# [ GGGenome | 2025-04-08 02:02:42 ] # database: DDBJ release 134.0 (Mar, 2024) # query: AGCGAGAGGAAAGTGTCGAG # count: 20 # query: CTCGACACTTTCCTCTCGCT # count: 12 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CN726917|CN726917.1 4ETGS72H_UP_001_G06_16MAY2003_018 Brassica napus 4ETGS72h Brassica napus cDNA 5', mRNA sequence. + 62 81 CATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCGGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 1 181 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 DK544522|DK544522.1 Brassica oleracea var. viridis mRNA, clone: KALE-076N13, 3' end sequence. + 83 102 AAAGAGTAGTAACAGAAACGGCATTGATGTGATTCTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGTAGCAACACTGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACCAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCA 1 202 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 DK571400|DK571400.1 Brassica oleracea var. viridis mRNA, clone: KALE-147D05, 3' end sequence. + 157 176 ATCTTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTCTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGTAGCAACACTGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACCAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCA 57 276 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EH419339|EH419339.1 OL3871R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL3871, mRNA sequence. + 76 95 GGGAGTGGTAACAGAAACGGCATTGATGTGATTGTTGAGGAAGATGGAAGCCCCAACGTTGCGGCAGCACCGCCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCTGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCA 1 195 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EV026484|EV026484.1 BNSCS2CT_UP_145_E09_23APR2007_071 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence. + 252 271 ATCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCGGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 152 371 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EV031260|EV031260.1 BNSCS2CT_UP_212_B01_28APR2007_013 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence. + 630 649 ATCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAG 530 649 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EV142721|EV142721.1 0208653 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence. + 422 441 ATCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCGGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 322 541 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EX046335|EX046335.1 BR030979 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-003G04 5', mRNA sequence. + 181 200 GTCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGCGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 81 300 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EX126696|EX126696.1 BR110526 etiolated mature leaf cDNA library KHLW Brassica rapa subsp. pekinensis cDNA clone KHLW-16D08 5', mRNA sequence. + 421 440 GTCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGCGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 321 540 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EX889232|EX889232.1 RS1CE40TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. + 53 72 GATTGATGTGATTGTTGAGGAAGATGGAAGCCCCAACGTCGTGGTTCCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCCGTTGGGTGTGGGAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTGCTCTGAGAAGGGTTGAGTCA 1 172 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY950247|EY950247.1 RS3EA05TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. + 28 47 GGGAAGCCCCAACGTTGTGGTCCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCCGTTGGGTGTGGGAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTGCTCTGAGAAGGGTGAGTCAC 1 147 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 GR447075|GR447075.1 BNAOV1GH_T3_062_F01_14SEPT2007_005 BNAOV1GH Brassica napus cDNA 5', mRNA sequence. + 68 87 TAACAGAAACGGCATTGATGTGATTGTTGAGGAAGATGGAAGCCCCAACGTTGCGGCAGCACCGCCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCTGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCA 1 187 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 FX660123|FX660123.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_1135. + 991 1010 GAGAGTGAACGGAGGTGGGAGTAGTAGTAGTAGTAATAACAGAAACGGCATCGATGTGATTGTTGAGGAAGATGGAAGCCCCAACGTTGTGGTTCCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCCGTTGGGTGTGGGAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTGCTTTGAGAAGGGTTGAGTCA 891 1110 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 JT812850|JT812850.1 TSA: Raphanus sativus RS28303 mRNA sequence. + 468 487 GAGAGTGAACGGAGGTGGGAGTAGTAGTAGTAGTAATAACAGAAACGGCATCGATGTGATTGTTGAGGAAGATGGAAGCCCCAACGTTGTGGTTCCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCCGTTGGGTGTGGGAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTGCTTTGAGAAGGGTTGAGTCA 368 587 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 CP123885|CP123885.1 Brassica napus cultivar Xiang5A chromosome 10. + 54543408 54543427 ATCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGCGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 54543308 54543527 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 CP123894|CP123894.1 Brassica napus cultivar Xiang5A chromosome 19. + 14103281 14103300 ATCTTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTCTGGAGGAAGACGGGAGCCCCAACGTTGTGGCTACAGTAGCAACACTGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACCAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCA 14103181 14103400 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 HG994360|HG994360.1 Brassica napus genome assembly, chromosome: A06. + 39555591 39555610 GGTCGGATCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGCGGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 39555491 39555710 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 LR031569|LR031569.1 Brassica rapa genome, scaffold: A06. + 49610069 49610088 GTCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGCGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 49609969 49610188 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 LS974622|LS974622.2 Brassica rapa genome assembly, chromosome: A06. + 53227323 53227342 GTCCTCCTCTTCGATGTCAAAGAGTAGTAACAGAAACGGCATTGATGTGATTGTGGAGGAAGACGGGAGCCCCAACGTTGCGGCTACAGCAGCACCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCTGTCGGGTGTGGAAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTACTTTGAGGAGAGTTGAGTCG 53227223 53227442 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. + 11088704 11088723 GAGAGTGAACGGAGGTGGGAGTAGTAGTAGTAGTAATAACAGAAACGGCATCGATGTGATTGTTGAGGAAGATGGAAGCCCCAACGTTGTGGTTCCACCGAGCGAGAGGAAAGTGTCGAGATCCAGATCCGTTGGGTGTGGGAGCAGAAGCTTCTCCGGAGACTTCTTCGAGAGGATCACTAACGGGTTTGGAGACTGTGCTTTGAGAAGGGTTGAGTCA 11088604 11088823 AGCGAGAGGAAAGTGTCGAG AGCGAGAGGAAAGTGTCGAG |||||||||||||||||||| ==================== 20 0 0 0 EH419335|EH419335.1 OL3871F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL3871, mRNA sequence. - 692 711 TGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCAGAGAAGCTTCTGCTTCCACACCCGACAGATCTGGATCTCGACACTTTCCTCTCGCTCGG 592 714 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 EV142509|EV142509.1 0208441 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence. - 575 594 CGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTTCCACACCCGACCGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGTGCTGCTGTAGCCACAACGTTGGGGCTCCCGTCTTCCTCCACAATCACATCAATGCCGTTTCTGTTACTACTCTTTGACATCGAAGAGGAGGAT 475 694 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 EV157307|EV157307.1 0081169 Brassica napus Bud library Brassica napus cDNA, mRNA sequence. - 80 99 TCGGACGAGTCAACCCGTTAGTGATCCTCTCGAAAAGTCTCCGGAGAAGCTTCTGCTTCCACACCCGACCGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGTGCTGCTGTAGCCACAACGTTGGGGCTCCCGTCTTCCTCCACAATCACATCAATGCCGTTTCTGTTACTACTCTTTGACATCGAAGAGGAGGAT 1 199 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 EY943902|EY943902.1 RS3DM81JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence. - 632 651 TGACTCAACCCTTCTCAGAGCACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTCCCACACCCAACGGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGAACCACAACGTTGGGGCTTCCATCTTCCTCAACAATCACATCGATGCCGTTTCTGTTATTACTACTACTACTCCCACCTCCGTTCACTCTCCTT 532 751 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 FX700022|FX700022.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_13196. - 656 675 CGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTTCCACACCCGACAGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGTGCTGCTGTAGCCGCAACGTTGGGGCTCCCGTCTTCCTCCACAATCACATCAATGCCGTTTCTGTTACTACTCTTTGACATCGAAGAGGAGGAC 556 775 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 FX735581|FX735581.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_45061. - 533 552 CGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTTCCACACCCGACAGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGTGCTGCTGTAGCCACAACGTTGGGGCTCCCGTCTTCCTCCACAATCACATCAATGCCGTTTCTGTTACTACTCTTTGACATCGAAGAGGAGGAT 433 652 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 FX791788|FX791788.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_20238. - 660 679 TGACTCAACCCTTCTCAGAGCACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTCCCACACCCAACGGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGAACCACAACGTTGGGGCTTCCATCTTCCTCAACAATCACATCGATGCCGTTTCTGTTATTACTACTACTACTCCCACCTCCGTTCACTCTCTTT 560 779 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 JR007857|JR007857.1 TSA: Pachycladon fastigiatum 25550_844_6989_7_41.Pafaleaf mRNA sequence. - 319 338 TGACTCCACTCTTCTCAGAGTACAATCTCCAAACCCATTTGTGATCCTCTCAAAGAAATCTCCAGAAAAGCTTCTGCTTCCACACCCAACAGATCTAGATCTCGACACTTTCCTCTCGCTTGGTGTGACTTCAATGTTAGGACTTCCATCTTCTTCTACTATCACATCAATGCCATTTCTGTTACTACTACTACTCCCACCACCTCCATTCACTACTCTC 219 438 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 AC234720|AC234720.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A02 clone KBrB061A20, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces. - 61246 61265 CGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTTCCACACCCGACAGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGTGCTGCTGTAGCCGCAACGTTGGGGCTCCCGTCTTCCTCCACAATCACATCAATGCCGTTTCTGTTACTACTCTTTGACATCGAAGAGGAGGAC 61146 61365 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 HG994371|HG994371.1 Brassica napus genome assembly, chromosome: C07. - 41814214 41814233 CGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCAGAGAAGCTTCTGCTTCCACACCCGACAGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGTGCTGCTGCAACGTTGGGGCTTCCATCTTCCTCAACAATCACATCAATGCCGTTTCTGTTACCACTCCCACCTCCATTCGCTCTCTTTGACATC 41814114 41814333 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 LR031876|LR031876.1 Brassica oleracea HDEM genome, scaffold: C7. - 44740050 44740069 TGACTCAACTCTCCTCAAAGTACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCAGAGAAGCTTCTGCTTCCACACCCGACAGATCTGGATCTCGACACTTTCCTCTCGCTCGGCGGTGCTGCCGCAACGTTGGGGCTTCCATCTTCCTCAACAATCACATCAATGCCGTTTCTGTTACCACTCCCACCTCCATTCGCTCTCTTTGACATC 44739950 44740169 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. - 42561797 42561816 TGACTCAACCCTTCTCAAAGCACAGTCTCCAAACCCGTTAGTGATCCTCTCGAAGAAGTCTCCGGAGAAGCTTCTGCTCCCACACCCAACGGATCTGGATCTCGACACTTTCCTCTCGCTCGGTGGAACCACAACGTTGGGGCTTCCATCTTCCTCAACAATCACATCGATGCCGTTTCTGTTATTACTACTACTACTACTCCCACCTCCGTTCACTCTC 42561697 42561916 CTCGACACTTTCCTCTCGCT CTCGACACTTTCCTCTCGCT |||||||||||||||||||| ==================== 20 0 0 0