# [ GGGenome | 2025-04-05 00:32:48 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CACTGTACTTGCAGAGGTTT # count: 14 # query: AAACCTCTGCAAGTACAGTG # count: 18 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins BY807378|BY807378.1 Thellungiella halophila cDNA clone: RTFL01-11-F08, 3'end sequence. + 269 288 AGCCGATTTGGCTTCAGTAAAAAAGATAAAAAGCCCGAGATTATTGTCTCCGACATGATCCAAGTATCGTAACTTGAGCCAAATTCTTTAAACGTTTAACCACTGTACTTGCAGAGGTTTTCGAAACCCATGTACTCGTGCCGTTGGTATTTGCCGATCATGTTCACTATTCCCACGCCACCTAAGAACAAATGATATCTAAAATTGAACATCTTCCAAA 169 388 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 BY833025|BY833025.1 Thellungiella halophila cDNA clone: RTFL01-49-D22, 3'end sequence. + 264 283 AGCCGATTTGGCTTCAGTAAAAAAGATAAAAAGCCCGAGATTATTGTCTCCGACATGATCCAAGTATCGTAACTTGAGCCAAATTCTTTAAACGTTTAACCACTGTACTTGCAGAGGTTTTCGAAACCCATGTACTCGTGCCGTTGGTATTTGCCGATCATGTTCACTATTCCCACGCCACCAAGCGATATCGCGCTGATAAAAATCATGGAGGCAAGGA 164 383 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 FD953106|FD953106.1 RS3GV75JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence. + 304 323 AACTTTCACAAGCTATACTTGCTGAGTTTCAGTTCAGTTAAAATAGGTCAACATCCGGGAGATATCTTCTTTGACATGATCCAAATTCTTAAACGTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGGAGCTTGCCCATCATGTTCACTATCCCCACGCCCCCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCCAGGA 204 423 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 FD984008|FD984008.1 RR4GI47JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence. + 243 262 AACTTTCACAAGCTATACTTACTGAGTTTCAGTTCAGTTAAAATAGGTCAAAATCCGAGAGATATCGTCTTTGACATGATCCAAATTCTTAAACGTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGGAGCTTGCCCATCATGTTCACTATCCCCACGCCACCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCCAGGA 143 362 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 HO924710|HO924710.1 0270941 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence. + 249 268 AGCTATACTTTACTGAGTAGAGACGACTTGGCTTCAGTTAAAAATAGGTAAAAAATCCGAGATATTTTCTTTGACATTATCCAGATTGTTAAACCTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGTAACTTGCCCATCATGTTCACTATTCCCACGCCACCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCGAGGA 149 368 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 HO949843|HO949843.1 0270979 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence. + 230 249 CAAGCTATACTTACTGAGCAGAGACGACTTGGCTTCAGTTAAAAATAGGTAAAATCTGGAGAGATAGTCTTTGACATGATCCAGATTCTTAAACGTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGTAACTTGCGCCGGGTGTTCGCGATTCCCACGCCACCAAGTGATATCGCGCTGATAAAAATCGTAGAGGCCAGGA 130 349 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 HO960679|HO960679.1 0264076 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence. + 205 224 AGCTATACTTTACTGAGTAGAGACGACTTGGCTTCAGTTAAAAATAGGTAAAAAATCCGAGATATTTTCTTTGACATTATCCAGATTGTTAAACCTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGTAACTTGCCCATCATGTTCACTATTCCCACGCCACCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCGAGGA 105 324 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 FX658324|FX658324.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_15280. + 175 194 AACTTTCACAAGCTATACTTGCTGAGTTTCAGTTCAGTTAAAATAGGTCAACATCCGGGAGATATCTTCTTTGACATGATCCAAATTCTTAAACGTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGGAGCTTGCCCATCATGTTCACTATCCCCACGCCCCCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCCAGGA 75 294 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 FX697125|FX697125.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_16552. + 251 270 ACAAGCTATACTTTACTGAGTAGAGACGACTTGGCTTCAGTTAAAAATAGGTAAAAATCCGAGATATTTTCTGACATGATCCATATTGTTAAACCTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGCAACTTGCCCATCATGTTCACTATTCCCACGCCACCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCGAGGA 151 370 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 FX768075|FX768075.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_69115. + 117 136 AACTTTCACAAGCTATACTTGCTGAGTTTCAGTTCAGTTAAAATAGGTCAACATCCGGGAAATATCTTCTTTGACATGATCCAAATTCTTAAACGTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGGAGCTTGCCCATCATGTTCACTATCCCCACGCCACCAAGTGATATGGCGCTGATAAAAATCGTGGAGGCCAGGA 17 236 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 FJ789639|FJ789639.1 Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 882 unordered pieces. + 4044438 4044457 ACAAGCTATACTTTACTGAGTAGAGACGACTTGGCTTCAGTTAAAAATAGGTAAAAATCCGAGATATTTTCTGACATGATCCATATTGTTAAACCTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGCAACTTGCCCATCATGTTCACTATTCCCACGCCACCTAATAACAAATATAACATTACACATCTACTCAAGGTGA 4044338 4044557 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. + 15359112 15359131 AACTTTCACAAGCTATACTTGCTGAGTTTCAGTTCAGTTAAAATAGGTCAACATCCGGGAAATATCTTCTTTGACATGATCCAAATTCTTAAACGTTAACCACTGTACTTGCAGAGGTTTTCAAAACCCATGTACTCGTGCCGTTGGAGCTTGCCCATCATGTTCACTATCCCCACGCCACCTAATAACAAATATAACATTACAAAATTTACACATCTAC 15359012 15359231 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 OZ000470|OZ000470.1 Cardamine chenopodiifolia genome assembly, chromosome: 12. + 16775778 16775797 TGGTGAGTATAGCCGATTTGGCATAAGCTAAACAAAGCAGAGAACAAGCCTATGGTTTAAGAATCCTAACTTGAGCCACAAAATTCTTAAAAACGTTAGCCACTGTACTTGCAGAGGTTTTCAAAACCCATATACTCATGCCGTTGGAATTTGCCAATCATGTTCACTATTACCACACCGCCTACAAACAAAAGAAACAACCATAACAAAATTACAAATT 16775678 16775897 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 OV277348|OV277348.1 Sicus ferrugineus genome assembly, chromosome: 1. + 36413897 36413916 AAGTCTATCGCCCACACGTAACAGACCGTTCGAATCAATAAATGGTGAGTTTGAGTAGTGGATCCTTTTTATAAAGCATTTGTTGACCTAACAACTGCGTCACTGTACTTGCAGAGGTTTTTCTCTGTACGGCTATAAGTACTCTCACTTTGGCTGAATGCAGTTCTTCAAATGTAGGAGAGCCCTTAACTGCCTTAAGTCTACGTTGCAAAGTCAACAT 36413797 36414016 CACTGTACTTGCAGAGGTTT CACTGTACTTGCAGAGGTTT |||||||||||||||||||| ==================== 20 0 0 0 DK534913|DK534913.1 Brassica oleracea var. viridis mRNA, clone: KALE-051L08, 3' end sequence. - 546 565 TCCTCGCCTCCACGATTTTTATCAGCGCCATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAAGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGTTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTG 446 665 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 DK541943|DK541943.1 Brassica oleracea var. viridis mRNA, clone: KALE-070B14, 3' end sequence. - 512 531 TCCTCGCCTCCACGATTTTTATCAGCGCCATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAAGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGTTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTG 412 631 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 DK570762|DK570762.1 Brassica oleracea var. viridis mRNA, clone: KALE-145I13, 3' end sequence. - 493 512 TCCTCGCCTCCACGATTTTTATCAGCGCCATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAAGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGTTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTG 393 612 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 ES993170|ES993170.1 BNAEN3GH_UP_006_D05_31MAY2006_041 Brassica napus BNAEN3GH Brassica napus cDNA 5', mRNA sequence. - 188 207 TCCTCGCCTCCACGATTTTTATCAGCGCCATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTACAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGT 88 215 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 HO948043|HO948043.1 0263779 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence. - 698 717 TCCTCGCCTCCACGATTTTTATCAGCGCCATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTACAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGTTAA 598 728 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 HO962350|HO962350.1 0270760 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence. - 398 417 TCCTGGCCTCTACGATTTTTATCAGCGCGATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTACAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTGAACGTTTAAGAATCTGGATCATGTCAAAGACTATCTCCCAGATTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTGCTCAGGAAGTATAGCTTGT 298 517 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 CZ692843|CZ692843.1 pN167 Brassica napus pIJ2925 library Brassica napus var. napus genomic clone pN167, genomic survey sequence. - 1048 1067 GTCACCTTGAGTAGATGTGTAATGTTATATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAACCTCTGCAAGTACAGTGGTTAAGGTTTAACAATCTGGATCATGTCAGAAAATATCTCGGATTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTGTA 948 1167 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 JJ750588|JJ750588.1 SIL-017B12TR Sisymbrium irio BAC library SIL Sisymbrium irio genomic clone SIL-017B12, genomic survey sequence. - 88 107 TGTAATTTTGTTATCTTTATTTGTAGGTGGCGTAGGGATAGCAAACATGATCGGCAGCATCCAACGGCACGAGTACATGGGCTTCGAAAACCTCTGCAAGTACAGTGGTTAAAGTTACGGTTCTTTGCTCATGTCAAATACATTATCTGGGACCTATTTTTTTTGTTTTTTTTTTACTGAAGCCAAATCGTCTGTACTCAGTAAGTA 1 207 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 FJ789640|FJ789640.1 Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 878 unordered pieces. - 1366102 1366121 TCACCTTGAGTAGATGTGTAATGTTATATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGTTTAACAATATGGATCATGTCAGAAAATATCTCGGATTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAAGTATAGCTTGT 1366002 1366221 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 CP123881|CP123881.1 Brassica napus cultivar Xiang5A chromosome 6. - 60193208 60193227 TTGAGTAGATGTGTAATGTTATACAGTATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAAGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGTTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTG 60193108 60193327 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 CP123889|CP123889.1 Brassica napus cultivar Xiang5A chromosome 14. - 20572271 20572290 TCACCTTGAGTAGATGTGTAATGTTATATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTACAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGATTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAAGTATAGCT 20572171 20572390 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 DQ062725|DQ062725.1 Brassica napus unknown mRNA. - 1023 1042 TCCTCGCCTCCACGATTTTTATCAGCGCCATATCACTTGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTACAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAA 923 1047 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 HG994358|HG994358.1 Brassica napus genome assembly, chromosome: A04. - 15004801 15004820 TCACCTTGAGTAGATGTGTAATGTTATATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTACAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGATTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAAGTATAGCT 15004701 15004920 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 HG994368|HG994368.1 Brassica napus genome assembly, chromosome: C04. - 54446938 54446957 TTGAGTAGATGTGTAATGTTATACAGTATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAAGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGTTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTG 54446838 54447057 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 LR031576|LR031576.1 Brassica rapa genome, scaffold: A04. - 13913980 13913999 TCACCTTGAGTAGATGTGTAATGTTATATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGTTTAACAATATGGATCATGTCAGAAAATATCTCGGATTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAAGTATAGCTTGT 13913880 13914099 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 LR031873|LR031873.1 Brassica oleracea HDEM genome, scaffold: C4. - 53742886 53742905 TTGAGTAGATGTGTAATGTTATACAGTATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAAGTTTAACAATCTGGATAATGTCAAAGAAAATATCTCGGTTTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAGTATAGCTTG 53742786 53743005 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 LS974620|LS974620.2 Brassica rapa genome assembly, chromosome: A04. - 14166779 14166798 TCACCTTGAGTAGATGTGTAATGTTATATTTGTTATTAGGTGGCGTGGGAATAGTGAACATGATGGGCAAGTTGCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAAGGTTTAACAATATGGATCATGTCAGAAAATATCTCGGATTTTTACCTATTTTTAACTGAAGCCAAGTCGTCTCTACTCAGTAAAGTATAGCTTGT 14166679 14166898 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0 OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. - 38291389 38291408 GTAGATGTGTAAATTTTGTAATGTTATATTTGTTATTAGGTGGCGTGGGGATAGTGAACATGATGGGCAAGCTCCAACGGCACGAGTACATGGGTTTTGAAAACCTCTGCAAGTACAGTGGTTAACGTTTAAGAATTTGGATCATGTCAAAGAAGATATTTCCCGGATGTTGACCTATTTTAACTGAACTGAAACTCAGCAAGTATAGCTTGTGAAAGTT 38291289 38291508 AAACCTCTGCAAGTACAGTG AAACCTCTGCAAGTACAGTG |||||||||||||||||||| ==================== 20 0 0 0