# [ GGGenome | 2025-04-05 09:16:21 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CCAGTAATCCTCGCCATCAT # count: 26 # query: ATGATGGCGAGGATTACTGG # count: 33 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CB290207|CB290207.1 UCRCS01_01aa10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa10, mRNA sequence. + 397 416 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGGGATGTGTTTGTAAACCCCAAATTTGTAGTGAGCAAAATCCTCATA 297 516 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CB291108|CB291108.1 UCRCS01_02be08_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02be08, mRNA sequence. + 418 437 CACCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGAAACCATCCCCACCCCAGCTTCTATTCCACTGATTAGCGAAAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCCCCTGGGATGGGTTTGTAAACCCCAAATTTGTAGGGAGCAAAATCCTCATA 318 537 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CB292488|CB292488.1 UCRCS01_04cd07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04cd07, mRNA sequence. + 226 245 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 126 345 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CB292794|CB292794.1 UCRCS01_05ac07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ac07, mRNA sequence. + 314 333 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGGGATGGGTTTGTAAACCCCAAATTTGTAGGGAGCAAAATCCTCATA 214 433 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CF828171|CF828171.1 UCRCR01_01C19_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01C19, mRNA sequence. + 382 401 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 282 501 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CF828173|CF828173.1 UCRCR01_01C20_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01C20, mRNA sequence. + 382 401 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 282 501 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CF828248|CF828248.1 UCRCR01_01E19_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01E19, mRNA sequence. + 382 401 CAGGAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTGTTAATCTTGAAGTAACCATCCGCACCCCATCTTCTATTCCACTGATTATCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGGATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 282 501 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CF829642|CF829642.1 UCRCR01_03H23_f Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa03H23, mRNA sequence. + 395 414 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 295 514 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CF831126|CF831126.1 UCRCR01_05N10_f Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa05N10, mRNA sequence. + 304 323 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 204 423 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CF833118|CF833118.1 UCRCS02_03A21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A21, mRNA sequence. + 419 438 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCAAGGAACCGAACGACGCCGTCGTTTACATCTTCATTTACGTCGTCAACGACAGCAACTCA 319 538 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CN181493|CN181493.1 UCRCS04_0001A12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A12, mRNA sequence. + 353 372 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 253 472 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CN181779|CN181779.1 UCRCS04_0001H12_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H12, mRNA sequence. + 417 436 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 317 536 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CN182417|CN182417.1 UCRCS04_0002G19_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002G19, mRNA sequence. + 419 438 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 319 538 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CN189681|CN189681.1 UCRCS06_0002E03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E03, mRNA sequence. + 419 438 CAACAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAACGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGGGAAGGGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 319 538 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CV709624|CV709624.1 UCRPT01_0013C10_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0013C10, mRNA sequence. + 390 409 CAGCAACCACGTCCTCTTCAAGACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCTCCCATTACACCACCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 290 509 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CV714871|CV714871.1 UCRCS08_0004O23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0004O23, mRNA sequence. + 302 321 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 202 421 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CV885078|CV885078.1 UCRCS04_2_012D12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D12, mRNA sequence. + 302 321 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 202 421 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CV886259|CV886259.1 UCRCS04_2_022A06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_022_T7_A06, mRNA sequence. + 383 402 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 283 502 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CX642329|CX642329.1 UCRPT02_59E09_b Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-59E09-I18-1-6.b, mRNA sequence. + 314 333 CAGCAACCACGTCCTCTTCAAGACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCTCCCATTACACCACCTGTGATGTGTTTGTAGACCCCAAATTTGTAGTGAGCAAAATCCTCATA 214 433 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 CX667393|CX667393.1 UCRCP01_030_H10_T7 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_030_T7_H10, mRNA sequence. + 406 425 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 306 525 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 DN620240|DN620240.1 UCRCS11_05A15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005A15, mRNA sequence. + 531 550 ATCTGTAACAGAGAGAAGGTATATTATCTCGTACATGATCTCAATAAGTTATATAGTCATTACTATAAAAGTTGTTCGAGTAGAGAAATTGTCAACATACCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTGTAA 431 650 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 DN621308|DN621308.1 UCRCS11_06I15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006I15, mRNA sequence. + 339 358 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 239 458 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 DN624164|DN624164.1 UCRCA01_04J15_f Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0004J15, mRNA sequence. + 426 445 CAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATA 326 545 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 EB685053|EB685053.1 CP-20_H10_089.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-20_H10_089 3', mRNA sequence. + 415 434 CAGCAACCACGTCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCTCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATTTGTAGTGAGCGAAATCCTCATA 315 534 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 EB687477|EB687477.1 CP49_F03_027.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP49_F03_027 3', mRNA sequence. + 408 427 CAGCAACCACGTCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATGACCTCCCATTACATCGCCTGTGATGTGTTTGTAGACCCC 308 500 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 OX327684|OX327684.1 Ailanthus altissima genome assembly, chromosome: 2. + 31970711 31970730 AGCTGAAACAGAGAGAAAGTACATGATCAAGATATCATCTCAACTAGTTACATGATTGTAAAATCTAAAAATTCACAATTAGACAAAATTGTCAGCATACCCAGTAATCCTCGCCATCATCACTAGTCCCCCAACCAATGAGCTTAACAGCATGACCTCCCATTACATCACCAGTTATGTGCTTGTAAACCCCGGACTTGTAATGGGCAAAATCCTGTAA 31970611 31970830 CCAGTAATCCTCGCCATCAT CCAGTAATCCTCGCCATCAT |||||||||||||||||||| ==================== 20 0 0 0 BQ623362|BQ623362.1 USDA-FP_00453 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00453 5', mRNA sequence. - 483 502 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGGTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAA 383 586 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CF506243|CF506243.1 USDA-FP_121000-741 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-40_G12 5', mRNA sequence. - 278 297 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCA 178 311 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CF828170|CF828170.1 UCRCR01_01C19_f Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01C19, mRNA sequence. - 643 662 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 543 762 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CF828172|CF828172.1 UCRCR01_01C20_f Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01C20, mRNA sequence. - 644 663 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 544 763 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CK665478|CK665478.1 USDA-FP_3953 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE19C12 5', mRNA sequence. - 174 193 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 74 293 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CK740102|CK740102.1 USDA-FP_6596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E01 5', mRNA sequence. - 122 141 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 22 241 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CK938768|CK938768.1 CGF1004438_E07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_E07 5', mRNA sequence. - 651 670 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 551 770 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CX289566|CX289566.1 C02014G03SK IF1 Citrus clementina cDNA clone C02014G03, mRNA sequence. - 363 382 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGA 263 471 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CX299328|CX299328.1 C06021C10SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06021C10, mRNA sequence. - 362 381 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 262 481 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CX642330|CX642330.1 UCRPT02_59E09_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-59E09-I18-1-5.g, mRNA sequence. - 573 592 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGTGGTGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAGATGAGTGTGGTCTTGAAGAGGACGTGGTTGCTG 473 692 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 CX667392|CX667392.1 UCRCP01_030_H10_T3 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_030_T3_H10, mRNA sequence. - 723 742 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTTAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 623 842 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 DC899561|DC899561.1 Citrus unshiu mRNA, clone: STG2_0787, 5'-end sequence, expressed in style. - 190 209 TATGAGGATTTCGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 90 309 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 DN798255|DN798255.1 USDA-FP/ARO_13123 Star Ruby grapefruit temperature-conditioned flavedo cDNA Citrus x paradisi cDNA clone Cond-33_C11 5', mRNA sequence. - 638 657 TATGAGGATTTCGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGACGTGGTTGCTG 538 757 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 DN959618|DN959618.1 USDA-FP/ARO_15448 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-26_E04 5', mRNA sequence. - 412 431 TATGAGGATTTCGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGACGTGGTTGCTG 312 531 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 DN959857|DN959857.1 USDA-FP/ARO_15687 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-30_D06 5', mRNA sequence. - 329 348 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 229 448 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EX447549|EX447549.1 Volcani_7_09_G6 Volcani07 Citrus reticulata x Citrus temple cDNA, mRNA sequence. - 632 651 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 532 751 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY660466|EY660466.1 CS00-C1-101-022-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. - 101 120 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 1 220 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY660680|EY660680.1 CS00-C1-101-024-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. - 115 134 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 15 234 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY703652|EY703652.1 CS00-C3-701-023-C03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence. - 874 893 CAGTTATGAGGGATTTGCTCACTACAAATCTGGGTCTACAACACTCACANGCGATGTAATGGGGGGTCATGCTNGTAAGCTNATGGNTGGGGAACTANTGATGATGGCGAGGATTACTGGGATCCTCCTATANTGGAATNAAACTGGGTGCGGAT 774 928 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY704337|EY704337.1 CS00-C3-701-031-G04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence. - 369 388 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 269 488 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY714105|EY714105.1 CS00-C3-702-038-E07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence. - 548 567 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 448 667 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY779598|EY779598.1 CR05-C1-103-053-C12-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence. - 524 543 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACCTCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATCCTCGCTAATCATGGGAATAGAAGCTGGGGTGCGGATGGGTACTTCAAAATTAAAAAAAGATCCAATGAGTGGTGTATTGAAAAAGGAAGGGGTTGTT 424 643 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY821281|EY821281.1 PT11-C1-901-028-E05-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, mRNA sequence. - 492 511 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGTGGTGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAGTCAATGGAATAAAAACTGGGGTGCGGATGGGTACCTTAACAATAAAAGAGCATGAAGGGAGTGGGCCCTCAAGAACACGGAGTTAAAGA 392 611 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY835206|EY835206.1 PT11-C2-301-020-E03-CT.F Poncirus trifoliata bark, infected with Phytophthora parasitica Citrus trifoliata cDNA, mRNA sequence. - 57 76 CACAGGTGGTGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTCTTGAAGAGGACGTGGTTGCTG 1 176 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY860667|EY860667.1 CM30-C1-401-012-B10-CT.F Sweet lime leaf, infected with CiLV Citrus limettioides cDNA, mRNA sequence. - 379 398 TATGAGGATTTCGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCGTTGGAATAAAAGCTGGGGTGCCGATGGTTACTTTCAAAATTAAAAAAGGATCAAATGATTGTGGGTATTGAAAAGGAACGGGGTTG 279 498 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY860807|EY860807.1 CM30-C1-401-018-H09-CT.F Sweet lime leaf, infected with CiLV Citrus limettioides cDNA, mRNA sequence. - 423 442 ATGAGGATTTCGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGGCGATGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTTCAGATTAAAAGAGGATCAAATGATTGTGGTATTGAAAGAGGACGTGGTTGCT 323 542 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY889019|EY889019.1 TS27-C2-300-027-G07-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence. - 134 153 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 34 253 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 EY889557|EY889557.1 TS27-C2-300-031-E02-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence. - 135 154 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 35 254 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 FC877722|FC877722.1 C31605C10EF HSVdMacro1 Citrus macrophylla cDNA clone C31605C10, mRNA sequence. - 590 609 TATGAGGATTTCACTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGAGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTTGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACCTTCAGATTAAAGAGGATCAATGAGTGTGGTATTGA 490 690 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 FC921718|FC921718.1 C32108E07EF RVDevelopN Citrus clementina cDNA clone C32108E07, mRNA sequence. - 180 199 TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTG 80 299 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 JZ120149|JZ120149.1 CVSOVPREAN629 Library from pre anthesis stages of ovules of polyembryonic Citrus sinensis Citrus sinensis cDNA, mRNA sequence. - 841 860 ATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTGAAAAAGAATGTGGTTTG 741 960 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 OY754318|OY754318.1 Citrus sinensis genome assembly, chromosome: 1. - 21651315 21651334 TTACAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGGTATGTTGACAATTTCTCTACTCGAACAACTTTTATAGTAATGACTATATAACTTATTGAGATCATGTACGAGATAATATACCTTCTCTCTGTTACAGAT 21651215 21651434 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0 OZ010576|OZ010576.1 Sepia lycidas genome assembly, chromosome: 6. - 41738062 41738081 TTTTCAATCTTTCTTAATCTATTTTAGATGAACCGACTTAATTATTAAGAAGTTGAAAACAATAGTTACAATGTAGGAGGAAAATTAAGTCATGTCTTGAATGATGGCGAGGATTACTGGCCAAAAATATAAATTATTGTTACGTTGTAAACGCTGTCGTGAAATGCATTTGATCTGATTTCTTGTCACAAGAAGATTGGAATTGTGACTCAATAATATT 41737962 41738181 ATGATGGCGAGGATTACTGG ATGATGGCGAGGATTACTGG |||||||||||||||||||| ==================== 20 0 0 0