCTTGGATCAATGGAGGAGAT 572 793 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 FX695647|FX695647.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_23972. + 571 592 GCAGATGAAAATGATGATGACGATCAGGTGAAACTTTTGGTCTCTGCTTGGGACAATTTATTACTAAACAATGAAGACTACTTCAAGAAACAAGGGATAAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAATTGTAAGGAGAGGACAGGAGTTAGGGAGCGTTTGGATACACCAATAGCCAATCAGACATTTCCTTCTTGGATCAATGGAGGAGAT 471 692 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 FX732598|FX732598.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_57251. + 363 384 TGGAAGAACAAAGGTGATGATGATCAGGTGAATATTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTAGGGATGAACAAATCTGATGTCCCAAACGCACCACATTTGGAGAACTGTGAGGAGAAGACACGAGCTAGAGAGCGCTTGGATACAAGAAAATCAAACCATACATTTCCCTCTTGGATAAACGGAGGTGAT 263 484 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 FX752377|FX752377.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10297. + 389 410 GCAGAAGTAGACAATGATGATGATCAGATGAAACTTTTGGTCTCTGCTTGGGACAACATATTACTAAACAATGAAGACTACTTCAAGAAACAAGGGATAAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAATTGTAAGGAGAGGACAGGAGTTAGGGAGCGTTTGGATACACCAATAGCCAATCAGACATTTCCTTCTTGGATCAATGGAGGAGAT 289 510 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 JT789718|JT789718.1 TSA: Raphanus sativus RS05171 mRNA sequence. + 1481 1502 TGGAAGAACAAAGGTGATGATGATCAGGTGAATATTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTAGGGATGAACAAATCTGATGTCCCAAACGCACCACATTTGGAGAACTGTGAGGAGAAGACACGAGCTAGAGAGCGCTTGGATACAAGAAAATCAAACCATACATTTCCCTCTTGGATAAACGGAGGTGAT 1381 1602 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 CW988500|CW988500.1 KBrH015I17R KBrH, Brassica rapa HindIII BAC library Brassica rapa subsp. pekinensis genomic clone KBrH015I17, genomic survey sequence. + 359 380 ACACAAGTAGACAATGATGATGATCAGATGAAACTTTTGGTCTCTGCTTGGAACAACATATTACTAAACAATGAAGACTACTTCAAGAAACAAGGTATAAACAAATCTGATGTCCCAAACGCTCCACATTTGAAGAATTGGAAGGAGAGGACAGTAGTTAAGGAGCGCTTGGATACACCAATAACCAATCAGACATTTCCTTCTAGAGTATGCTATCTTCTT 259 480 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 CU695309|CU695309.1 Brassica rapa subsp. pekinensis clone KBrH066L21, complete sequence. + 30040 30061 GCAGATGAAAATGATGATGACGATCAGGTGAAACTTTTGGTCTCTGCTTGGGACAATTTATTACTAAACAATGAAGACTACTTCAAGAAACAAGGGATAAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAATTGTAAGGAGAGGACAGGAGTTAGGGAGCGTTTGGATACACCAATAGCCAATCAGACATTTCCTTCTTGGGTATGCTTTCTTCTT 29940 30161 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 AB608369|AB608369.1 Raphanus sativus DNA, microsatellite locus RM_1, cultivar: F1 hybrid of rat-tail radish and Harufuku. + 316 337 TGGAAGAACAAAGGTGATGATGATCAGGTGAATATTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTAGGGATGAACAAATCTGATGTCCCAAACGCACCACATTTGGAGAACTGTGAGGAGAAGACACGACTTCT 216 376 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 CP123891|CP123891.1 Brassica napus cultivar Xiang5A chromosome 16. + 66045485 66045506 GCAGAAGAAGACAATGATGATGATCAGATGAAACTTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTACTTCAAGAAACAAGGGATAAACAAATCTGATGTCCCAAACGCTCCACATTTGGAGAATTGTAAGGAGAGGACAGGAGTTAGGGAGCGTTTGGATACACCAATGGCCAATCAGACATTTCCTTCTTGGGTATGCTTTCTTCTT 66045385 66045606 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. + 42825071 42825092 TGGAAGAACAAAGGTGATGATGATCAGGTGAATATTTTGGTCTCTGCTTGGGACAACTTATTACTAAACAATGAAGACTATTTCAAGAAACTAGGGATGAACAAATCTGATGTCCCAAACGCACCACATTTGGAGAACTGTGAGGAGAAGACACGAGCTAGAGAGCGCTTGGATACAAGAAAATCAAACCATACATTTCCCTCTTGGGTGTGCTTTCCTCTT 42824971 42825192 ACAAATCTGATGTCCCAAACGC ACAAATCTGATGTCCCAAACGC |||||||||||||||||||||| ====================== 22 0 0 0 FX671549|FX671549.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_7550. - 1481 1502 ATCACCTCCGTTTATCCAAGAGGGAAATGTATGGTTTGATTTTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCTTCTCCTCACAGTTCTCCAAATGTGGTGCGTTTGGGACATCAGATTTGTTCATCCCTAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAATATTCACCTGATCATCATCACCTTTGTTCTTCCA 1381 1602 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 FX753363|FX753363.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_45686. - 150 171 ATCTCCTCCATTGATCCAAGAAGGAAACGTATGATTTGATAGTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCCTCTCCTCACAGTTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATCCATAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATCATCATTTTCTTCTTCTGG 50 271 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 AC234739|AC234739.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A02 clone KBrH014F10, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces. - 38899 38920 AAGAGGAAAGCATACCCAAGAAGGAAACGTATGATTTGATAGTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCCTCTCCTCACAGTTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATCCATAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATCATCATTTTCTTCTTCTGG 38799 39020 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 CP123879|CP123879.1 Brassica napus cultivar Xiang5A chromosome 4. - 3489053 3489074 AAGAAGAAAGCATACCCAAGAAGGAAATGTCTGATTGGCTATTGGTGTATCCAAACGCTCCCTAACTCCTGTCCTCTCCTTACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTTATCCCTTGTTTCTTGAAGTAGTCTTCATTGTTTAGTAATATGTTGTCCCAAGCAGAGACCAAAAGTTTCATCTGATCATCATCATTGTCTACTTCTGC 3488953 3489174 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 CP123885|CP123885.1 Brassica napus cultivar Xiang5A chromosome 10. - 54268517 54268538 AAGAGGAAAGCATACCCAAGAAGGAAACGTATGATTTGATAGTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCCTCTCCTCACAGTTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATCCATAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATCATCATTTTCTTCTTCTGG 54268417 54268638 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 HG994360|HG994360.1 Brassica napus genome assembly, chromosome: A06. - 39307478 39307499 AAGAGGAAAGCATACCCAAGAAGGAAACGTATGATTTGATAGTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCCTCTCCTCACAGTTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATCCATAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATCATCATTTTCTTCTTCTGG 39307378 39307599 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 HG994363|HG994363.1 Brassica napus genome assembly, chromosome: A09. - 3043623 3043644 AAGAAGAGTGCATACCCAAGAAGGAAATGTCTGATTGGCTATTGGTGTATCCAAACGCTCCCTAACTCCTGTCCTCTCCTTACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTTATCTGATGTTTCTTGAAGTAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGTTTCACCTGATCGTCATTATCATTTTCATCTTC 3043523 3043744 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 HG994373|HG994373.1 Brassica napus genome assembly, chromosome: C09. - 3118150 3118171 AAGAAGAAAGCATACCCAAGAAGGAAATGTCTGATTGGCCATTGGTGTATCCAAACGCTCCCTAACTCCTGTCCTCTCCTTACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTTATCCCTTGTTTCTTGAAGTAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGTTTCATCTGATCATCATCATTGTCTTCTTCTGC 3118050 3118271 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 LR031568|LR031568.1 Brassica rapa genome, scaffold: A09. - 2969787 2969808 AAGAAGAGTGCATACCCAAGAAGGAAATGTCTGATTGGCTATTGGTGTATCCAAACGCTCCCTAACTCCTGTCCTCTCCTTACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTTATCTGATGTTTCTTGAAGTAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGTTTCACCTGATCGTCATTATCATTTTCATCTTC 2969687 2969908 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 LR031569|LR031569.1 Brassica rapa genome, scaffold: A06. - 49363017 49363038 AAGAGGAAAGCATACCCAAGAAGGAAACGTATGATTTGATAGTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCCTCTCCTCACAGTTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATCCATAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATCATCATTTTCTTCTTCTGG 49362917 49363138 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 LR031875|LR031875.1 Brassica oleracea HDEM genome, scaffold: C9. - 3291993 3292014 AAGAAGAAAGCATACCCAAGAAGGAAATGTCTGATTGGCTATTGGTGTATCCAAACGCTCCCTAACTCCTGTCCTCTCCTTACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTTATCCCTTGTTTCTTGAAGTAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAATTTTCATCTGATCATCATCATTGTCTTCTCCTGC 3291893 3292114 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 LS974622|LS974622.2 Brassica rapa genome assembly, chromosome: A06. - 52979338 52979359 AAGAGGAAAGCATACCCAAGAAGGAAACGTATGATTTGATAGTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCCTCTCCTCACAGTTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATCCATAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATCATCATTTTCTTCTTCTGG 52979238 52979459 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 LS974625|LS974625.2 Brassica rapa genome assembly, chromosome: A09. - 3098165 3098186 AAGAAGAGTGCATACCCAAGAAGGAAATGTCTGATTGGCTATTGGTGTATCCAAACGCTCCCTAACTCCTGTCCTCTCCTTACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTTATCTGATGTTTCTTGAAGTAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAAGTTTCACCTGATCGTCATTATCATTTTCATCTTC 3098065 3098286 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 OU466858|OU466858.1 Thlaspi arvense genome assembly, chromosome: 2. - 4623621 4623642 GATGGAGAAACATACCCAAGGAGGAAATGTCTGATTCTCTATTAGTGTATCCAAACGCTCCCTAACTCGTGTGCTCTCCTCACAATTCTCCAAATGTGGAGCGTTTGGGACATCAGATTTGTTCATGCCTAGTTTGTTGAAGTAGTCTTCATTGTTTAGTAACAAGTTGTCCCAAGCAGAGACCAAAAGATTCACCTGATCATTTTCTTCTATCTCAGCTTT 4623521 4623742 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0 OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. - 10825428 10825449 AAGAGGAAAGCACACCCAAGAGGGAAATGTATGGTTTGATTTTCTTGTATCCAAGCGCTCTCTAGCTCGTGTCTTCTCCTCACAGTTCTCCAAATGTGGTGCGTTTGGGACATCAGATTTGTTCATCCCTAGTTTCTTGAAATAGTCTTCATTGTTTAGTAATAAGTTGTCCCAAGCAGAGACCAAAATATTCACCTGATCATCATCACCTTTGTTCTTCCA 10825328 10825549 GCGTTTGGGACATCAGATTTGT GCGTTTGGGACATCAGATTTGT |||||||||||||||||||||| ====================== 22 0 0 0