# [ GGGenome | 2025-04-04 18:05:07 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CGCGGATCATCTAGCATACA # count: 18 # query: TGTATGCTAGATGATCCGCG # count: 0 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CV705014|CV705014.1 UCRPT01_0006E02_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0006E02, mRNA sequence. + 95 114 GTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCCCGCTTCTGTGTTAATTGCTTTTAAATTTCATATATATATATATATATATATATATTAGAAATAAGTAATACATATATATATTCAAATAACTA 1 214 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 CV707196|CV707196.1 UCRPT01_0009H17_f Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0009H17, mRNA sequence. + 367 386 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCCCGCTTCTGTGTTAATTGCTTTTAAATTTCATATATATATATATATATATATATTAGAAATAAGTAATACATATATATATTCAAATAACTAAT 267 486 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 CV709115|CV709115.1 UCRPT01_0012G01_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0012G01, mRNA sequence. + 226 245 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCCCGCTTCTGTGTTAATTGCTTTTAAATTTCATATATATATATATATATATATATATTAGAAATAAGTAATACATATATATATTCAAATAACTA 126 345 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 CV709874|CV709874.1 UCRPT01_0013I14_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0013I14, mRNA sequence. + 252 271 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCCCGCTTCTGTGTTAATTGCTTTTAAATTTCATATATATATATATATATATATATTAGAAATAAGTAATACATATATATATTCAAATAACTAAT 152 371 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 DN958603|DN958603.1 USDA-FP/ARO_14433 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-14_B08 5', mRNA sequence. + 264 283 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 164 383 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 DY283129|DY283129.1 IC0AAA58CE10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 521 540 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 421 640 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY715567|EY715567.1 CS00-C3-702-056-A08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence. + 407 426 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 307 526 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY732235|EY732235.1 CS00-C3-704-057-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence. + 260 279 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATATATATATATATTAGAAATAAATAATACATATATATATATATATATATTCAAATAACT 160 379 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY732560|EY732560.1 CS00-C3-704-063-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence. + 261 280 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATATATATATATATTAGAAATAAATAATACATATATATATATATATATATTCAAATAACT 161 380 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY740777|EY740777.1 CS00-C3-705-076-G07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence. + 332 351 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATATATATATATATTAGAAATAAATAATACATATATATATATATATATATTCAAATAACT 232 451 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY753650|EY753650.1 CS12-C1-001-005-C10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence. + 512 531 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 412 631 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY754244|EY754244.1 CS12-C1-001-012-D07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence. + 496 515 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 396 615 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY754249|EY754249.1 CS12-C1-001-012-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence. + 496 515 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 396 615 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY776020|EY776020.1 CR05-C1-103-005-H08-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence. + 498 517 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATATTACATACATATATATATATATATATTCAAATAACTAA 398 617 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY804632|EY804632.1 CR05-C3-702-049-C06-CT.F Mandarin fruit, development stadium (3 of 3) Citrus reticulata cDNA, mRNA sequence. + 21 40 ATGAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATACATATATATATATATATATTCAAATAACTAA 1 140 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 EY857074|EY857074.1 CG32-C1-003-080-F03-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence. + 293 312 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATATATATATATATATTAGAAATAAATAATACATATATATATATATATATTCAAATAACT 193 412 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 FC882655|FC882655.1 IC0AAA58CE10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58CE10, mRNA sequence. + 517 536 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATACATATATTAGAAATAAATAATACATATATATATATATTCAAATAACTAATAAAATTA 417 636 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0 OY754326|OY754326.1 Citrus sinensis genome assembly, chromosome: 9. + 7815188 7815207 GCGGTAGTAGAGATGGCATGGATTATGCTTAGTGTGGATTACTCTAGGCTTTTTTGGCTATTATTTGGAGTATTTTCTTATGAAAATCACGAAGGAAAGCCGCGGATCATCTAGCATACAATAGCTCTCGCTTCTGTGTTATTGCTTTTAAATTTCATATATATATATATATATTAGAAATAAATAATACATATATATATATATATATATTCAAATAACT 7815088 7815307 CGCGGATCATCTAGCATACA CGCGGATCATCTAGCATACA |||||||||||||||||||| ==================== 20 0 0 0