# [ GGGenome | 2025-03-15 06:50:51 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CACGTTGTGGAATCTCGGATTA # count: 5 # query: TAATCCGAGATTCCACAACGTG # count: 16 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FD574108|FD574108.1 RS2F951JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence. + 400 421 TTTGTCCTTTAGACAAGGTTATACGATCTTTGCCTGAAGTGTATGTTCTTGCACGTGCCGGCGTTTTGCAATTGTTGTACCCTGCACTATCTACCGCCACCACGTTGTGGAATCTCGGATTATAGTTAAACACTAGAATATCATTGGCTTTAAAATGTTTGCCTTTCGGCCAACCCACAGCTTAAAGGCCC 300 490 CACGTTGTGGAATCTCGGATTA CACGTTGTGGAATCTCGGATTA |||||||||||||||||||||| ====================== 22 0 0 0 FD935530|FD935530.1 RS1GD76JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence. + 415 436 TTTGTCCTTTAGACAAAGTTATGCGATCTTTGCCTGAAGTGTATGTTCTTGCACGTGCCGGCGTTTTGCAATTGTTGTACCCTGCATTATCTACCGCCACCACGTTGTGGAATCTCGGATTATAGTTAAACACTAGAACATCATTGGCTTTAAAATGTTTGCCTTTCGGCCAACCCACAGCGTTAAAGGCCCAGACGTTGGATTCGCCGACTGTGTAAGTCG 315 536 CACGTTGTGGAATCTCGGATTA CACGTTGTGGAATCTCGGATTA |||||||||||||||||||||| ====================== 22 0 0 0 FX674765|FX674765.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_9637. + 272 293 TTTGTCCTTTAGACAAAGTTATACGATCTTTGCCTGAAGTGTATGTTCTTGCACGTGCCGGCGTTTTGCAATTGTTGTACCCTGCACTATCTACCGCCACCACGTTGTGGAATCTCGGATTATAGTTAAACACTAGAACATCATTGGCTTTAAAATGTTTGCCTTTCGGCCAACCCACAGCGTTAAAGGCCCAGACGTTGGATTCGCCGACTGTGTAAGTCG 172 393 CACGTTGTGGAATCTCGGATTA CACGTTGTGGAATCTCGGATTA |||||||||||||||||||||| ====================== 22 0 0 0 FX778757|FX778757.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_24895. + 137 158 TTTGTCCTTTAGACAAAGTTATACGATCTTTGCCTGAAGTGTATGTTCTTGCACGTGCCGGCGTTTTGCAATTGTTGTACCCTGCACTATCTACCGCCACCACGTTGTGGAATCTCGGATTATAGTTAAACACTAGAACATCATTGGCTTTAAAATGTTTGCCTTTCGGCCAACCCACAGCGTTAAAGGCCCAGACGTTGGATTCGCCGACTGTGTAAGTCG 37 258 CACGTTGTGGAATCTCGGATTA CACGTTGTGGAATCTCGGATTA |||||||||||||||||||||| ====================== 22 0 0 0 JT791921|JT791921.1 TSA: Raphanus sativus RS07374 mRNA sequence. + 264 285 TTTGTCCTTTAGACAAAGTTATACGATCTTTGCCTGAAGTGTATGTTCTTGCACGTGCCGGCGTTTTGCAATTGTTGTACCCTGCACTATCTACCGCCACCACGTTGTGGAATCTCGGATTATAGTTAAACACTAGAACATCATTGGCTTTAAAATGTTTGCCTTTCGGCCAACCCACAGCGTTAAAGGCCCAGACGTTGGATTCGCCGACTGTGTAAGTCG 164 385 CACGTTGTGGAATCTCGGATTA CACGTTGTGGAATCTCGGATTA |||||||||||||||||||||| ====================== 22 0 0 0 EV567950|EV567950.1 RR4AS02TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. - 143 164 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 43 264 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 EV568908|EV568908.1 RR4B241TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. - 143 164 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 43 264 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 EX904163|EX904163.1 RS3C518TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. - 259 280 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 159 380 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 EX904357|EX904357.1 RS3C754TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. - 252 273 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 152 373 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 EY899080|EY899080.1 RR1DQ82TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence. - 264 285 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 164 385 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 EY933243|EY933243.1 RS1E652TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 259 280 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTATCTAAAGGACAAC 159 380 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD533837|FD533837.1 RR1F046TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence. - 258 279 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 158 379 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD570018|FD570018.1 RS2F951TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 258 279 GCGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAAGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATATTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACCTTGTCTAAAGGACAAA 158 379 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD576815|FD576815.1 RS3EI84TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. - 259 280 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCTGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 159 380 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD937836|FD937836.1 RS1FV56TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 260 281 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCCGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTATCTAAAGGACAAC 160 381 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD939399|FD939399.1 RS1GD76TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 262 283 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGCATAACTTTGTCTAAAGGACAAA 162 383 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD978215|FD978215.1 RR3FY35TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 261 282 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 161 382 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FD982226|FD982226.1 RR3H962TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 259 280 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAATGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 159 380 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 FY442848|FY442848.1 Raphanus sativus mRNA, clone: RSCR10D10, 5' end sequence. - 211 232 CGACTTACACAGTCGGCGAATCCAACGTCTGGGCCTTTAACGCTGTGGGTTGGCCGAAAGGCAAACATTTTAAAGCCAATGATGTTCTAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGATACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 111 332 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 LR778310|LR778310.1 Raphanus sativus genome assembly, chromosome: 1. - 16265087 16265108 CACTAAAATTCCAATATATGGAAGAGCCGTAGTCGTAGAGTAAACAATAAATTTAAATAACAAACTTACTACTTTAAATACTTTTTGCAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 16264987 16265208 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0 OY743212|OY743212.1 Raphanus sativus genome assembly, chromosome: 6. - 16265087 16265108 CACTAAAATTCCAATATATGGAAGAGCCGTAGTCGTAGAGTAAACAATAAATTTAAATAACAAACTTACTACTTTAAATACTTTTTGCAGTGTTTAACTATAATCCGAGATTCCACAACGTGGTGGCGGTAGATAGTGCAGGGTACAACAATTGCAAAACGCCGGCACGTGCAAGAACATACACTTCAGGCAAAGATCGTATAACTTTGTCTAAAGGACAAA 16264987 16265208 TAATCCGAGATTCCACAACGTG TAATCCGAGATTCCACAACGTG |||||||||||||||||||||| ====================== 22 0 0 0