# [ GGGenome | 2025-04-05 08:11:29 ] # database: DDBJ release 134.0 (Mar, 2024) # query: AGTGCAACGGCTTAGGATAC # count: 9 # query: GTATCCTAAGCCGTTGCACT # count: 9 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins JZ378708|JZ378708.1 ndcxd0_0024_H01.ab1 Upland cotton seedling roots at salt stress 48h (ndcxd) Gossypium hirsutum cDNA 5', mRNA sequence. + 475 494 CTGGGTTGACTACTGAGAACAAGGAACTGAAACTACGGCTACAGGCTATGGAGCAACAAGCGCAGCTTAGGGATGCTTTGAATGAAAAATTGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCTGGTCAAGTGTCTGCTATGAATGGAAATCCTTTCAATAGAGGACTATCTCCT 375 550 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 CP032246|CP032246.1 Gossypioides kirkii chromosome KI_03. + 6458786 6458805 ATCAAATAGGCTTGGTAATAAACAAGTTGAGCTTTAAAGGTACTTATTTAGTATTTATTTTTCTGTGGTTTGCAGCTTTGAATGAAAAATTGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCCAGTCAAGTGTCTGCTATGAATGGAACTCCTTTCAATAGAGGACTATCTCCTCAATATTTAACCCACCAACCTGCTCCACATCACTTTGGCGTCCT 6458686 6458905 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 CP032555|CP032555.1 Gossypium raimondii isolate D5-4 chromosome D5_03. + 54253411 54253430 ATCGAATAGGCAAGGTAATAAATAAGTTGAGCTTTAAAGGTACTTATTTAGTATTTATTTTTCTGTGGTTTGCAGCTTTGAATGAAAAATTGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCTGGTCAAGTGTCTGCTATGAATGGAAATCCTTTCAATAGAGGACTATCTCCTCAATATTCAACCCACCAACCTGCTCCACATCACTTTGGCGTCCT 54253311 54253530 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 CP032573|CP032573.1 Gossypium turneri isolate D10-2 chromosome D10_03. + 55606786 55606805 ATCGAATAGGCAAGGTAATAAACAAGTTGAGCTTTAAAGGTACTTATGTAGTATTTATTTTTCTGTGGTTTGCAGCTTTGAATGAAAAATTGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCTGGTCAAGTGTCTGCTATGAATGGAAATCCTTTCAATAGAGGACTATCTCCTCAATATTCAACCCACCAACCTGCTCCACATCACTTTGGCGTCCT 55606686 55606905 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 CP106710|CP106710.1 Gossypium bickii isolate GPG1lz chromosome 3. + 15858760 15858779 ATCGAATAGGCAAGGTAATTAACAAGTTGAGCTTTAAAGGTACTTATTTAGTATTTATTTTTCTGTGGTTTGTAGCTTTGAATGAAAAATTGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCTGGTCAAGTGTCTGCTATGAATGGAAATCCTTTCAATAGAGGACTATCTCCTCAATATTTAACCCACCAACCTGCTCCACATCACTTTGGTGTCCT 15858660 15858879 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 GQ393482|GQ393482.1 Gossypium hirsutum cultivar Deltapine 33 B clone MONCS0447 SSR marker CGR5448 genomic sequence. + 186 205 CTGGGTTGACTACTGAGAACAAGGAACTGAAACTACGGCTACAGGCTATGGAGCAACAAGCGCAGCTTAGGGATGCTTTGAATGAAAAATTGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCTGGTCAAGTGTCTGCTATGAATGGAAATCCTTTCAATAGAGG 86 251 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 HQ527219|HQ527219.1 Gossypium herbaceum clone NBRI_B_2579 simple sequence repeat marker, mRNA sequence. + 91 110 CTGAGAACAAGGAACTGAAACTACGGCTACAGGCTATGGAGCAACAAGCGCAGCTTAGGGATGCTTTGAATGAAAAAATTAGAAGGAAGAAGTGCAACGGCTTAGGATACAAGCTGGTCAAGTGTCTGCTATGAATGGAAATCCTTTCAATAGAGGACTATCTCCTCAATATTTAACCCACCAACCTGCTCCACATCACTTTGGCGTCCT 1 210 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 OX104062|OX104062.1 Dicrocoelium dendriticum genome assembly, chromosome: 13. + 48326593 48326612 GAACATTGAATGAATTACCGAAGGACTAAAAGGTGGCTCTTGTATGGAAATCCATCTTTCACGCTCCTGTAGCGTCTACCGCTAACCAGTGTCAACGTCTAGTGCAACGGCTTAGGATACTTTGTGTAACGACTAAAACCAATGGTGTACGGCTTAACCCTGTAGAATTAAGTGCACGCTGTTGGCATGAGATGTGTGTGATAACCTGTAGCTTTCTACG 48326493 48326712 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 OY787674|OY787674.1 Spisula subtruncata genome assembly, chromosome: 15. + 8637388 8637407 AGGTGAAAAGGAAAATCTTAGAAGAAATATGTTTCAAAATCATTTAAAGGAATGAAATTATAATCCAAACCTGATCAATAAAATATGGTCTAGCAGTTCAAGTGCAACGGCTTAGGATACCTAATAATAAATACTACCTAGATGTGTTCAGTCTTAGCGTTTTATATTTTTCAGGGATCTGTGTTACATTTATATATCTCAGGGGGTTTAAACCATTAAC 8637288 8637507 AGTGCAACGGCTTAGGATAC AGTGCAACGGCTTAGGATAC |||||||||||||||||||| ==================== 20 0 0 0 CO108192|CO108192.1 GR__Eb0039N03.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0039N03 5', mRNA sequence. - 513 532 AGGACGCCAAAGTGATGTGGAGCAGGTTGGTGGGTTGAATATTGAGGAGATAGTCCTCTATTGAAAGGATTTCCATTCATAGCAGACACTTGACCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCTTCAATTTTTCATTCAAAGCATCCCTAAGCTGCGCTTGTTGCTCCATAGCCTGTAGCCGTAGTTTCAGTTCCTTGTTCTCAGTAGTCAACCCAG 413 632 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 DW488957|DW488957.1 GH_RMIRS_072_D10_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA sequence. - 175 194 AGGACGCCAAGGTGATGTGGAGCAGGTTGGTGGGTTAAATATTGAGGAGATAGTCCTCTATTGAAAGGATTTCCATTCATAGCAGACACTTGACCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCTTCAATTTTTCATTCAAAGCATCCCTAAGCTGCGCTTGTTGCTCCATAGCCTGTAGCCGTAGTTTCAGTTCCTTGTTCTCAGTAGTCAACCCAG 75 294 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 DW508404|DW508404.1 GH_TMIRS_124_A03_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence. - 507 526 AGGACGCCAAAGTGATGTGGAGCAGGTTGGTGGGTTGAATATTGAGGAGATAGTCCTCTATTGAAAGGATTTCCATTCATTGCAGACACTTGACCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCTTCAATTTTTCATTCAAAGCATCCCTAAGCTGCGCTTGTTGCTCCATAGCCTGTAGCCGTAGTTTCAGTTCCTTGTTCTCAGTAGTCAACCCAG 407 626 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 CP032573|CP032573.1 Gossypium turneri isolate D10-2 chromosome D10_03. - 55601617 55601636 AGGACGCCAAAGTGATGTGGAGCAGGTTGGTGGGTTAAATATTGAGGAGATAGTCCTCTATTGAAAGGACTTCCATTCATAGCAGACACTTGACCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCTTCAATTTTTCATTCAAAGCTGCAAACCACAGAAAAATAAATACTAAATAAGTACCTTTAAAGCTCAACTTGTTTATTACCTTGCCTATTCGAT 55601517 55601736 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 CP106685|CP106685.1 Gossypium herbaceum isolate Zhongcao1 chromosome 3. - 120600965 120600984 AGGACGCCAAAGTGATGTGGAGCAGGTTGGTGGGTTAAATATTGAGGAGATAGTCCTCTATTGAAAGGATTTCCATTCATAGCAGACACTTGACCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCTTCAATTTTTCATTCAAAGCTGCAAACCACAGAAAAATAAATACTATAATAAGTACCTTTAAAGCTCAACTTGTTTATTACCTTGCCTATACGA 120600865 120601084 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 OY288265|OY288265.1 Hibiscus tridactylites genome assembly, chromosome: 1. - 17513694 17513713 AGGACACCAAAGTGATGTGGAGCAGGTTGACGGGGTAAAAATTGAGGAGGCGCTCCTCTACCGAAAGGATTTCCATTCATAGCTGACACTTGGCCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCCTCAATGTTTCATGCAAAGCTGCAGACCGTGGAAAAGAAAATACTAAATAAGTACATTCAAAGGCTAACTTGTTTACTATCTCGCCTAATTTAT 17513594 17513813 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 OY288266|OY288266.1 Hibiscus tridactylites genome assembly, chromosome: 2. - 17040148 17040167 AGGACACCAAAGTGATGTGGAGCAGGTTGACAGGGTAAAAATTGAGGAGGCGCTCCTCTACCGAAAGGATTTCCATTCATAGCTGACACTTGGCCAGCTTGTATCCTAAGCCGTTGCACTTCTTCCCTCAATTTTTCATGCAAAGCTGCAGACCATGGAAAAGAAAATACTAAATAAGTACATTCAAAGGCTAACTTGTTTACTATCTCGCCTAATTTAT 17040048 17040267 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 OY288268|OY288268.1 Hibiscus tridactylites genome assembly, chromosome: 4. - 72837070 72837089 AGGACACCATAGGGATGTGGAGCAGGTTGATGGGGTAAAAATTGAGGAGGCACTCCTCTATTGAAAGGATATCCATTCACCGCGGACACTTGGCCGGCTTGTATCCTAAGCCGTTGCACTTCTTCCCTCAATTTTTCATGCAAAGCTACAGACAGCAGAAAAGTAAATACCAAGTAAACCATATACAGGCAAAAATATGACAAACTGTTCCATGCCATAG 72836970 72837189 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0 OY288273|OY288273.1 Hibiscus tridactylites genome assembly, chromosome: 9. - 32818861 32818880 AGGACACCATAGGGATGCGGAGCAGGTTGATGGGGTAAAAATTGAGGAGGCACTCCTCTATTGAAAGGATATCCATTCTCCGCGGACACTTGGCCGGCTTGTATCCTAAGCCGTTGCACTTCTTCCCTCAATTTTTCATGCAAAGCTACAGACAGCAGAAAAGTAAATACCAAGTAAACCATATACAGGCAAAAATATGACAAACTGTTCCATGCCATAA 32818761 32818980 GTATCCTAAGCCGTTGCACT GTATCCTAAGCCGTTGCACT |||||||||||||||||||| ==================== 20 0 0 0