# [ GGGenome | 2025-04-05 06:44:50 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CCAAACAGGACCCAAGACAA # count: 24 # query: TTGTCTTGGGTCCTGTTTGG # count: 17 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins DE213457|DE213457.1 Trifolium pratense DNA, clone:RCG01686. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE213903|DE213903.1 Trifolium pratense DNA, clone:RCG02242. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATGGGTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214050|DE214050.1 Trifolium pratense DNA, clone:RCG02425. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAGTGGTTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214371|DE214371.1 Trifolium pratense DNA, clone:RCG02835. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214434|DE214434.1 Trifolium pratense DNA, clone:RCG02916. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214671|DE214671.1 Trifolium pratense DNA, clone:RCG03210. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214702|DE214702.1 Trifolium pratense DNA, clone:RCG03245. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214712|DE214712.1 Trifolium pratense DNA, clone:RCG03255. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214906|DE214906.1 Trifolium pratense DNA, clone:RCG03491. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214921|DE214921.1 Trifolium pratense DNA, clone:RCG03518. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE214997|DE214997.1 Trifolium pratense DNA, clone:RCG03611. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE215158|DE215158.1 Trifolium pratense DNA, clone:RCG03790. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE215529|DE215529.1 Trifolium pratense DNA, clone:RCG04236. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE215605|DE215605.1 Trifolium pratense DNA, clone:RCG04329. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTNGAGGNNAAACTTNTNNCACAGNGGGCCANAANATTTAAACCAANCCTTTTTCCTTTT 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE215763|DE215763.1 Trifolium pratense DNA, clone:RCG04533. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE215771|DE215771.1 Trifolium pratense DNA, clone:RCG04541. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE246697|DE246697.1 Trifolium pratense DNA, clone:RCG01048. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE246702|DE246702.1 Trifolium pratense DNA, clone:RCG01053. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 DE246722|DE246722.1 Trifolium pratense DNA, clone:RCG01079. + 1 20 CCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 1 120 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 CP125846|CP125846.1 Trifolium repens isolate ACLI19 chromosome 06_0cc. + 51001187 51001206 GCTCTCTACGATAGCCTATGCAAACAACTTATATCCTACATAAAAACAATTCAATGATAAGCACATATATATACTATAAACACTTAATTAAATTGTTAATCCAAACAGGACCCAAGACAAAAACACCAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTCTCCAACCC 51001087 51001306 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 CP125847|CP125847.1 Trifolium repens isolate ACLI19 chromosome 06_Pall. + 51234670 51234689 ATAAGCTCTCTACGATATCCTATGCAAACAACTTATAGCCTACATAAAAACAATTCAATGATAAGCAGATATCCTATAAACGCTTAATTAAATTGTTAATCCAAACAGGACCCAAGACAAAAACACCAACAACAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTCTCCAA 51234570 51234789 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 OX940789|OX940789.1 Trifolium fragiferum genome assembly, chromosome: 1. + 74044132 74044151 AGCTCTCTACGATAGCTTATGAAAACAGCTTATAGCCTACATAAAAATAATTCAATGTTAAGCACATACTATAATATAGACACTTAATTAAATTGTTTATCCAAACAGGACCCAAGACAAAAACACCAAAAGTAACAATAATTAACCAACCAGTAAAAAACTGAGGAAACTTCACAGGCAAAATAACAGCTTCTTGCAAAGCCTGTTTAGCACTTTCCAA 74044032 74044251 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 OY737502|OY737502.1 Hordeum bulbosum genome assembly, chromosome: 7H_2. + 391397876 391397895 TGCTGCTGCTGAGTGATACGGACGCAACAAGTTTGGGACGTCAACGGATCTTTCTCGCTTTCACCACTAGCTCAAACTAGCTCCAGCCCATGGAATGAACCCAAACAGGACCCAAGACAAGGATATAGTACAACTACCGTTAGTGTAACGGTACCGGGCTTAAGCTCACTTCACTGTCCCGAGAACCAAGTTACGCAGCAGAGGAAAAGCCAAGGTGGAT 391397776 391397995 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 OY856410|OY856410.1 Alisma plantago-aquatica genome assembly, chromosome: 2. + 271991805 271991824 GAATTACAAAACAGACAGCTGCATCATAGTACATCCTACCAAATAAAAACTAAATTGGAAAATGATACATTTTAACTCTGATTTTTAATCATGCACCCTACCAAACAGGACCCAAGACAAGAATCTTTGGAGATGTGAGCATACCAACCAAATTCTAGATTAAAAACTAACCCTATATAATCACTTCCTTTTTGTGTCAATCAAAAAGTACATTTTGTGT 271991705 271991924 CCAAACAGGACCCAAGACAA CCAAACAGGACCCAAGACAA |||||||||||||||||||| ==================== 20 0 0 0 OX463224|OX463224.1 Sylvilagus floridanus genome assembly, chromosome: 2. - 13891164 13891183 CCATCCAAAATGTTCAGATCTGCAAGGCGTCATTGACTAGGGCAGGTCAGATGGTGCTCTGAGACGAAGATTTCCTGCACACCTGAGCACGTAGGAAGCTTTGTCTTGGGTCCTGTTTGGAACTCTGACTGCTCCTTTGCTCTCGCTTCTCTGTATGCTGGTTAGAACTGAGCCAAAACACCAAGGACAAGGGGGCACTCATGGAACAAATCCGGTGGCT 13891064 13891283 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 LR722980|LR722980.1 Thalassophryne amazonica genome assembly, chromosome: 15. - 22101900 22101919 CTCTTTAAAGGACTATCTTTTCACTGCTGCTGTTACAGTCAGGGCATGCTTGGGAGCATGCCGTGGTACTACATATTGTCTCATCCACCACATTTCGGTATTGTCTTGGGTCCTGTTTGGTAACCACCCAGGCGCATCACCTGTCCGTCCCCACCTCCTGAAACTAACCGTCTAGCTGCTGTAGACAGGTGATACGTGGGCGACAACTTGGCCTTTTCCA 22101800 22102019 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE213531|DE213531.1 Trifolium pratense DNA, clone:RCG01780. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE213552|DE213552.1 Trifolium pratense DNA, clone:RCG01806. - 326 345 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 226 345 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE213694|DE213694.1 Trifolium pratense DNA, clone:RCG01975. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE213743|DE213743.1 Trifolium pratense DNA, clone:RCG02035. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE213848|DE213848.1 Trifolium pratense DNA, clone:RCG02168. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE213913|DE213913.1 Trifolium pratense DNA, clone:RCG02254. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE214268|DE214268.1 Trifolium pratense DNA, clone:RCG02709. - 268 287 TTGGAAAGTGCTAAACAGACTTTGCAAGAAGCTGTTATTTTGCCTATGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE214817|DE214817.1 Trifolium pratense DNA, clone:RCG03382. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE215061|DE215061.1 Trifolium pratense DNA, clone:RCG03679. - 338 357 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 238 357 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE215087|DE215087.1 Trifolium pratense DNA, clone:RCG03711. - 268 287 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE215324|DE215324.1 Trifolium pratense DNA, clone:RCG03992. - 268 287 TTCGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 168 287 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 DE215438|DE215438.1 Trifolium pratense DNA, clone:RCG04133. - 368 387 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGG 268 387 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 AP010232|AP010232.1 Lotus japonicus genomic DNA, clone: LjT03L06, TM1622. - 16071 16090 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGGTTAAAATCCATAGTAGAAAAAGACTTGCGAATTAGGCCAAATTCATTGCCTTCGTTGCGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 15971 16190 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 AP010627|AP010627.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT43J12, TM1621. - 31393 31412 TTGGAAAGTGCTAAACAGGCTTTGCAAGAAGCTGTTATTTTGCCTGTGAAGTTTCCTCAGTTTTTTACTGGTTGGTTAATTATTGTTGTTGTTGGTGTTTTTGTCTTGGGTCCTGTTTGGCGTTGGAGTTGCTCTTAGGAGCTTAGTAACTATGTTTAATTAATTTTTTTTGGTGAAATGTGTGATTGTGAATTAGGCATGTTTGGTAAAAAAAATTTGT 31293 31512 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0 OU343223|OU343223.1 Chrysanthemum makinoi genome assembly, chromosome: 7. - 107844003 107844022 AGTAAAATTAATTACGGGCTACCATTAATATAATCATCCTCATATTATTTCTAATTGGTTGTATCATAAGATATTTCACTCTCATTATCGTCCCCTTATCTTGTCTTGGGTCCTGTTTGGTTTTGGTTTTCTTAATTTTACCTTCAACTATCTCATTTGACCAAAAAAAGAGAGAGAAATCAGCCACCTTGTTCATGAGTGCTATAAAGATCAAAGCTAG 107843903 107844122 TTGTCTTGGGTCCTGTTTGG TTGTCTTGGGTCCTGTTTGG |||||||||||||||||||| ==================== 20 0 0 0