# [ GGGenome | 2025-04-06 07:09:51 ] # database: DDBJ release 134.0 (Mar, 2024) # query: ATTGCTGAGATTGGCTCAGG # count: 8 # query: CCTGAGCCAATCTCAGCAAT # count: 15 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins OY282536|OY282536.1 Solea solea genome assembly, chromosome: 3. + 3558606 3558625 TTTATATTTTAACCCTTCTGTAACCAATCCTGTCGTCGCAGACAGGATTTGGCATACATACTTTTCATTACAGTAACTCCCAGACTGTGATATCTCGAAAATTGCTGAGATTGGCTCAGGCAATATAATATCTCAAACAATATTATATGTATTATATGTATTATTATTATTATTATTATTATTATTATTATTAACAATGATAATAATATATAATAATATA 3558506 3558725 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 FX694242|FX694242.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_297. + 2187 2206 CGACGACGATGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCCGCGAGTATTGGTACTCGGGAAAGAGTG 2087 2235 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 FX727689|FX727689.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_582. + 2070 2089 CGACGACGATGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCCGCGAGTATTGGTACTCGGGAAAGTGTGCGTTTAAGAGTGAGTGTGAGAGAGAGAGAAAGGTGAAGATCGCAAGTGTAGGATTGCCACATGTACTTGCT 1970 2189 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 HG994364|HG994364.1 Brassica napus genome assembly, chromosome: A10. + 8311757 8311776 CGACGACGATGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCCGCGAGTATTGGTACTCGGGAAAGTGTGCGTTTAAGAGTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 8311657 8311876 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 HG994373|HG994373.1 Brassica napus genome assembly, chromosome: C09. + 39740664 39740683 GTGCGACGACGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCGGCGAGTATCGATACTCGGGGAAAGTGTGCGTTAAAGAGTGAGAGAGAGAGACAGGGAGGGGAGATCTAAGAGAGGTGAAGATCGCAAGTGTAGGATTG 39740564 39740783 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 LR031577|LR031577.1 Brassica rapa genome, scaffold: A10. + 5278627 5278646 CGACGACGATGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCCGCGAGTATTGGTACTCGGGAAAGTGTGCGTTTAAGAGTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 5278527 5278746 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 LR031875|LR031875.1 Brassica oleracea HDEM genome, scaffold: C9. + 38903403 38903422 GTGCGACGACGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCGGCGAGTATCGATACTCGGGGAAAGTGTGCGTTAAAGAGTGAGAGAGAGAGACAGGGAGGGGAGATCTAAGAGAGGTGAAGATCGCAAGTGTAGGATTG 38903303 38903522 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 LS974626|LS974626.2 Brassica rapa genome assembly, chromosome: A10. + 8027072 8027091 CGACGACGATGATGAAGAAGAAGGCCACAGCGGCGAGTACTTAGCGCCGGCGAATCTAGAAAGGAGAAAAACGGTGTCGAATCTCGCATAGGTCGACGACATTGCTGAGATTGGCTCAGGCCGCGAGTATTGGTACTCGGGAAAGTGTGCGTTTAAGAGTGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 8026972 8027191 ATTGCTGAGATTGGCTCAGG ATTGCTGAGATTGGCTCAGG |||||||||||||||||||| ==================== 20 0 0 0 OW121832|OW121832.1 Telmatherina bonti genome assembly, chromosome: 12. - 32956794 32956813 ACCTTAGTGTAGGAAATGAGACTATGAACACAAATCTATGGGAACTTCATTCTATCAATCCAATCTGGATGGATGGATGGATGGATGAGTCACATTAAAGCCTGAGCCAATCTCAGCAATTAGCAGGCAAGAGGTAGGGTACACTCCGGACAGGTCCCCAGTCTATCACAGTACATTGGAACCGATTTGTAAATAAAAACAAATCGGTTCCAATTTGTTT 32956694 32956913 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 DK481965|DK481965.1 Brassica oleracea var. viridis mRNA, clone: KALE-069B17, 5' end sequence. - 36 55 GGACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 155 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 DK485464|DK485464.1 Brassica oleracea var. viridis mRNA, clone: KALE-078D24, 5' end sequence. - 89 108 GGCGATCTTCACCTCTCTTAGATCTCCCCTCCCTGTCTCTCTCTCTCACTCTTTAACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 208 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 DK501849|DK501849.1 Brassica oleracea var. viridis mRNA, clone: KALE-121B05, 5' end sequence. - 36 55 GGACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 155 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 DY030496|DY030496.1 23FGYLD_UP_002_C11_01FEB2004_091 Brassica napus 23FGYLD Brassica napus cDNA 5', mRNA sequence. - 96 115 CTACACTTGCGATCTTCACCTCTCTTAGATCTCCCCTCCCTGTCTCTCTCTCTCACTCTTTAACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 215 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 EE424078|EE424078.1 31ETGS12_UP_007_G02_11MAR2004_004 Brassica napus 31ETGS12 Brassica napus cDNA 5', mRNA sequence. - 71 90 GAGATCTCCCCTCCCTGTCTCTCTCTCTCACTCTTTAACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 190 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 EE450747|EE450747.1 76ETGS72_UP_017_C11_21MAY2005_091 76ETGS72 Brassica napus cDNA 5', mRNA sequence. - 94 113 ACACTTGCGATCTTCACCTCTCTTAGATCTCCCCTCCCTGTCTCTCTCTCTCACTCTTTAACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 213 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 EE522961|EE522961.1 37RDBRH_UP_010_D10_29MAR2004_074 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence. - 6 25 GGCGGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCATCGTCGTCG 1 125 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 ES945060|ES945060.1 48RDOAM_UP_076_F05_04FEB2006_037 Brassica oleracea 48RDOAM Brassica oleracea cDNA 5', mRNA sequence. - 87 106 CGATCTTCACCTCTCTTAGATCTCCCCTCCCTGTCTCTCTCTCTCACTCTTTAACGCACAGTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 206 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 EV202999|EV202999.1 0104152 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence. - 90 109 GTGGACGCTGCAGGACCGGTCCGGAATTTCGGGTCGAGAACGCGTCCGCTCCTCTTAACGCACACTTTCCCGAGTACCAATACTCGCGGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCATCGTCGTCG 1 209 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 DX013252|DX013252.1 KBrB004G10F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB004G10, genomic survey sequence. - 166 185 AGCAAGTACATGTGGCAATCCTACACTTGCGATCTTCACCTTTCTCTCTCTCTCACACTCACTCTTAAACGCACACTTTCCCGAGTACCAATACTCGCGGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCATCGTCGTCG 66 285 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 AJ250771|AJ250771.1 Brassica napus partial mRNA for plastidial phosphoglucomutase. - 7 26 TCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 1 126 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 CP123880|CP123880.1 Brassica napus cultivar Xiang5A chromosome 5. - 12449895 12449914 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTCTTAAACGCACACTTTCCCGAGTACCAATACTCGCGGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCATCGTCGTCG 12449795 12450014 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 CP123891|CP123891.1 Brassica napus cultivar Xiang5A chromosome 16. - 25463084 25463103 CAATCCTACACTTGCGATCTTCACCTCTCTTAGATCTCCCCTCCCTGTCTCTCTCTCTCACTCTTTAACGCACACTTTCCCCGAGTATCGATACTCGCCGCCTGAGCCAATCTCAGCAATGTCGTCGACCTATGCGAGATTCGACACCGTTTTTCTCCTTTCTAGATTCGCCGGCGCTAAGTACTCGCCGCTGTGGCCTTCTTCTTCATCGTCGTCGCAC 25462984 25463203 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0 DQ407199|DQ407199.1 Brassica rapa subsp. chinensis clone D2 microsatellite sequence. - 82 101 CCTACACTTGCGATCTTCACCTTTCTCTCTCTCTCACACTCACTCTTAAACGCACACTTTCCCGAGTACCAATACTCGCGGCCTGAGCCAATCTCAGCAAT 1 101 CCTGAGCCAATCTCAGCAAT CCTGAGCCAATCTCAGCAAT |||||||||||||||||||| ==================== 20 0 0 0