# [ GGGenome | 2025-04-06 01:19:15 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CAAGAGAGCCATAACCAAAG # count: 5 # query: CTTTGGTTATGGCTCTCTTG # count: 17 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FX671843|FX671843.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_11673. + 416 435 GGTGTACCTCTGTGATCAATGCAAGCAAGATCAAAGACACGTTTATATCCCTTGATGAAACCCAACACTTTCTCGTCGTAATGAAATCCTGGGTTCCACACAAGAGAGCCATAACCAAAGACCCACATCACCATCTTCTGCAGTTAAATGCGTCAGGGACGATCTTCGTGAAGAGAAAAACGCAATCCCACGGGTAGACAAGATCTCCTCCCGTAAATAA 316 535 CAAGAGAGCCATAACCAAAG CAAGAGAGCCATAACCAAAG |||||||||||||||||||| ==================== 20 0 0 0 FX749915|FX749915.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_43496. + 618 637 GGTGTACCTCTGTGATCAATGCAAGCAAGATCAAAGACACGTTTATATCCCTTGATGAAACCCAACACTTTCTCGTCGTAATGAAATCCTGGGTTCCACACAAGAGAGCCATAACCAAAGACCCACATCACCATCTTCTGCAGTTAAATGCGTCAGGGACGATCTTCGTGAAGAGAAAAACGCAATCCCACGGGTAGACAAGATCTCCTCCCGTAAATAA 518 737 CAAGAGAGCCATAACCAAAG CAAGAGAGCCATAACCAAAG |||||||||||||||||||| ==================== 20 0 0 0 JT785290|JT785290.1 TSA: Raphanus sativus RS00743 mRNA sequence. + 849 868 GGTGTACCTCTGTGATCAATGCAAGCAAGATCAAAGACACGTTTATATCCCTTGATGAAACCCAACACTTTCTCGTCGTAATGAAATCCTGGGTTCCACACAAGAGAGCCATAACCAAAGACCCACATCACCATCTTCTGCAGTTAAATGCGTCAGGGACGATCTTCGTGAAGAGAAAAACGCAATCCCACGGGTAGACAAGATCTCCTCCCGTAAATAA 749 968 CAAGAGAGCCATAACCAAAG CAAGAGAGCCATAACCAAAG |||||||||||||||||||| ==================== 20 0 0 0 LR778314|LR778314.1 Raphanus sativus genome assembly, chromosome: 5. + 3277588 3277607 AAAAAAAAGGGATAAGGAGTGTTACCAAGATCAAAGACACGTTTATATCCCTTGATGAAACCCAACACTTTCTCGTCGTAATGAAATCCTGGGTTCCACACAAGAGAGCCATAACCAAAGACCCACATCACCATCTTCTGCAGTTAAATGCTGTAAACACGTTAAAAAAAAAAAAAACTAAGATTAATATATAAAATGATTTTGTGGAGGGTAAATGCCG 3277488 3277707 CAAGAGAGCCATAACCAAAG CAAGAGAGCCATAACCAAAG |||||||||||||||||||| ==================== 20 0 0 0 OY755212|OY755212.1 Draba incana genome assembly, chromosome: 11. + 11327515 11327534 TCTTGACAAAAAAAAAAAGTGTTACCAAGATCAAAGACACGTTTATATCCCTTGATGAAACCTAACACTTTCTCATCGTAGTGAAATCCTGGGTTCCACACAAGAGAGCCATAACCAAAGACCCACATCACCATTTTCTGCAGTTAAATGCTGTAAAACACCAAAAGACAAATTCTAAGATTAAGACACAAGTCACAAAATTTTGTGGAGAGTAAATGCT 11327415 11327634 CAAGAGAGCCATAACCAAAG CAAGAGAGCCATAACCAAAG |||||||||||||||||||| ==================== 20 0 0 0 CX272589|CX272589.1 39RDBRT_UP_042_E11_21JUL2004_087 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence. - 283 302 TTTCTCGCGTTGTAAACTTGTAATCTAATCCAATCACGAGCGGAGATTGAGCTTTTTCGTGTTCGACGCATTTATAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGGTTTCACTACGATGAGAAAGTGTTGGGTTTCATCAAGGGTTATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 183 402 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 EV552098|EV552098.1 RR3BE06TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 292 311 TTTTAATTTACGAGAGGAGATCTTGTCTACCCGTGGGATTGCGTCTTTCTCTTCACAAAGATCGTCCCCGACGTTAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGATGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 192 411 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 EX889393|EX889393.1 RS1CG35TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 339 358 ACCAAGATCGTCCCCGACGGTAACGTCTTGATTTTGATTTATTTGGGTCTCCTCTCCTCCAGCATTTAAGCAGTTAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGATGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 239 458 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 EY921158|EY921158.1 RR4D104TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. - 296 315 CAGCTTTTTCGGGTTTTAATTTACGAGAAGAGATCTTGTCTACCCGTGGGATTGAAGATCATTCCCGACGCAATTAACTGCCGAAGATGGTAATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCACTACGATGAGAAAGTGCTTGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 196 415 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 EY929918|EY929918.1 RS1D488TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 300 319 TAATTTACGAGAGGAGATCTTGTCTACCCGTGGAATTGCGTTTTCCTCTTCACCAAGATCGTCCCCGACGCAGTTAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGATGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 200 419 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FD549863|FD549863.1 RR3F078TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 293 312 TTTTAATTTACGAGAGGAGATCTTGTCTACCCGTGGGATTGCGTTTTTCTCTTCACAAAGATCGTCCCTGACGTTAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGATGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 193 412 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FY428346|FY428346.1 Raphanus sativus mRNA, clone: RSCF02C08, 5' end sequence. - 252 271 TTATTTACGGGAGGAGATCTTGTCTACCCGTGGGATTGCGTTTTTCTCTTCACGAAGATCGTCCCTGACGCATTTAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGACGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 152 371 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FY435145|FY435145.1 Raphanus sativus mRNA, clone: RSCL06O04, 5' end sequence. - 239 258 TTTTTTCGGGTTTTTATTTACGGGAGGAGATCTTGTCTACCCGTGGGATTGCGTTTTTCTCTTCACGAAGATCGTCCCTGACGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGACGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 139 358 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FY436530|FY436530.1 Raphanus sativus mRNA, clone: RSCL11A01, 5' end sequence. - 250 269 TTTTTTCGGGTTTTTATTTACGGGAGGAGATCTTGTCTACCCGTGGGATTGCGTTTTTCTCTTCACGAAGATCGTCCCTGACGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGACGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 150 369 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FY438152|FY438152.1 Raphanus sativus mRNA, clone: RSCL15N24, 5' end sequence. - 239 258 TTTTTTCGGGTTTTTATTTACGGGAGGAGATCTTGTCTACCCGTGGGATTGCGTTTTTCTCTTCACGAAGATCGTCCCTGACGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGACGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACC 139 358 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 DH635551|DH635551.1 Rattus norvegicus DNA, BAC clone: RNB1-173D15, 3'end. - 478 497 AGCAATGTCACTGGCGGGTGGGGCACCTTGAGTACAGAAAGGGGGACAAGGTCAGGATCCAGTCCTGCCTGCACTGAGGGTGGCCTTGAGCAAGGTATGCCTTTGGTTATGGCTCTCTTGAGTCTCCTTATGTAGATCAGATGGAGAAAGAAGTGATGGGCCTGAGGGCCTCCTCCAGCCCAGCCCCCAACATACACAAGGGAGTGGGGGGCCCTTCAGG 378 597 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FT004161|FT004161.1 Rattus norvegicus DNA, BAC clone: RNB2-007A17, 3' end. - 478 497 AGCAATGTCACTGGCGGGTGGGGCACCTTGAGTACAGAAAGGGGGACAAGGTCAGGATCCAGTCCTGCCTGCACTGAGGGTGGCCTTGAGCAAGGTATGCCTTTGGTTATGGCTCTCTTGAGTCTCCTTATGTAGATCAGATGGAGAAAGAAGTGATGGGCCTGAGGGCCTCCTCCAGCCCAGCCCCCAACATACACAAGGGAGTGGGGGGCCCTTCAGG 378 597 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 FT101051|FT101051.1 Rattus norvegicus DNA, BAC clone: RNB2-271D01, 5' end. - 478 497 AGCAATGTCACTGGCGGGTGGGGCACCTTGAGTACAGAAAGGGGGACAAGGTCAGGATCCAGTCCTGCCTGCACTGAGGGTGGCCTTGAGCAAGGTATGCCTTTGGTTATGGCTCTCTTGAGTCTCCTTATGTAGATCAGATGGAGAAAGAAGTGATGGGCCTGAGGGCCTCCTCCAGCCCAGCCCCCAACATACACAAGGGAGTGGGGGGCCCTTCAGG 378 597 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 AC118445|AC118445.3 Rattus norvegicus clone CH230-362A3, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces. - 48139 48158 AGCAATGTCACTGGCGGGTGGGGCACCTTGAGTACAGAAAGGGGGACAAGGTCAGGATCCAGTCCTGCCTGCACTGAGGGTGGCCTTGAGCAAGGTATGCCTTTGGTTATGGCTCTCTTGAGTCTCCTTATGTAGATCAGATGGAGAAAGAAGTGATGGGCCTGAGGGCCTCCTCCAGCCCAGCCCCCAACATACACAAGGGAGTGGGGGGCCCTTCAGG 48039 48258 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 AC130960|AC130960.4 Rattus norvegicus clone CH230-34F2, WORKING DRAFT SEQUENCE, 4 ordered pieces. - 181961 181980 AGCAATGTCACTGGCGGGTGGGGCACCTTGAGTACAGAAAGGGGGACAAGGTCAGGATCCAGTCCTGCCTGCACTGAGGGTGGCCTTGAGCAAGGTATGCCTTTGGTTATGGCTCTCTTGAGTCTCCTTATGTAGATCAGATGGAGAAAGAAGTGATGGGCCTGAGGGCCTCCTCCAGCCCAGCCCCCAACATACACAAGGGAGTGGGGGGCCCTTCAGG 181861 182080 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 OY743208|OY743208.1 Raphanus sativus genome assembly, chromosome: 2. - 40340548 40340567 CGGCATTTACCCTCCACAAAATCATTTTATATATTAATCTTAGTTTTTTTTTTTTTTAACGTGTTTACAGCATTTAACTGCAGAAGATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCATTACGACGAGAAAGTGTTGGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGGTAACACTCCTTATCCCTTTTTTTT 40340448 40340667 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0 OY755210|OY755210.1 Draba incana genome assembly, chromosome: 9. - 26688814 26688833 AGCATTTACTCTCCATAAAATTTTGTGACTTGTGTCTTAATCTTAGAATTTGTCTTTTGGTGTTTTACAGCATTTAACTGCAGAAAATGGTGATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCACTACGATGAGAAAGTGTTAGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGGTAACATTTTTTTTTTTTTTTTGTT 26688714 26688933 CTTTGGTTATGGCTCTCTTG CTTTGGTTATGGCTCTCTTG |||||||||||||||||||| ==================== 20 0 0 0