# [ GGGenome | 2025-04-04 18:20:34 ] # database: DDBJ release 134.0 (Mar, 2024) # query: AGAGCAGGTTACCAGTCACG # count: 18 # query: CGTGACTGGTAACCTGCTCT # count: 9 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins DK493760|DK493760.1 Brassica oleracea var. viridis mRNA, clone: KALE-099O11, 5' end sequence. + 790 809 CCAAAAAACCCACGGCCTGTACTGGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATAT 690 825 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 ES906193|ES906193.1 BNARO5GH_T3_011_A08_30NOV2006_064 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence. + 771 790 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATT 671 836 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 ES906572|ES906572.1 BNARO5GH_T3_015_C02_30NOV2006_012 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence. + 438 457 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 338 557 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 ES910478|ES910478.1 BNARO6GH_T3_019_D12_07DEC2006_090 Brassica napus BNARO6GH Brassica napus cDNA 5', mRNA sequence. + 749 768 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 649 868 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 EV115913|EV115913.1 0121225 Brassica napus Root library Brassica napus cDNA, mRNA sequence. + 836 855 TCCCAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGACCNGGGCGANNACCGACANCAGAAGATCCCTGAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGG 736 896 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 EV196898|EV196898.1 0098051 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence. + 169 188 CCAAAAAACCCACGGCCTGTACTGGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 69 288 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 EV204303|EV204303.1 0171710 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence. + 577 596 CCAAAAAACCCACGGCCTGTACTGGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 477 696 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 EX059838|EX059838.1 BR044482 salt-treated whole plant cDNA library KBLS Brassica rapa subsp. pekinensis cDNA clone KBLS-064D03 5', mRNA sequence. + 211 230 CCAAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCAAGCCTAGACATATATGTCCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 111 330 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 FX692708|FX692708.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_4880. + 806 825 CCAAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCAAGCCTAGACATATATGTCCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 706 925 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 FX727752|FX727752.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_20218. + 784 803 CCAAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCAAGCCTAGACATATATGTCCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 684 903 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 DX062840|DX062840.1 KBrB069N06R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB069N06, genomic survey sequence. + 649 668 CCAAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCAAGCCTAGACATATATGTCCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 549 768 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 AY162142|AY162142.1 Brassica napus lipoxygenase 1 mRNA, complete cds. + 728 747 CCAAAAAACCCACGGCCTGTACTGGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 628 847 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 CP123877|CP123877.1 Brassica napus cultivar Xiang5A chromosome 2. + 31580064 31580083 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 31579964 31580183 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 HG994355|HG994355.1 Brassica napus genome assembly, chromosome: A01. + 18303852 18303871 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 18303752 18303971 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 HG994365|HG994365.1 Brassica napus genome assembly, chromosome: C01. + 29772860 29772879 CCAAAAAACCCACGGCCTGTACTGGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 29772760 29772979 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 LR031571|LR031571.1 Brassica rapa genome, scaffold: A01. + 23549116 23549135 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 23549016 23549235 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 LR031878|LR031878.1 Brassica oleracea HDEM genome, scaffold: C1. + 29406915 29406934 CCAAAAAACCCACGGCCTGTACTGGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 29406815 29407034 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 LS974617|LS974617.2 Brassica rapa genome assembly, chromosome: A01. + 24076804 24076823 CCCAAAAACCCACGGCCTGTACTTGGAGGGTCACAGGAGTATCCTTACCCGAGAAGAGGGAGAACCGGGCGAAAACCGACAACAGAAGATCCTGAAACAGAGAGCAGGTTACCAGTCACGTCGAGCCTAGACATATATGTTCCAAGAGATGAGAGATTCGGACATTTGAAGATGTCTGATTTCCTTGCTTATGCTCTGAAAGCGATCGCTCAGATCATAC 24076704 24076923 AGAGCAGGTTACCAGTCACG AGAGCAGGTTACCAGTCACG |||||||||||||||||||| ==================== 20 0 0 0 FX658064|FX658064.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_3289. - 2012 2031 GTATGATCTGAGCAATTGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAGTGTCCGAATCTCTCATCTCTTGGAACATATATATCTAGGCTTGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTTTAGTCGGTTTTCGCCCGGTTCTTCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCAAGTACAGGCCGTGGGTTTTTTGG 1912 2131 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 FX728748|FX728748.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_35794. - 1092 1111 GTATGATCTGAGCAATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAGTGTCCGAATCTCTCATCTCTTGGAACATATATATCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTTGAGTCGGTTTTCGCCCGGTTCTTCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCAAGTACAGGCCGTGGGTTTTTTGG 992 1211 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 JT810398|JT810398.1 TSA: Raphanus sativus RS25851 mRNA sequence. - 1987 2006 GTATGATCTGAGCAATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAGTGTCCGAATCTCTCATCTCTTGGAACATATATATCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTTTAGTCGGTTTTCGCCCGGTTCTTCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCAAGTACAGGCCGTGGGTTTTTTGG 1887 2106 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 DX901611|DX901611.1 KBrH034H02F KBrH, Brassica rapa HindIII BAC library Brassica rapa subsp. pekinensis genomic clone KBrH034H02, genomic survey sequence. - 561 580 GTATGATCTGAGCGATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAATGTCCGAATCTCTCATCTCTTGGGACATATATGTCTAGGCTTGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTGTTGTCGGTTTTCGCCCGGTTCTCCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCAAGTACAGGCCGTGGGTTTTTTGG 461 680 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 FI700666|FI700666.1 BOT01-37D8TF BOT01 Brassica oleracea genomic clone BOT01-37D8, genomic survey sequence. - 535 554 GTATGATCTGAGCGATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAATGTCCGAATCTCTCATCTCTTGGAACATATATGTCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTGTTGTCGGTTTTCGCCCGGTTCTCCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCCAGTACAGGCCGTGGGTTTTTTGG 435 654 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 FI738467|FI738467.1 BOT01-85M23TR BOT01 Brassica oleracea genomic clone BOT01-85M23, genomic survey sequence. - 501 520 GTATGATCTGAGCGATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAATGTCCGAATCTCTCATCTCTTGGAACATATATGTCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTGTTGTCGGTTTTCGCCCGGTTCTCCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCCAGTACAGGCCGTGGGTTTTTTGG 401 620 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 CP123888|CP123888.1 Brassica napus cultivar Xiang5A chromosome 13. - 20764799 20764818 GTATGATCTGAGCGATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAATGTCCGAATCTCTCATCTCTTGGAACATATATGTCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTGTTGTCGGTTTTCGCCCGGTTCTCCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCCAGTACAGGCCGTGGGTTTTTTGG 20764699 20764918 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 LR778310|LR778310.1 Raphanus sativus genome assembly, chromosome: 1. - 9700135 9700154 GTATGATCTGAGCAATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAGTGTCCGAATCTCTCATCTCTTGGAACATATATATCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTTTAGTCGGTTTTCGCCCGGTTCTTCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCAAGTACAGGCCGTGGGTTTTTTGG 9700035 9700254 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0 OY743212|OY743212.1 Raphanus sativus genome assembly, chromosome: 6. - 9700135 9700154 GTATGATCTGAGCAATCGCTTTCAGAGCATAAGCAAGGAAATCAGACATCTTCAAGTGTCCGAATCTCTCATCTCTTGGAACATATATATCTAGGCTCGACGTGACTGGTAACCTGCTCTCTGTTTCAGGATCTTCTTTAGTCGGTTTTCGCCCGGTTCTTCCTCTTCTCGGGTAAGGATACTCCTGTGACCCTCCAAGTACAGGCCGTGGGTTTTTTGG 9700035 9700254 CGTGACTGGTAACCTGCTCT CGTGACTGGTAACCTGCTCT |||||||||||||||||||| ==================== 20 0 0 0