# [ GGGenome | 2025-04-04 07:15:03 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CACGCTCTTGACTTTCTCCC # count: 16 # query: GGGAGAAAGTCAAGAGCGTG # count: 2 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CV704760|CV704760.1 UCRPT01_0005O03_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0005O03, mRNA sequence. + 36 55 GAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACGCAAAGC 1 155 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 DY263223|DY263223.1 IC0AAA11AF07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 35 54 AAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGCATAAGCAACAGCACAAA 1 154 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 DY265135|DY265135.1 IC0AAA16BH04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 47 66 AAAATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGTA 1 166 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 DY270267|DY270267.1 IC0AAA29BB06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 35 54 AAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 1 154 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 DY281841|DY281841.1 IC0AAA55AC07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 44 63 ATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGCATAAGCAACAGCACAAA 1 163 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 DY289781|DY289781.1 IC0AAA73CC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 28 47 AAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 1 147 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 DY297637|DY297637.1 IC0AAA93BC01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 141 160 GTGCCCGTATTTCTTTTACAATTTTCCCCTCGAAATCTCTTCTCACTTTCCGGGAAAATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 41 260 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 EY792629|EY792629.1 CR05-C3-700-144-G11-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence. + 46 65 AAATTAAATAGAAAATAAAAATATTTTAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGCATAAGCAACAGCACAAA 1 165 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC878215|FC878215.1 IC0AAA55AC07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AC07, mRNA sequence. + 44 63 ATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGCATAAGCAACAGCACAAA 1 163 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC887243|FC887243.1 IC0AAA93BC01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA93BC01, mRNA sequence. + 141 160 GTGCCCGTATTTCTTTTACAATTTTCCCCTCGAAATCTCTTCTCACTTTCCGGGAAAATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 41 260 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC887611|FC887611.1 IC0AAA73CC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73CC06, mRNA sequence. + 28 47 AAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 1 147 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC893464|FC893464.1 IC0AAA11AF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA11AF07, mRNA sequence. + 35 54 AAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGCATAAGCAACAGCACAAA 1 154 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC899335|FC899335.1 IC0AAA66CH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA66CH02, mRNA sequence. + 44 63 ATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 1 163 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC899961|FC899961.1 IC0AAA16BH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA16BH04, mRNA sequence. + 47 66 AAAATTAAATAGAAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTCCACCATGACGACGAGTTAGGTA 1 166 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC911580|FC911580.1 IC0AAA29BB06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA29BB06, mRNA sequence. + 35 54 AAAAATAAAAATATCGAACACGAGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACG 1 154 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 FC921636|FC921636.1 C32107F02EF RVDevelopN Citrus clementina cDNA clone C32107F02, mRNA sequence. + 13 32 GGTCGCACACAGCACGCTCTTGACTTTCTCCCTAACCAAACATCCTCTCTCTCTCTCTCTCGCTTTATCCTTCAGTCTCTTCTACACCATGACGACGAGTTAGGTATAAGCAACAGCACAAACACGCAAAGC 1 132 CACGCTCTTGACTTTCTCCC CACGCTCTTGACTTTCTCCC |||||||||||||||||||| ==================== 20 0 0 0 OY754326|OY754326.1 Citrus sinensis genome assembly, chromosome: 9. - 4164505 4164524 TGCTTATGCCTAACTCGTCGTCATGGTGGAGAAGAGACTGAAGGATAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGATGTTTGGTTAGGGAGAAAGTCAAGAGCGTGCTGTGTGCGACTCGTGTTCGATATTTTTATTTTTCTATTTAATTTTCCCGGAAAGTGAGAAGAGATTTCGAGGGGAAAATTGTAAAAGAAATACGGGCAC 4164405 4164624 GGGAGAAAGTCAAGAGCGTG GGGAGAAAGTCAAGAGCGTG |||||||||||||||||||| ==================== 20 0 0 0 OX359246|OX359246.1 Allacma fusca genome assembly, chromosome: 2. - 17492411 17492430 ATAAAATTTTCAAATCTAGGTATTTTTTTCAAGGAAAATTTTAAAAGTAGGAGGGAAAGCTCAAGTGAGGAAATGCATCTCAGAATTCTCTCCAGGAATTGGGAGAAAGTCAAGAGCGTGAAAATACATAGAGGAGTCAAAAGGGAAGGGAATTGAATGAAACTTTTTGATTCCATTCATTCTAAATTCCCGCCACTGCTCAGACCTCTTCCCTATCAGG 17492311 17492530 GGGAGAAAGTCAAGAGCGTG GGGAGAAAGTCAAGAGCGTG |||||||||||||||||||| ==================== 20 0 0 0