# [ GGGenome | 2025-12-17 00:19:41 ] # database: DDBJ release 138.0 (Jun, 2025) # query: CCGTGCAGACACATTTGTTCATCT # count: 10 # query: AGATGAACAAATGTGTCTGCACGG # count: 15 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FX717221|FX717221.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_9190. + 116 139 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCTCCTTTAGGCTTCTTTTCTTTTTCAGTAAGCAGAGGTTGGATGATAACGTGCATTGTGGTGACAGCACCTACGAGATTAGAGACAGGGTT 16 239 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 FX767848|FX767848.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_36544. + 201 224 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCTCCTTTAGGCTTCTTTTCTTTTTCAGTAAGCAGAGGTTGGATGATAACGTGCATTGTGGTGACAGCACCTACGAGATTAGAGACAGGGTT 101 324 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 CP123878|CP123878.1 Brassica napus cultivar Xiang5A chromosome 3. + 15212260 15212283 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCTCCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 15212160 15212383 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 CP151898|CP151898.1 Brassica napus cultivar Xiang5A chromosome 3. + 15212303 15212326 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCTCCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 15212203 15212426 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 CP151908|CP151908.1 Brassica napus cultivar Xiang5A chromosome 13. + 23658371 23658394 CTTATGATTATGTATCAGTAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCACCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 23658271 23658494 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 HG994357|HG994357.1 Brassica napus genome assembly, chromosome: A03. + 15094277 15094300 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCACCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 15094177 15094400 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 HG994367|HG994367.1 Brassica napus genome assembly, chromosome: C03. + 23641363 23641386 CTTATGATTATGTATCAGTAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCACCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 23641263 23641486 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 LR031572|LR031572.1 Brassica rapa genome, scaffold: A03. + 14843643 14843666 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCACCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 14843543 14843766 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 LR031872|LR031872.1 Brassica oleracea HDEM genome, scaffold: C3. + 23374935 23374958 CTTATGATTATTTATCAGTAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTGTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCACCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 23374835 23375058 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 LS974619|LS974619.2 Brassica rapa genome assembly, chromosome: A03. + 14969784 14969807 CTTATGATTATGTATCAGCAAACAATCTATACCAAACCACGTGAGGGAACCAGACCTGTAATCTGTCTCTCTCGAGATTACTTGCGTTTCTCTTACATGACCGTGCAGACACATTTGTTCATCTTAGGATCATCACCTTTAGGCTTCTTTTCTGTTCCAAACACAATAAAAGAAACAGTATGTCAAGCCGAGAACATATTTTGAAGCTTAAAGTAGAGGCTGTC 14969684 14969907 CCGTGCAGACACATTTGTTCATCT CCGTGCAGACACATTTGTTCATCT |||||||||||||||||||||||| ======================== 24 0 0 0 DY024944|DY024944.1 53COT2_T3_010_E09_03SEP2004_071 Brassica napus 36hr germinating seed library 53COT2 Brassica napus cDNA 5', mRNA sequence. - 364 387 AACCCCGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGTGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 264 487 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EE552486|EE552486.1 BNQA_UP_074_G09_31MAY2005_067 Brassica napus BNQA Brassica napus cDNA 5', mRNA sequence. - 390 413 AACCCCGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGTGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTGATCTCGAGAGAGACAGATTACATGTCTGGGTCCCCTCACGTGGTTGGGATAGATTGTTTGCTGATACATAATC 290 508 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EV072221|EV072221.1 BNSCS4CT_UP_179_D07_22MAY2007_057 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence. - 470 493 AACCCCGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGTGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 370 593 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX049313|EX049313.1 BR033957 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-045B01 5', mRNA sequence. - 468 491 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 368 591 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX049946|EX049946.1 BR034590 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-053C09 5', mRNA sequence. - 468 491 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 368 591 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX116549|EX116549.1 BR071248 pistil cDNA library KCOW Brassica rapa subsp. pekinensis cDNA clone KCOW-08C04 5', mRNA sequence. - 618 641 AACCCTGTCTCTAATCTCGTACGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCA 518 700 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX118566|EX118566.1 BR102396 cotyledon cDNA library KHCT Brassica rapa subsp. pekinensis cDNA clone KHCT-15E03 5', mRNA sequence. - 339 362 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 239 462 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX122889|EX122889.1 BR106719 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-14B10 5', mRNA sequence. - 358 381 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTC 258 434 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX123865|EX123865.1 BR107695 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-29D06 5', mRNA sequence. - 537 560 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 437 660 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX124175|EX124175.1 BR108005 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-34B01 5', mRNA sequence. - 537 560 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 437 660 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 EX125533|EX125533.1 BR109363 etiolated mature leaf cDNA library KHLW Brassica rapa subsp. pekinensis cDNA clone KHLW-01G12 5', mRNA sequence. - 536 559 AACCCTGTCTCTAATCTCGTAGGTGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 436 659 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 FG571072|FG571072.1 BN24DYSC_UP_003_A03_8JAN2008_031 BN24DYSC Brassica napus cDNA 5', mRNA sequence. - 117 140 AACCCTGTCTCTAATCTCGTTGGCGCTGTCACCACGATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGTGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAGGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTACTGATACATAATCATAAG 17 240 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 GR450746|GR450746.1 BNAPO1GH_T3_007_F05_14JUN2007_037 BNAPO1GH Brassica napus cDNA 5', mRNA sequence. - 440 463 AACCCTGTCTCTAATCTCGTTGGCGCTGTCACCACAATGCACGTTATCATCCAACCTCTGCTTACTGAAAAAGAAAAGAAGCCTAAAGGTGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTACTGATACATAATCATAAG 340 563 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 AC241143|AC241143.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH065D07, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces. - 112914 112937 GACAGCCTCTACTTTAAGCTTCAAAATATGTTCTCGGCTTGACATACTGTTTCTTTTATTGTGTTTGGAACAGAAAAGAAGCCTAAAGGAGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTGCTGATACATAATCATAAG 112814 113037 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0 CP123893|CP123893.1 Brassica napus cultivar Xiang5A chromosome 18. - 55545892 55545915 GACAGCCTCTACTTTAAGCTTCAAAATATGTTCTCGGCTTGACATACTGTTTCTTTTATTGTGTTTGGAACAGAAAAGAAGCCTAAAGGTGATGATCCTAAGATGAACAAATGTGTCTGCACGGTCATGTAAGAGAAACGCAAGTAATCTCGAGAGAGACAGATTACAGGTCTGGTTCCCTCACGTGGTTTGGTATAGATTGTTTACTGATACATAATCATAAG 55545792 55546015 AGATGAACAAATGTGTCTGCACGG AGATGAACAAATGTGTCTGCACGG |||||||||||||||||||||||| ======================== 24 0 0 0