# [ GGGenome | 2025-04-08 01:16:12 ] # database: DDBJ release 134.0 (Mar, 2024) # query: ATAAAGCTGACCAGATGGGAGA # count: 15 # query: TCTCCCATCTGGTCAGCTTTAT # count: 4 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins EV543634|EV543634.1 RR3A340JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence. + 88 109 AGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAGCATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCGTTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 1 209 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 EW721424|EW721424.1 RS1B237JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence. + 33 54 GATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 1 154 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 EX758582|EX758582.1 RR2BM61JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence. + 88 109 TTTTTTTTTTTTTTTTTTTTTTTGTGAAGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGAAACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTCTTCATCAGTAAAAGTCTAGGAGTGGCCTGAGTTCTTTCCTCTGAACT 1 209 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 EY944644|EY944644.1 RS3DX12JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence. + 104 125 TTTTTTTTTTTTTTGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAAAAGTACATCATAGAATAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAACTTGGTAAAA 4 225 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 FD574622|FD574622.1 RS2FH17JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence. + 103 124 TTTTTTTTTTTTTTGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAACACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAACTTGGTAAAA 3 224 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 FD576089|FD576089.1 RS2G233JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence. + 128 149 AACAAACATGATTAGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACGACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAACTTGGTAAAA 28 249 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 FD583128|FD583128.1 RS3F906JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence. + 66 87 TTTTTTTTTTTTTTTTTTCATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 1 187 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 FD584423|FD584423.1 RS3FR27JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence. + 142 163 AACAAACATGATTAGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAACTTGGTAAAA 42 263 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 FD986022|FD986022.1 RR4HA48JQB RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence. + 105 126 TTTTTTTTTTTTTCGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 5 226 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 FX658752|FX658752.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_11991. + 88 109 TGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 1 209 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 JT791777|JT791777.1 TSA: Raphanus sativus RS07230 mRNA sequence. + 87 108 GGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAACTTGGTAAAA 1 208 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 JT791778|JT791778.1 TSA: Raphanus sativus RS07231 mRNA sequence. + 87 108 GGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAACTTGGTAAAA 1 208 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 AC255283|AC255283.1 Raphanus sativus cultivar WK10039 clone RsH011K10, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces. + 120664 120685 AACAAACATGATTAGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 120564 120785 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 LR778312|LR778312.1 Raphanus sativus genome assembly, chromosome: 3. + 8655049 8655070 AACAAACATGATTAGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 8654949 8655170 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 OY743206|OY743206.1 Raphanus sativus genome assembly, chromosome: 9. + 8655049 8655070 AACAAACATGATTAGGCAGGCATAAGTTCATATATTGTGATGATAGTTCTAATAATACAAAGTCTAGTGATATATTACACAACTTCACTTCAACTTAAACATAAAGCTGACCAGATGGGAGATACAACATCAAACAGTACATCATAAAATTACATTATTAGGAGATTAGTCTTTTCTTCATTAGTAAAAGTCTAGGAGTGAACTGAGTTCTTTCCTCTGAAC 8654949 8655170 ATAAAGCTGACCAGATGGGAGA ATAAAGCTGACCAGATGGGAGA |||||||||||||||||||||| ====================== 22 0 0 0 EX754202|EX754202.1 RR2BM61TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 351 372 AGTTCAGAGGAAAGAACTCAGGCCACTCCTAGACTTTTACTGATGAAGAAAGACTAATCTCCTAATAATGTAATTTTATGATGTACTGTTTGATGTTGTTTCTCCCATCTGGTCAGCTTTATGTTTAAGTTGAAGTGAAGTTGTGTAATATATCACTAGACTTTGTATTATTAGAACTATCTTCACAAAAAAAAAAAAAAAAAAAAAAA 251 459 TCTCCCATCTGGTCAGCTTTAT TCTCCCATCTGGTCAGCTTTAT |||||||||||||||||||||| ====================== 22 0 0 0 FD572446|FD572446.1 RS2G233TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 456 477 TTTTACCAAGTTCAGAGGAAAGAACTCAGTTCACTCCTAGACTTTTACTAATGAAGAAAAGACTAATCTCCTATTTTATGATGTACTGTTTGATGTTGTATCTCCCATCTGGTCAGCTTTATGTTTAAGTTGAAGTGAAGTCGTGTAATATATCACTAGACTTTGTATTATTAGAACTATCATCACAATATATGAACTTATGCCTGCCTAATCATGTTTGTT 356 577 TCTCCCATCTGGTCAGCTTTAT TCTCCCATCTGGTCAGCTTTAT |||||||||||||||||||||| ====================== 22 0 0 0 FD580677|FD580677.1 RS3FR27TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. - 608 629 TTTTACCAAGTTCAGAGGAAAGAACTCAGTTCACTCCTAGACTTTTACTAATGAAGAAAAGACTAATCTCCTATTTTATGATGTACTGTTTGATGTTGTATCTCCCATCTGGTCAGCTTTATGTTTAAGTTGAAGTGAAGTTGTGTAATATATCACTAGACTTTGTATT 508 676 TCTCCCATCTGGTCAGCTTTAT TCTCCCATCTGGTCAGCTTTAT |||||||||||||||||||||| ====================== 22 0 0 0 FX738911|FX738911.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_17755. - 1665 1686 GTTCAGAGGAAAGAACTCAGTTCACTCCTAGACTTTTACTAATGAAGAAAAGACTAATCTCCTAATAATGTAATTTTATGATGTACTGTTTGATGTTGTATCTCCCATCTGGTCAGCTTTATGTTTAAGTTGAAGTGAAGTTGTGTAATATATCACTAGACTTTGTATTATTAGAACTATCATCACAATATATGAACTTATGCCTGCCTA 1565 1774 TCTCCCATCTGGTCAGCTTTAT TCTCCCATCTGGTCAGCTTTAT |||||||||||||||||||||| ====================== 22 0 0 0