# [ GGGenome | 2025-04-04 07:15:10 ] # database: DDBJ release 134.0 (Mar, 2024) # query: ACTTCGACTATGCTCACTAC # count: 21 # query: GTAGTGAGCATAGTCGAAGT # count: 6 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins DK464974|DK464974.1 Brassica oleracea var. viridis mRNA, clone: KALE-024K11, 5' end sequence. + 326 345 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATTCCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCTACAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 226 445 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 DK472611|DK472611.1 Brassica oleracea var. viridis mRNA, clone: KALE-044K12, 5' end sequence. + 307 326 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 207 426 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 DK476182|DK476182.1 Brassica oleracea var. viridis mRNA, clone: KALE-053P23, 5' end sequence. + 307 326 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 207 426 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 DK500020|DK500020.1 Brassica oleracea var. viridis mRNA, clone: KALE-116E19, 5' end sequence. + 307 326 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 207 426 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 DY018504|DY018504.1 48RDOAM_UP_031_E09_13SEP2004_071 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence. + 316 335 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCTACAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 216 435 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 DY023705|DY023705.1 53COT5_T3_015_A06_05SEP2004_048 Brassica napus 36hr germinating seed library 53COT5 Brassica napus cDNA 5', mRNA sequence. + 315 334 TTGAAGGCTCAAGCTCGGTGCCCGCTTCAAGAACACTTTCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCTATGGACTTCGACTATGCTCACTACGCCCTCACCGAAGGTAGGAACGGGAAAGATCAGGTAGCAGCAGCTGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 215 434 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 DY026002|DY026002.1 47RDOAH_UP_005_C03_27JUL2004_027 O. Alba 47RDOAH Brassica oleracea cDNA 5', mRNA sequence. + 314 333 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCTACAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 214 433 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 EE552248|EE552248.1 BNQA_UP_070_E11_30MAY2005_087 Brassica napus BNQA Brassica napus cDNA 5', mRNA sequence. + 67 86 ACTTTCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCTATGGACTTCGACTATGCTCACTACGCCCTCACCGAAGGTAGGAACGGGAAAGATCAGGTAGCAGCAGCTGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 1 186 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 EL591049|EL591049.1 65JKBNMO_UP_052_B01_17JUL2006_013 65JKBNM0 Brassica napus cDNA 5', mRNA sequence. + 290 309 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 190 409 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 EV099646|EV099646.1 0179655 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence. + 263 282 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 163 382 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 EX059359|EX059359.1 BR044003 salt-treated whole plant cDNA library KBLS Brassica rapa subsp. pekinensis cDNA clone KBLS-057B09 5', mRNA sequence. + 226 245 TTGAAGGCTCAAGCTCGGTGCCCACTTCAAGAACACTTCCTTCCCCGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATTCCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCTCTTACCGAAGGTAGGAACGGGAAAGATCAGGTAACAGCAGCGGTAAGCTCACCGTCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 126 345 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 GR442924|GR442924.1 BNAOV1GH_T3_038_D02_12JUL2007_010 BNAOV1GH Brassica napus cDNA 5', mRNA sequence. + 271 290 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 171 390 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 GR445720|GR445720.1 BNAOV1GH_T3_111_A02_22SEPT2007_016 BNAOV1GH Brassica napus cDNA 5', mRNA sequence. + 294 313 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 194 413 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 AC189637|AC189637.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrS004O21, complete sequence. + 103754 103773 ACTGATCATGTGTATTTGATTCTTTCTTGCAACTGTGTATTGATTTGCTTTTTTTTATTCTATCAGCTTGACAGATTCATTCCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCTCTTACCGAAGGTAGGAACGGGAAAGATCAGGTAACAGCAGCGGTAAGCTCACCGTCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 103654 103873 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 AJ224078|AJ224078.1 Brassica napus mRNA with similarity to p55cdc and fizzy genes. + 283 302 TTGAAGGCTCAAGCTCGTTGCCCTCTTCAAGAACACTTCCTTCCCAGGAAGAGTTCCAAGGAAAACCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 183 402 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 CP123877|CP123877.1 Brassica napus cultivar Xiang5A chromosome 2. + 2284820 2284839 TGATCATGTGTATTTGATTCTTTCTTGCAACTGTGTATTGATTTGTTTTTTTTTAAATTCTACCAGCTTGACAGATTCATACCCAACAGATCAGCAATGGACTTCGACTATGCTCACTACGCTCTTACCGAAGGTAGGAACGGGAAAGATCAGGTAGCAGCAGCGGTAAGCTCACCCTCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 2284720 2284939 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 HG994355|HG994355.1 Brassica napus genome assembly, chromosome: A01. + 2227290 2227309 TGATCATGTGTATTTGATTCTTTCTTGCAACTGTGTATTGATTTGTTTTTTTTTAAATTCTACCAGCTTGACAGATTCATACCCAACAGATCAGCAATGGACTTCGACTATGCTCACTACGCTCTTACCGAAGGTAGGAACGGGAAAGATCAGGTAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 2227190 2227409 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 HG994365|HG994365.1 Brassica napus genome assembly, chromosome: C01. + 2835665 2835684 ATGTGGGTTTTGTAATAAGAAACTGATCATGTGTATTGATTTGCTTTTTTTTTTTAATTCTATCAGCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCAGCAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 2835565 2835784 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 LR031571|LR031571.1 Brassica rapa genome, scaffold: A01. + 2217905 2217924 CTGATCATGTGTATTTGATTCTTTCTTGCAACTGTGTATTGATTTGCTTTTTTTTATTCTTATCAGCTTGACAGATTCATACCCAACAGATCAGCTATGGACTTCGACTATGCTCACTACGCCCTCACCGAAGGTAGGAACGGGAAAGATCAGGTAGCAGCAGCTGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 2217805 2218024 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 LR031878|LR031878.1 Brassica oleracea HDEM genome, scaffold: C1. + 2784902 2784921 TTATGTGGGTTTTGTAATAAGAAACTGATCATGTGTATTGATTTGCTTTTTTTTTTATTCTATCAGCTTGACAGATTCATACCCAACAGATCAGCCATGGACTTCGACTATGCTCACTACGCCCTTACCGAAGGAAGGAACGGGAAAGATCAGGCTACAGCAGCGGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 2784802 2785021 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 LS974617|LS974617.2 Brassica rapa genome assembly, chromosome: A01. + 2218028 2218047 CTGATCATGTGTATTTGATTCTTTCTTGCAACTGTGTATTGATTTGCTTTTTTTTATTCTTATCAGCTTGACAGATTCATACCCAACAGATCAGCTATGGACTTCGACTATGCTCACTACGCCCTCACCGAAGGTAGGAACGGGAAAGATCAGGTAGCAGCAGCTGTAAGCTCACCATCCAGAGAGGCCTACAGGAAGCAACTCGCTGAGACGATGAACC 2217928 2218147 ACTTCGACTATGCTCACTAC ACTTCGACTATGCTCACTAC |||||||||||||||||||| ==================== 20 0 0 0 EE546153|EE546153.1 BCXiang2_FW_002_C06_06March2003_022 Brassica carinata - Xiang2 Brassica carinata cDNA 5', mRNA sequence. - 215 234 GGTTCATCGTCTCAGCGAGTTGCTTCCTGTAGGCCTCTCTGGATGGTGAGATTACCGCTGCTGTAGCCTGATCTTTCCCGTTCCTTCCTTCGGTAAGGGCGTAGTGAGCATAGTCGAAGTCCATGGCTGATCTGTTGGGTATGAATCTGTCAAGGTTTTCCTTGGAACTCTTCCTGGGAAGGAAGTGTTCTTGAAGAGGGCAACGAGCTTGAGCCTTCAA 115 334 GTAGTGAGCATAGTCGAAGT GTAGTGAGCATAGTCGAAGT |||||||||||||||||||| ==================== 20 0 0 0 EE547922|EE547922.1 BCXiang2_UP_028_E07_12March2003_028 Brassica carinata - Xiang2 Brassica carinata cDNA 5', mRNA sequence. - 207 226 GGTTCATCGTCTCAGCGAGTTGCTTCCTGTAGGCCTCTCTGGATGGTGAGATTACCGCTGCTGTAGCCTGATCTTTCCCGTTCCTTCCTTCGGTAAGGGCGTAGTGAGCATAGTCGAAGTCCATGGCTGATCTGTTGGGTATGAATCTGTCAAGGTTTTCCTTGGAACTCTTCCTGGGAAGGAAGTGTTCTTGAAGAGGGCAACGAGCTTGAGCCTTCAA 107 326 GTAGTGAGCATAGTCGAAGT GTAGTGAGCATAGTCGAAGT |||||||||||||||||||| ==================== 20 0 0 0 FX697536|FX697536.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_15587. - 1327 1346 GGTTCATCGTCTCAGCGAGTTGCTTCCTGTAGGCCTCTCTGGACGGTGAGCTTACCGCTGCTGTTACCTGATCTTTCCCGTTCCTACCTTCGGTAAGAGCGTAGTGAGCATAGTCGAAGTCCATGGCTGATCTGTTGGGAATGAATCTGTCAAGGTTTTCCTTGGAACTCTTCCGGGGAAGGAAGTGTTCTTGAAGTGGGCACCGAGCTTGAGCCTTCAA 1227 1446 GTAGTGAGCATAGTCGAAGT GTAGTGAGCATAGTCGAAGT |||||||||||||||||||| ==================== 20 0 0 0 FX731494|FX731494.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_17084. - 1385 1404 GGTTCATCGTCTCAGCGAGTTGCTTCCTGTAGGCCTCTCTGGAGGGTGAGCTTACCGCTGCTGCTACCTGATCTTTCCCGTTCCTACCTTCGGTAAGAGCGTAGTGAGCATAGTCGAAGTCCATTGCTGATCTGTTGGGTATGAATCTGTCAAGGTTTTCCTTGGAACTCTTCCTGGGAAGAAAGTGTTCTTGAAGTGGGCACCGAGCTTGAGCCTTCAA 1285 1504 GTAGTGAGCATAGTCGAAGT GTAGTGAGCATAGTCGAAGT |||||||||||||||||||| ==================== 20 0 0 0 CU695303|CU695303.1 Brassica rapa subsp. pekinensis clone KBrH055H09, complete sequence. - 126224 126243 GGTTCATCGTCTCAGCGAGTTGCTTCCTGTAGGCCTCTCTGGACGGTGAGCTTACCGCTGCTGTTACCTGATCTTTCCCGTTCCTACCTTCGGTAAGAGCGTAGTGAGCATAGTCGAAGTCCATGGCTGATCTGTTGGGAATGAATCTGTCAAGCTGATAGAATAAAAAAAAGCAAATCAATACACAGTTGCAAGAAAGAATCAAATACACATGATCAGT 126124 126343 GTAGTGAGCATAGTCGAAGT GTAGTGAGCATAGTCGAAGT |||||||||||||||||||| ==================== 20 0 0 0 CP123888|CP123888.1 Brassica napus cultivar Xiang5A chromosome 13. - 54265771 54265790 GGTTCATCGTCTCAGCGAGTTGCTTCCTGTAGGCCTCTCTGGATGGTGAGCTTACCGCTGCTGCTGCCTGATCTTTCCCGTTCCTTCCTTCGGTAAGGGCGTAGTGAGCATAGTCGAAGTCCATGGCTGATCTGTTGGGTATGAATCTGTCAAGCTGATAGAATTAAAAAAAAAAAGCAAATCAATACACATGATCAGTTTCTTATTACAAAACCCACAT 54265671 54265890 GTAGTGAGCATAGTCGAAGT GTAGTGAGCATAGTCGAAGT |||||||||||||||||||| ==================== 20 0 0 0