# [ GGGenome | 2025-04-07 02:35:20 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CCCACAATCTAGGAAACCCTG # count: 11 # query: CAGGGTTTCCTAGATTGTGGG # count: 13 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins EX060638|EX060638.1 BR045282 salt-treated whole plant cDNA library KBLS Brassica rapa subsp. pekinensis cDNA clone KBLS-080F07 5', mRNA sequence. + 1 21 CCCACAATCTAGGAAACCCTGTTTGAAATTCAATTCAATTCAATTCAATTCATCCATCTTTTTTTTTCTTTCTTTTTGCCGTGTGGTTGATTTTTCCCGGGAAAATTGGTATATCATCTGT 1 121 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 EX079228|EX079228.1 BR063872 silique cDNA library KBSP Brassica rapa subsp. pekinensis cDNA clone KBSP-028G07 5', mRNA sequence. + 87 107 CTTCTTTCACTTTTAGGTAGTAGGAATTAATTAAAGAGAGAGAGAGAAATATCTGCAGAGAGTCATTAAGAGGTTCTAACGAATTACCCACAATCTAGGAAACCCTGTTTGAAATTCAATTCAATTCAATTCAATTCATCCATCTTTTTTTTTCTTTCTTTTTGCCGTGTGGTTGATTTTTCCCGGGAAAATTGGTATATCATCTGT 1 207 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 EX080567|EX080567.1 BR065211 silique cDNA library KBSP Brassica rapa subsp. pekinensis cDNA clone KBSP-047E11 5', mRNA sequence. + 87 107 CTTCTTTCACTTTTAGGTAGTAGGAATTAATTAAAGAGAGAGAGAGAAATATCTGCAGAGAGTCATTAAGAGGTTCTAACGAATTACCCACAATCTAGGAAACCCTGTTTGAAATTCAATTCAATTCAATTCAATTCATCCATCTTTTTTTTTCTTTCTTTTTGCCGTGTGGTTGATTTTTCCCGGGAAAATTGGTATATCATCTGT 1 207 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 FD971059|FD971059.1 RR2GA24TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. + 121 141 CAGAGTCTTCTTTCAACTTTTAGGCAGTAGGAATTAATTGAAGTGAGAGAGAGAAATTTGCACAGAGGGTGGTATATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTCAATTCATTCATCTTTCTTTTTTTTTAAATCTTTTGCATTGTGGTTGATTTCTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGGT 21 241 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 FY429527|FY429527.1 Raphanus sativus mRNA, clone: RSCF06M12, 5' end sequence. + 94 114 GACTTTAGGTTGTAGGAATTAATTGAAGTGATAGAGAGAGAGAGAGAGAGAAATTTGCACAGAGTTATATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTGAATTCATTCATCTTTCTTTTTTTTTAAAAAATCTTTTGCATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGG 1 214 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 FY448354|FY448354.1 Raphanus sativus mRNA, clone: RSCS07E11, 5' end sequence. + 104 124 TCTTTTGACTTTTAGGTTGTAGGAATTAATTGAAGTGATAGAGAGAGAGAGAGAGAGAAATTTGCACAGAGTTATATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTGAATTCATTCATCTTTCTTTTTTTTTAAAAAATCTTTTGCATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGG 4 224 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 FY449771|FY449771.1 Raphanus sativus mRNA, clone: RSCS11F04, 5' end sequence. + 42 62 ATTTGCACAGAGTTATATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTGAATTCATTCATCTTTCTTTTTTTTTAAAAATCTTTTGCATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGGT 1 162 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 FY454617|FY454617.1 Raphanus sativus mRNA, clone: RSCS24O02, 5' end sequence. + 78 98 GATTAATTGAAGTGATAGAGAGAGAGAGAGAGAGAAATTTGCACAGAGTTATATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTGAATTCATTCATCTTTCTTTTTTTTTAAAAAATCTTTTGCATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGG 1 198 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 AC255149|AC255149.1 Raphanus sativus cultivar WK10039 clone RsH043B06, *** SEQUENCING IN PROGRESS ***, 23 unordered pieces. + 70447 70467 CTTTTGAACTTTTAGGTTGTAGGAATTAATTGAAGTGATAGAGAGAGAGAGAGAGAGAAATTTGCACAGAGTTATATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTGAATTCATTCATCTTTCTTTTTTTTTAAAAAATCTTTTGCATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGG 70347 70567 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 AC189360|AC189360.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB045B23, complete sequence. + 9896 9916 GAAAAAAAACAGTCTTCTTTCAACTTTTAGGTAGTAGGAATTAATTAAAGAGAGAGAGAGAAATATTTGCAGAGAGTCATTAAGAGGTTCTAACGAATTACCCACAATCTAGGAAACCCTGTTTGAAATTCAATTCAATTCAATTCAATTCATCCATCTTTTTTTTTCTTTCTTTTTGCCGTGTGGTTGATTTTTCCCGGGAAAATTGGTATATCATCTGT 9796 10016 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. + 3742369 3742389 TCTTTTGAACTTTTAGGTTGTAGGAATTAATTGAAGTGATAGAGAGAGAGAGAGAAATTTGCACAGAGTTATACTATCATTAAGAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTCAATTCATTCATCTTTCTTTTTTTTTTTAAATCTTTTGCATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGGT 3742269 3742489 CCCACAATCTAGGAAACCCTG CCCACAATCTAGGAAACCCTG ||||||||||||||||||||| ===================== 21 0 0 0 FX667952|FX667952.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_14459. - 1683 1703 ACCGCAGGAAACTGATGATTCACCAATTTTCCCGGGAAAAAATCAACCACAATGCAAAAGATTTAAAAAAAAAAAGAAAGATGAATGAATTGAATTCAATCAGGGTTTCCTAGATTGTGGGTAATTCGTTACAACCTCTTAATGATAGTATAACTCTGTGCAAATTTCTCTCTCTCTCTCTATCACTTCAATTAATTCCTACAACCTAAAAGTTCAAAAGA 1583 1803 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 FX698877|FX698877.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_4845. - 1735 1755 ACAGATGATATACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGAAAAAAAAAGATGGATGAATTGAATTGAATTGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTCTGCAAATATTTCTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTC 1635 1855 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 FX733158|FX733158.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_31465. - 1734 1754 ACTTTTAGCTACCGCAGGAAACAGATGATACACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGATGAATGAATTGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTGTGCAAATATTTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTTCT 1634 1854 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 FX739331|FX739331.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_16975. - 1672 1692 ACCGCAGGAAACTGATGATTCACCAATTTTCCCGGGAAAAAATCAACCACAATGCAAAAGATTTAAAAAAAAAAAGAAAGATGAATGAATTGAATTCAATCAGGGTTTCCTAGATTGTGGGTAATTCGTTACAACCTCTTAATGATAGTATAACTCTGTGCAAATTTCTCTCTCTCTCTCTATCACTTCAATTAATTCCTACAACCTAAAAGTTCAAAAGA 1572 1792 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 JT793529|JT793529.1 TSA: Raphanus sativus RS08982 mRNA sequence. - 1772 1792 CCGCAGGAAACTGATGATTCACCAATTTTCCCGGGAAAAAATCAACCACAATGCAAAAGATTTTTTAAAAAAAAAGAAAGATGAATGAATTCAATTCAATCAGGGTTTCCTAGATTGTGGGTAATTCGTTACAACCTCTTAATGATATAACTCTGTGCAAATTTCTCTCTCTCTCTCTCTCTCTATCACTTCAATTAATTCCTACAACCTAAAAGTTCAAA 1672 1892 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 JT793530|JT793530.1 TSA: Raphanus sativus RS08983 mRNA sequence. - 1702 1722 CCGCAGGAAACTGATGATTCACCAATTTTCCCGGGAAAAAATCAACCACAATGCAAAAGATTTTTTAAAAAAAAAGAAAGATGAATGAATTCAATTCAATCAGGGTTTCCTAGATTGTGGGTAATTCGTTACAACCTCTTAATGATATAACTCTGTGCAAATTTCTCTCTCTCTCTCTCTCTCTATCACTTCAATTAATTCCTACAACCTAAAAGTTCAAA 1602 1822 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 JT793531|JT793531.1 TSA: Raphanus sativus RS08984 mRNA sequence. - 1101 1121 CCGCAGGAAACTGATGATTCACCAATTTTCCCGGGAAAAAATCAACCACAATGCAAAAGATTTTTTAAAAAAAAAGAAAGATGAATGAATTCAATTCAATCAGGGTTTCCTAGATTGTGGGTAATTCGTTACAACCTCTTAATGATATAACTCTGTGCAAATTTCTCTCTCTCTCTCTCTCTCTATCACTTCAATTAATTCCTACAACCTAAAAGTTCAAA 1001 1221 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 AC189300|AC189300.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB028P01, complete sequence. - 14678 14698 ACAGATGATATACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGAAAAAAAAAGATGGATGAATTGAATTGAATTGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTCTGCAAATATTTCTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTC 14578 14798 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 CP123878|CP123878.1 Brassica napus cultivar Xiang5A chromosome 3. - 27192893 27192913 ACTTTTAGCTACCGCAGGAAACAGATGATACACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGATGAATGAATTGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTGTGCAAATATTTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTTCT 27192793 27193013 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 HG994357|HG994357.1 Brassica napus genome assembly, chromosome: A03. - 27206528 27206548 ACTTTTAGCTACCGCAGGAAACAGATGATACACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGATGAATGAATTGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTGTGCAAATATTTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTTCT 27206428 27206648 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 LR031572|LR031572.1 Brassica rapa genome, scaffold: A03. - 27095219 27095239 TTAGCTACCGCAGGAAACAGATGATACACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGAAAAAAAAAATGAATGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTGTGCAAATATTTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTCTT 27095119 27095339 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. - 49908131 49908151 ACCGCAGGAAACTGATGATTCACCAATTTTCCCGGGAAAAAATCAACCACAATGCAAAAGATTTAAAAAAAAAAAGAAAGATGAATGAATTGAATTCAATCAGGGTTTCCTAGATTGTGGGTAATTCGTTACAACCTCTTAATGATAGTATAACTCTGTGCAAATTTCTCTCTCTCTCTCTATCACTTCAATTAATTCCTACAACCTAAAAGTTCAAAAGA 49908031 49908251 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0 LS974619|LS974619.2 Brassica rapa genome assembly, chromosome: A03. - 27222373 27222393 TTAGCTACCGCAGGAAACAGATGATACACCAATTTTCCCGGGAAAAATCAACCACACGGCAAAAAGAAAGAAAAAAAAAATGAATGAATTGAATTTCAAACAGGGTTTCCTAGATTGTGGGTAATTCGTTAGAACCTCTTAATGACTCTGTGCAAATATTTCTCTCTCTCTTTAATTAATTCCTACTACCTAAAAGTTGAAAGAAGACTGTTTTTTTTCTT 27222273 27222493 CAGGGTTTCCTAGATTGTGGG CAGGGTTTCCTAGATTGTGGG ||||||||||||||||||||| ===================== 21 0 0 0