# [ GGGenome | 2025-04-05 17:06:28 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CGCCAAGAACCACTCTCTTC # count: 6 # query: GAAGAGAGTGGTTCTTGGCG # count: 14 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FX700743|FX700743.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_5934. + 1143 1162 ACAGGAGCAGCCTTTCTCTGCTTCGCTCCAAGACTCTTGGTGGGTTTAACGATCTCTCTCTTCTGATTGAGATTCGTGACGTTGGAGAGATTCAGAAGCTCGCCAAGAACCACTCTCTTCCTGGTGACACGTTCCTCCTCCGTGGCCATAGCCTTTCTCTTCGCCGCCGCTCTCTTTACCCTCACGCAGATCTCTTGCTGCGTCATGTCTTAGGGATTGA 1043 1262 CGCCAAGAACCACTCTCTTC CGCCAAGAACCACTCTCTTC |||||||||||||||||||| ==================== 20 0 0 0 FX772199|FX772199.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_60454. + 232 251 ACAGGAGCAGCCTTTCTCTGCTTCGCTCCAAGACTCTTGGTGGGCTTAACGATCTCTCTCTTCTGATTGAGATTCGTGACGTTGGAGAGATTCAGAAGCTCGCCAAGAACCACTCTCTTCTTGGTGACACGTTCCTCCTCTGTGGCCATAGCCTTTCTCTTCGCCGCCGCTCTCTTTACCCTCACGCAGATCTCTT 132 327 CGCCAAGAACCACTCTCTTC CGCCAAGAACCACTCTCTTC |||||||||||||||||||| ==================== 20 0 0 0 BH669763|BH669763.1 BOHXI58TF BO_2_3_KB Brassica oleracea genomic clone BOHXI58, genomic survey sequence. + 122 141 GGAGGAGCCGCCTTTCTTTGCTTCGCTCCAAGACTCTTGGTGGGCTTGGCGACCTCTCTCTTCTGATAAAGATTCGTGACGTTGGAGAGATTCGGAAGCTCGCCAAGAACCACTCTCTTCTTGGTGACACGTTCCTCCTCCGTGGCCATAGCCTTTCTCTTCGCCGCCGCTCTCGTTACCCTCACGCAGATCTCTTGCTGCGTCATGTCTTAGAGAAGGA 22 241 CGCCAAGAACCACTCTCTTC CGCCAAGAACCACTCTCTTC |||||||||||||||||||| ==================== 20 0 0 0 HG994364|HG994364.1 Brassica napus genome assembly, chromosome: A10. + 3547425 3547444 ACAGGAGCAGCCTTTCTCTGCTTCGCTCCAAGACTCTTGGTGGGCTTAACGATCTCTCTCTTCTGATTGAGATTCGTGACGTTGGAGAGATTCAGAAGCTCGCCAAGAACCACTCTCTTCCTGGTGACACGTTCCTCCTCCGTGGCCATAGCCTTTCTCTTCGCCGCCGCTCTCTTTACCCTCACGCAGATCTCTTGCTGCGTCATGTCTTAGGGATTGA 3547325 3547544 CGCCAAGAACCACTCTCTTC CGCCAAGAACCACTCTCTTC |||||||||||||||||||| ==================== 20 0 0 0 LR031577|LR031577.1 Brassica rapa genome, scaffold: A10. + 3731411 3731430 ACAGGAGCAGCCTTTCTCTGCTTCGCTCCAAGACTCTTGGTGGGTTTAACGATCTCTCTCTTCTGATTGAGATTCGTGACGTTGGAGAGATTCAGAAGCTCGCCAAGAACCACTCTCTTCCTGGTGACACGTTCCTCCTCCGTGGCCATAGCCTTTCTCTTCGCCGCCGCTCTCTTTACCCTCACGCAGATCTCTTGCTGCGTCATGTCTTAGGGATTGA 3731311 3731530 CGCCAAGAACCACTCTCTTC CGCCAAGAACCACTCTCTTC |||||||||||||||||||| ==================== 20 0 0 0 LS974626|LS974626.2 Brassica rapa genome assembly, chromosome: A10. + 3762743 3762762 ACAGGAGCAGCCTTTCTCTGCTTCGCTCCAAGACTCTTGGTGGGTTTAACGATCTCTCTCTTCTGATTGAGATTCGTGACGTTGGAGAGATTCAGAAGCTCGCCAAGAACCACTCTCTTCCTGGTGACACGTTCCTCCTCCGTGGCCATAGCCTTTCTCTTCGCCGCCGCTCTCTTTACCCTCACGCAGATCTCTTGCTGCGTCATGTCTTAGGGATTGA 3762643 3762862 CGCCAAGAACCACTCTCTTC CGCCAAGAACCACTCTCTTC |||||||||||||||||||| ==================== 20 0 0 0 DK493553|DK493553.1 Brassica oleracea var. viridis mRNA, clone: KALE-099F20, 5' end sequence. - 145 164 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 45 264 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 DK511700|DK511700.1 Brassica oleracea var. viridis mRNA, clone: KALE-146N18, 5' end sequence. - 181 200 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 81 300 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EE454919|EE454919.1 BNBS4DCT_UP_020_D02_25MAR2005_010 Brassica napus seeds BNBS4DCT Brassica napus cDNA 5', mRNA sequence. - 140 159 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 40 259 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EL625737|EL625737.1 EST3243 3-9 DAP Brassica Napus seed cDNA library Brassica napus cDNA clone B140B091, mRNA sequence. - 185 204 ATTCCTCTCTAAGACTGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 85 304 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EV117248|EV117248.1 0122560 Brassica napus Root library Brassica napus cDNA, mRNA sequence. - 184 203 TGCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 84 303 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EX051935|EX051935.1 BR036579 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-080B06 5', mRNA sequence. - 116 135 TTCATCCCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAAAGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAGGAAGAGAGTGGTTCTTGGCGAGCTTCTGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGATCGTTAAACCCACCAAGAGTCTTGGAGCGAAGCAGAGAAAGGCTGCTCCTGT 16 235 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EX099243|EX099243.1 BR085533 root cDNA library KFRT Brassica rapa subsp. pekinensis cDNA clone KFRT-015E10 5', mRNA sequence. - 388 407 TCAATCCCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAAAGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAGGAAGAGAGTGGTTCTTGGCGAGCTTCTGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGATCGTTAAACCCACCAAGAGTCTTGGAGCGAAGCAGAGAAAGGCTGCTCCTGT 288 507 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EX897369|EX897369.1 RS2CT88TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 144 163 TCAATCCCTAAATCATGACGAAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAAGCTATGGCCACGGAGGAGGAACGCGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTGTCCAACGTCGCGAATCTCAATCAGAAGAGAGAGATCGCCAAGCCAGCGAAACTGAGAAAGAGAGCTCCGGTGGCTTTGGCTTCCGT 44 263 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 EY913661|EY913661.1 RR3D954TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 144 163 TCAATCCCTAAATCATGACGAAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAAGCTATGGCCACGGAGGAGGAACGCGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTGTCCAACGTCGCGAATCTCAATCAGAAGAGAGAGATCGCCAAGCCAGCGAAGCTGAGAAAGAGAGCTCCGGTGGCTTTGGCTTCCGT 44 263 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 BH738891|BH738891.1 BOMIK07TF BO_2_3_KB Brassica oleracea genomic clone BOMIK07, genomic survey sequence. - 237 256 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTTTATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTCCTCC 137 356 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 CP123880|CP123880.1 Brassica napus cultivar Xiang5A chromosome 5. - 23002946 23002965 TCAATCCCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAAAGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAGGAAGAGAGTGGTTCTTGGCGAGCTTCTGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGATCGTTAAGCCCACCAAGAGTCTTGGAGCGAAGCAGAGAAAGGCTGCTCCTGT 23002846 23003065 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 CP123887|CP123887.1 Brassica napus cultivar Xiang5A chromosome 12. - 5620809 5620828 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 5620709 5620928 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 HG994370|HG994370.1 Brassica napus genome assembly, chromosome: C06. - 5055787 5055806 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 5055687 5055906 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0 LR031880|LR031880.1 Brassica oleracea HDEM genome, scaffold: C6. - 1954157 1954176 TCCTTCTCTAAGACATGACGCAGCAAGAGATCTGCGTGAGGGTAACGAGAGCGGCGGCGAAGAGAAAGGCTATGGCCACGGAGGAGGAACGTGTCACCAAGAAGAGAGTGGTTCTTGGCGAGCTTCCGAATCTCTCCAACGTCACGAATCTCAATCAGAAGAGAGAGGTCGCCAAGCCCACCAAGAGTCTTGGAGCGAAGCAAAGAAAGGCGGCTGCTCC 1954057 1954276 GAAGAGAGTGGTTCTTGGCG GAAGAGAGTGGTTCTTGGCG |||||||||||||||||||| ==================== 20 0 0 0