# [ GGGenome | 2026-03-05 22:40:45 ] # database: DDBJ release 139.0 (Sep, 2025) # query: CAATCACATTGATGCCAACT # count: 8 # query: AGTTGGCATCAATGTGATTG # count: 12 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins BQ411825|BQ411825.1 GA__Ed0043B08r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0043B08r, mRNA sequence. + 72 91 TTTTTTTTTTTTTTTTTTAAAATCAAACATACAATTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACTTTCTTACA 1 191 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 DT048657|DT048657.1 COT_DD_B08 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (AY138252) phospholipase D delta isoform 1a [Gossypium hirsutum], mRNA sequence. + 62 81 TGCAGAGTAAAACTCAAACATACCCTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACGAGNCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCA 1 181 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 DT048771|DT048771.1 COT_DE_F08 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to unknown, mRNA sequence. + 48 67 ATCAACATACCCTTTATCATTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCA 1 167 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 DT048773|DT048773.1 COT_DE_F10 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (AY138252) phospholipase D delta isoform 1a [Gossypium hirsutum], mRNA sequence. + 75 94 TTTTTTTTTTTTTTGCAGAGTAAAATCAAACATACCCTTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCA 1 194 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 CP106707|CP106707.1 Gossypium herbaceum isolate GPA1alz chromosome 2. + 283830 283849 TTACAAACAAAAACTAAGTACACAATGAAGAAATGGATGGCAAGAGTAAAATCAAACATACCCTTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCA 283730 283949 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 HQ527784|HQ527784.1 Gossypium herbaceum clone NBRI_C_EYT27PB01APF00 simple sequence repeat marker, mRNA sequence. + 75 94 TTTTTTTTTTTTTTTAAAAATTTACAAACATACCCTTTATTTCATTTGGTTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATTACATACATACATACATACATACAACGACGCACAT 1 194 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 OZ077506|OZ077506.1 Stewartia floridana genome assembly, chromosome: 7. + 69485011 69485030 GTGGGAGAGACAAAAAGCAAGGGTTATCTTCTACGATACCTCACATAAGCAAAAATGACAGACTTTTTTGTTGTTCACAACGGCTAAAGAGCATTGCTAACAATCACATTGATGCCAACTTGATGATAAAGCAGTACACTTTTTTCTGATACTTACACCAGCTTTCTCAAAATATTGGTTCAAACACTTTTATAAGAATCTATTCTTCACATTTCGCGCA 69484911 69485130 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 OZ077513|OZ077513.1 Stewartia floridana genome assembly, chromosome: 14. + 11741845 11741864 GGGAGAGACAAAATGCAAGTGTTTATCTTCTACGATACCTCACATAAGCAAAAATGACAGACTTTTTTTGTTGTTCACAAAGGCTAAAGAGCATTGCTAACAATCACATTGATGCCAACTTGATGATAAAGCGGTACGCTGTTTTCAGATACTTAGACCAGCTTTCTCAAAATATTGGTTCAAACACTTTTATAAGAATCTATTCTTCACATTTTGCACA 11741745 11741964 CAATCACATTGATGCCAACT CAATCACATTGATGCCAACT |||||||||||||||||||| ==================== 20 0 0 0 DN758637|DN758637.1 G.hir-stem 1141 PCR amplified cotton stem cDNA Gossypium hirsutum cDNA, mRNA sequence. - 531 550 TGTATGTATGTATGTATGTATGTATGATGTATGTAATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTT 431 602 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 DW513770|DW513770.1 GH_TMIRS_176_A07_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence. - 271 290 TCTGTTCTTAGTTCTTTGTTGAGGCATTAGTTTGCAAAAAATGTGCGTCGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAGGGGGGAGATCTCTCAT 171 342 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 EW779659|EW779659.1 OoSal082 Asian rice gall midge salivary gland cDNA library Orseolia oryzae cDNA, mRNA sequence. - 519 538 GCAAGAAATCTTGGTGAAGAAACCAGGTATAGTGCACCCATAGCAGCTTTATGTACTGGTGGTGTGACGGGTATTGTTGCTTTTATCTCCGCTTGTTGTCAGTTGGCATCAATGTGATTGGTATAGATATCTGATATTTACACATCTTTATCTATACATATATACTAAAAGCATATCTATTTTAAACACTGGAAGAGAAATACTAAACTATGATAGAAAA 419 638 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 JG454731|JG454731.1 2P12-A3-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence. - 374 393 TGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTTACTCTTG 274 453 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 JK795586|JK795586.1 E04-54E04 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. - 613 632 AAAAAATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTT 513 685 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 CP106694|CP106694.1 Gossypium herbaceum isolate Zhongcao1 chromosome 2. - 94567713 94567732 AATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTTACTCTTGCCATCCATTTCTTCATTGTGTACTTAGTTTTTGTTTGTAA 94567613 94567832 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 HQ527790|HQ527790.1 Gossypium herbaceum clone NBRI_A2_652 simple sequence repeat marker, mRNA sequence. - 397 416 ATGTGCGTCNGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTT 297 469 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 HQ527791|HQ527791.1 Gossypium herbaceum clone NBRI_B_1426 simple sequence repeat marker, mRNA sequence. - 142 161 AATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTTAAAAAAAAAAAAAAAACCGAC 42 235 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 OZ077505|OZ077505.1 Stewartia floridana genome assembly, chromosome: 6. - 98249473 98249492 TGCGCGAAATATAAAGAATAGATTCTTATAAAAGTGTTTGACCCAATAATTTGACAAAGCTGGTGTAAGTATCTGAAAACATTGTACTGCTTTATCATCAAGTTGGCATCAATGTGATTGTTAGCAATGCTCTTTAGCCGTTGTGAACAACAAAAAGTCTGTCATTTTTGCTTATGTTAGGTATCGTAGAAGATAAACCCTTGCCTTTTGTCTCTCCCAC 98249373 98249592 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 OZ077506|OZ077506.1 Stewartia floridana genome assembly, chromosome: 7. - 46872002 46872021 TGCGCGAAATGTAAAGAATAGATTCTTATAAAAGTGTTTGACCCAGTAATTTGAGAAAGCTGGTGTAAGTATCTGAAAACATTGTACTGCTTTATCATCAAGTTGGCATCAATGTGATTGTTAGCAATGCTCTTTAGCCGTTGTGAACAACAAAAAGTCTGTCTTTTTGCTTATGTTAGGTATCTTAGAAGATAAACCCTTGCCTTTTGTCTCTCCCACA 46871902 46872121 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 OZ077511|OZ077511.1 Stewartia floridana genome assembly, chromosome: 12. - 57038104 57038123 TGTACAAAATGTGAAGAATAGATTCTTATAAAAGTGTTTGAACCAATATTTTGAGAAAGCTGGTGTAAGTATCTGAAAACAGTGTACTGCTTTATCATCAAGTTGGCATCAATGTGATTGTTAGCAATGCTCTTTAGCCGTTCTGGATAACAAAAAAAAAAGTCTGTCATTTTTGCTTATGTGAGGTATCGAAGAAGATAAACACTTGCATTTTGTTTCT 57038004 57038223 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0 OZ238935|OZ238935.1 Platalea leucorodia genome assembly, chromosome: 5. - 25464365 25464384 GCTGAAGTCCTTTACCTCTGAGGCTCTAGAAATACCTAATCCAGAACAACTCCCACATTACTCTCTGAGTTGACTAAAATCAGGTCTCGCATTACAAAAAAGTTGGCATCAATGTGATTGTAAACTTATACCTGTGGCCATGACCTCTACCTTGCTGTAATCGCCTGTTATTCGTGCTGTTTCCCTGGTTTCCACCCATAAGATCTTTCTTGCTAAAAAA 25464265 25464484 AGTTGGCATCAATGTGATTG AGTTGGCATCAATGTGATTG |||||||||||||||||||| ==================== 20 0 0 0