# [ GGGenome | 2025-04-05 08:44:40 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CAACAAGGGGTTTGGCTTTA # count: 4 # query: TAAAGCCAAACCCCTTGTTG # count: 17 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CX296444|CX296444.1 C05141A11SK FerrChloL1 Citrus clementina cDNA clone C05141A11, mRNA sequence. + 81 100 ACGAGGTTTTTTTTGAAACCAAAAGATAGATTTTACTAAAACAAATTTAAGGAAAAAGGCCAAACTCTTTACATTTCTACCAACAAGGGGTTTGGCTTTAGACTTCGGACTGTTAGAGGGACAATCCGGACTCTTCATCTTCATCAAGACTGGAAGCGTAAGGAATGTAGAGGGCCCAGATGAGACCAAAAACACCCAAC 1 200 CAACAAGGGGTTTGGCTTTA CAACAAGGGGTTTGGCTTTA |||||||||||||||||||| ==================== 20 0 0 0 DC890929|DC890929.1 Citrus unshiu mRNA, clone: GSA1108, 5'-end sequence, expressed in seedling. + 101 120 ATTGCACAGAGAGGAAACATGAGTCAAGAAACAGAAACACAAAAGATAGATTTTACTAAAACAAATTTAAGGAAAAAGGCCAAACTCTTTACATTTCTACCAACAAGGGGTTTGGCTTTAGACTTCGGACTGTTAGAGGGACAATCCGGACTCTTCATCTTCATCAAGACTGGAAGCGTAAGGAATGTAGAGGGCCCAGATGAGACCAAAAACACCCAAC 1 220 CAACAAGGGGTTTGGCTTTA CAACAAGGGGTTTGGCTTTA |||||||||||||||||||| ==================== 20 0 0 0 EB685504|EB685504.1 CP-2_G06_040.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-2_G06_040 3', mRNA sequence. + 128 147 ATTGCACAGAGAGGAAACATGAGTCAAGAAACAGAAACACAAAAGATAGATTTTACTAAAACAAATTTAAGGAAAAAGGCCAAACTCTTTACATTTCTACCAACAAGGGGTTTGGCTTTAGACTTCGGACTGTTAGAGGGACAATCCGGACTCTTCATCTTCATCAAGACTGGAAGCGTAAGGAATGTAGAGGGCCCAGATGAGACCAAAAACACCCA 28 245 CAACAAGGGGTTTGGCTTTA CAACAAGGGGTTTGGCTTTA |||||||||||||||||||| ==================== 20 0 0 0 OY754318|OY754318.1 Citrus sinensis genome assembly, chromosome: 1. + 25206062 25206081 ATTGCACAGAGAGGAAACATGAGTCAAGAAACAGAAACACAAAAGATAGATTTTACTAAAACAAATTTAAGGAAAAAGGCCAAACTCTTTACATTTCTACCAACAAGGGGTTTGGCTTTAGACTTCGGACTGTTAGAGGGACAATCCGGACTCTTCATCTTCATCAAGACTGGAAGCGTAAGGAATGTAGAGGGCCCAGATGAGACCAAAAACACCCAAC 25205962 25206181 CAACAAGGGGTTTGGCTTTA CAACAAGGGGTTTGGCTTTA |||||||||||||||||||| ==================== 20 0 0 0 BQ623144|BQ623144.1 USDA-FP_00235 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00235 5', mRNA sequence. - 486 505 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTTGTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAC 386 599 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 BQ623792|BQ623792.1 USDA-FP_00883 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00883 5', mRNA sequence. - 455 474 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTTGTGTTTCAAAAAAAAAAAAAAAAAAC 355 561 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 BQ624374|BQ624374.1 USDA-FP_01465 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01465 5', mRNA sequence. - 220 239 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 120 339 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 BQ625086|BQ625086.1 USDA-FP_02177 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_02177 5', mRNA sequence. - 251 270 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 151 370 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 CK739939|CK739939.1 USDA-FP_6761 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68B12 5', mRNA sequence. - 384 403 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCAA 284 472 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 CK740070|CK740070.1 USDA-FP_6564 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65A12 5', mRNA sequence. - 63 82 CTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 1 182 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 CK937107|CK937107.1 CGF1004514_B07 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_B07 5', mRNA sequence. - 487 506 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 387 606 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 CK939692|CK939692.1 CGF1004746_H02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_H02 5', mRNA sequence. - 532 551 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 432 651 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 DC892093|DC892093.1 Citrus limon mRNA, clone: LLL0956, 5'-end sequence, expressed in leaf. - 144 163 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTC 44 238 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EX449374|EX449374.1 Volcani_8_06_H10 Volcani08 Citrus reticulata x Citrus temple cDNA, mRNA sequence. - 523 542 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCCAAAAAAAAAAAATTAAAAAACAATAATACCTT 423 642 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY725622|EY725622.1 CS00-C3-703-036-H07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence. - 683 702 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAAAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAAGTAAATCTATTCTTTGGTGTTAAAAAAAAAAAAAAAAAAAAA 583 789 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY735838|EY735838.1 CS00-C3-705-005-G02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence. - 449 468 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAAAAAAAAAAAAAAAAANNNNANNNNNNNNAAAAAAANNNNAAAAAAAAGGN 349 568 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY755355|EY755355.1 CS12-C1-001-027-C05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence. - 134 153 GTTGGGTGTTTTTGGTTCTATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 34 253 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY755596|EY755596.1 CS12-C1-001-030-C10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence. - 133 152 GTTGGGTGTTTTTGGTCTCTTCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 33 252 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY758006|EY758006.1 CS13-C1-001-030-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence. - 359 378 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCTGTTTCTTGACTCATGTTTCCTCTCTGTGCAAT 259 478 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY778348|EY778348.1 CR05-C1-103-043-H10-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence. - 487 506 GTTGGGTGTTTTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAAGAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTTTCAACGGGAAGAGGAAGACGAAATAAGCCAGAC 387 604 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0 EY787869|EY787869.1 CR05-C3-700-090-F10-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence. - 492 511 GTTGGGTGTATTTGGTCTCATCTGGGCCCTCTACATTCCTTACGCTTCCAGTCTTGATGAAGATGAAGAGTCCGGATTGTCCCTCTAACAGTCCGAAGTCTAAAGCCAAACCCCTTGTTGGTAGAAATGTAAACAGTTTGGCCTTTTTCCTTAAATTTGTTTTAGTAAAATCTATCTTTTGTGTGTCTGTATCTTGACTAGAAAAAAAAAAAAAAAAAAA 392 611 TAAAGCCAAACCCCTTGTTG TAAAGCCAAACCCCTTGTTG |||||||||||||||||||| ==================== 20 0 0 0