# [ GGGenome | 2025-04-04 17:56:26 ] # database: DDBJ release 134.0 (Mar, 2024) # query: ATGCACTGTCGTAGTGTTCC # count: 6 # query: GGAACACTACGACAGTGCAT # count: 22 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins BH509598|BH509598.1 BOGXA05TF BOGX Brassica oleracea genomic clone BOGXA05, genomic survey sequence. + 402 421 TTCTTGGGGTTGACAAGACCGAGTCCATGAACAGCGAGGCTGTCCATTACTATATCTGGTTGGTTCCCTAAGACACCTGGGGACTGGACTGGGTATGCTAATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCCCAGTAGCCAGCTAAAGCGTGCCACGCATACACTTGCCTGTAGATAAAGGAGTCAAGGCTTCATAAGTATG 302 521 ATGCACTGTCGTAGTGTTCC ATGCACTGTCGTAGTGTTCC |||||||||||||||||||| ==================== 20 0 0 0 FI687121|FI687121.1 BOT01-19O3TF BOT01 Brassica oleracea genomic clone BOT01-19O3, genomic survey sequence. + 256 275 TTCTTGGGGTTGACAAGACCGAGTCCATGAACAGCGAGGCTGTCCATTACTATATCTGGTTGGTTCCCTAAAACACCTGGGGACTGGACTGGGTATGCTAATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCCCAGTAGCCAGCTAAAGCGTGCCACGCATACACTTGCCTGTAGATAAAGGAGTCAAGGCTTCATAAGTATG 156 375 ATGCACTGTCGTAGTGTTCC ATGCACTGTCGTAGTGTTCC |||||||||||||||||||| ==================== 20 0 0 0 HG994372|HG994372.1 Brassica napus genome assembly, chromosome: C08. + 30593683 30593702 TTCTTGGGGTTGACAAGACCGAGTCCATGAACAGCGAGGCTGTCCATGACTATATCTGGTTGGTTCCCTAAGACACCTGGGGACTGGACTGGGTATGCTAATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCCCAGTAGCCAGCTAAAGCGTGCCACGCATACACTTGCCTGTAGATAAAGGAGTCAAGGCTTCATAAGTATG 30593583 30593802 ATGCACTGTCGTAGTGTTCC ATGCACTGTCGTAGTGTTCC |||||||||||||||||||| ==================== 20 0 0 0 LR031879|LR031879.1 Brassica oleracea HDEM genome, scaffold: C8. + 39880416 39880435 TTCTTGGGGTTGACAAGACCGAGTCCATGAACAGCGAGGCTGTCCATTACTATATCTGGTTGGTTCCCTAAGACACCTGGGGACTGGACTGGGTATGCTAATGCACTGTCGTAGTGTTCCATACCGGAAGCTGCGGGTTTCACTCCGCCCCAGTAGCCAGCTAAAGCGTGCCACGCATACACTTGCCTGTAGATAAAGGAGTCAAGGCTTCATAAGTATG 39880316 39880535 ATGCACTGTCGTAGTGTTCC ATGCACTGTCGTAGTGTTCC |||||||||||||||||||| ==================== 20 0 0 0 OY743211|OY743211.1 Raphanus sativus genome assembly, chromosome: 5. + 30858017 30858036 TTCTTAGGGTTGACAAGACCGAGACCGTGAACAGCGAGGCTGTCCATGACTATATCTGGTTGGTTCCCTAAGACACCAGGGGACTGAACTGGGTAAGCTAATGCACTGTCGTAGTGTTCCATTCCGGAGGCAGCGGGTTTCACTCCACCCCAGTAGCCAGCTAAAGCGTGCCACGCGTAGACTTGTCTGTAAATATAAAGGAGTCAAAAGCCTTATGAGT 30857917 30858136 ATGCACTGTCGTAGTGTTCC ATGCACTGTCGTAGTGTTCC |||||||||||||||||||| ==================== 20 0 0 0 OY743218|OY743218.1 Cardamine flexuosa genome assembly, chromosome: 5. + 21891196 21891215 TTCTTAGGGTTGACAAGACCAAGACCGTGAACAGCTAAACTGTCCATTACTATATCTGGTTGGTTCCCTAAGACACCTGGAGATTGAACTGGGTATGCTAATGCACTGTCGTAGTGTTCCATTCCTGATGCAGCAGGTTTAACTCCACCCCAGTAGCCAGCTAAAGCGTGCCATGCGTAAACTTGCCTGTAACATAAAGGTGTGAGTATGAGAGTATGCA 21891096 21891315 ATGCACTGTCGTAGTGTTCC ATGCACTGTCGTAGTGTTCC |||||||||||||||||||| ==================== 20 0 0 0 EE418438|EE418438.1 58ACPE48_UP_018_A09_21SEP2004_079 Brassica napus seed library Brassica napus cDNA 5', mRNA sequence. - 3 22 ATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTAATGGACAGCCTCGCTGTTCATGGACTCGGTCTTGTCAACCCCAAGAA 1 122 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 EX024960|EX024960.1 BR009604 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-014H09 5', mRNA sequence. - 225 244 TCGTTGACAATGCTAAGCAGCGTCATAATGTGAAGCAAGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 125 344 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 EX035767|EX035767.1 BR020411 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-176E11 5', mRNA sequence. - 84 103 CAGCGTCATAATGTGAAGCTNGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 1 203 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 EX890662|EX890662.1 RS1CV68TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 164 183 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGGGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGATATCGTTATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 64 283 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FD543536|FD543536.1 RR2FM43TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 439 458 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTACGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGAGTGAAACCCGCTGCCTCCGGGATGGAACACTACGACAGTGCATTAGCACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGACATAGTCATGGACAGTCTCGCCGTTCACGGACTCGGTCTTGTCAACCCTAAGAAAG 339 558 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FD939971|FD939971.1 RS1GK12TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 93 112 GATGCAAAGCAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGAGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGATATCGTTATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 1 212 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FY446380|FY446380.1 Raphanus sativus mRNA, clone: RSCS01I05, 5' end sequence. - 100 119 CTCGTTGACATGCAAAGAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGGGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGACATAGTCATGGACAGCCTCGCCGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 1 219 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FY453004|FY453004.1 Raphanus sativus mRNA, clone: RSCS20F15, 5' end sequence. - 288 307 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGGGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGACATAGTCATGGACAGCCTCGCCGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 188 407 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 JZ469520|JZ469520.1 CCPd_EST_345 Piriformospora indica colonized with Chinese cabbage roots library Brassica rapa subsp. chinensis cDNA, mRNA sequence. - 327 346 TCGTTGACAATGCTAAGCAGCGTCATAATGTGAAGCAAGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 227 446 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 JZ470064|JZ470064.1 CCPd_EST_972 Piriformospora indica colonized with Chinese cabbage roots library Brassica rapa subsp. chinensis cDNA, mRNA sequence. - 297 316 TCGTTGACAATGCTAAGCAGCGTCATAATGTGAAGCAAGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 197 416 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FX657535|FX657535.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_11960. - 1097 1116 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTACGCGTGGCACGCTTTAGCTGGCTACTGGGGTGGAGTGAAACCCGCTGCCTCCGGAATGGAACACTACGACAGTGCATTAGCTTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 997 1216 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FX693794|FX693794.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_732. - 1050 1069 TCGTTGACAATGCTAAGCAGCGTCATAATGTGAAGCAAGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 950 1169 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FX726845|FX726845.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_2196. - 1028 1047 TCGTTGACAATGCTAAGCAGCGTCATAATGTGAAGCAAGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 928 1147 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 FX727747|FX727747.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_128. - 1094 1113 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTACGCGTGGCACGCTTTAGCTGGCTACTGGGGTGGAGTGAAACCCGCTGCCTCCGGAATGGAACACTACGACAGTGCATTAGCTTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 994 1213 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 JT793803|JT793803.1 TSA: Raphanus sativus RS09256 mRNA sequence. - 2213 2232 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGGGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGACATAGTCATGGACAGCCTCGCCGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 2113 2332 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 JT793804|JT793804.1 TSA: Raphanus sativus RS09257 mRNA sequence. - 1069 1088 TCGTTGACAATGCAAAGCAGCACCACAATGTGAAACAAGTCTATGCGTGGCATGCTTTAGCTGGCTACTGGGGTGGGGTGAAACCCGCTGCTTCCGGAATGGAACACTACGACAGTGCATTAGCGTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGACATAGTCATGGACAGCCTCGCCGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 969 1188 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 BH947182|BH947182.1 obv12d02.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence. - 150 169 CATACTTATGAAGCCTTGACTCCTTTATCTACAGGCAAGTGTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCAGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTAATGGACAGCCTCGCTGTTCATGGACTCGGTCTTGTCAACCCCAAGAA 50 269 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 AC189457|AC189457.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB073E19, complete sequence. - 59570 59589 CTTATATAAGGCTTTTGACTCCTTAATTAAACAGGCAAGTTTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCTGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCCAAGAA 59470 59689 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 CP123890|CP123890.1 Brassica napus cultivar Xiang5A chromosome 15. - 11128276 11128295 CATACTTATGAAGCCTTGACTCCTTTATCTACAGGCAAGTGTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCGCAGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTAATGGACAGCCTCGCTGTTCATGGACTCGGTCTTGTCAACCCCAAGAA 11128176 11128395 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 LR778313|LR778313.1 Raphanus sativus genome assembly, chromosome: 4. - 13174933 13174952 ACTCATAAGGCTTTTGACTCCTTTATATTTACAGACAAGTCTACGCGTGGCACGCTTTAGCTGGCTACTGGGGTGGAGTGAAACCCGCTGCCTCCGGAATGGAACACTACGACAGTGCATTAGCTTACCCAGTTCAGTCCCCTGGTGTCTTAGGGAACCAACCAGATATAGTCATGGACAGCCTCGCTGTTCACGGTCTCGGTCTTGTCAACCCTAAGAA 13174833 13175052 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 X79330|X79330.1 B.oleracea putative imbibition protein mRNA. - 1134 1153 TAGTTGACAATGCAAAGCAGCGCCATAATGTGAAGCAAGTGTATGCGTGGCACGCTTTAGCTGGCTACTGGGGCGGAGTGAAACCCCGAGCTTCCGGTATGGAACACTACGACAGTGCATTAGCATACCCAGTCCAGTCCCCAGGTGTCTTAGGGAACCAACCAGATATAGTAATGGACAGCCTCGCTGTTCATGGACTCGGTCTTGTCAACCCCAAGAA 1034 1253 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0 OX297864|OX297864.1 Eupithecia vulgata genome assembly, chromosome: 5. - 13265934 13265953 CAATGTAAATCAAAAGCTACGACGAGACGGTGGCGCCGCCGCGCTCATACAAACACTAGGTACATTCCACGGTGCGGCGTAGCCAAGGCTACGAAGGTACGGAACACTACGACAGTGCATTTATAATATAAATAAATAATATAAATAATAATGCTGGACAATCCATTGATTTGTTTGTAAAGCTGAACGCGCTCCCGGCACGCGCCGTTTCTTAGTACGC 13265834 13266053 GGAACACTACGACAGTGCAT GGAACACTACGACAGTGCAT |||||||||||||||||||| ==================== 20 0 0 0