# [ GGGenome | 2025-04-04 23:00:58 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CGGTCTGAATACATCTTTCATCA # count: 10 # query: TGATGAAAGATGTATTCAGACCG # count: 18 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FX666760|FX666760.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_7049. + 1238 1260 GACTGTCTCCGATGGGAACTTTGTGGATAGCGTGGAATGATTCAGACCGTGTGCGGGAGAGACCGAGTGGCTTTGCGGGGGAACACGGAGCGGATTTTGTCGGTCTGAATACATCTTTCATCATCTTTGCAGTGAATGGAGATGACAAATGAATCTAAGAGGAGGAAGGAGTGATGTGAG 1138 1317 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 FX698380|FX698380.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_9650. + 1343 1365 GACTGTCTCCGACAGGGACTTTGTGGATAGCGTGAAATGATTCAGACCGAGTGCGGGAGATGCCCAGTGGCTTTGCGGGAGAGCTCGGTGCGGATTTGGTCGGTCTGAATACATCTTTCATCATCATCTTTGTAGTGAATAAAGATAAATGAATCGAATCGAATCTCAGAGGAGGATG 1243 1420 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 FX732909|FX732909.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_20526. + 1307 1329 GACTGTCTCCGACAGGGACTTTGTGGATAGCGTGAAATGATTCAGACCGAGTGCGGGAGATGCCGAGTGGCTTTGCGGGAGAGCTCGGTGCGGATTTGGTCGGTCTGAATACATCTTTCATCATCATCTTTGTAGTGAATAAAGATAAATGAATCGAATCGAATCTCAGAGGAGGATGGG 1207 1386 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 AC189627|AC189627.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrS001M03, complete sequence. + 50576 50598 GACTGTCTCCGACAGGGACTTTGTGGATAGCGTGAAATGATTCAGACCGAGTGCGGGAGATGCCCAGTGGCTTTGCGGGAGAGCTCGGTGCGGATTTGGTCGGTCTGAATACATCTTTCATCATCATCTTTGTAGTGAATAAAGATAAATGAATCGAATCGAATCTCAGAGGAGGATGGGTGAGGACGGCTTCAGCGAGAGAGATCGGAACTTATAAAAAGGT 50476 50698 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 CP123894|CP123894.1 Brassica napus cultivar Xiang5A chromosome 19. + 9769819 9769841 GACTGTCTCCGACAGGGACTTTGTGGATAGCGTGAAATGATTCAGACCGAGTGCGGGAGATGCCGAGTGGCTTTGCGGGAGAACTCGGTGCGGATTTGGTCGGTCTGAATACATCTTTCATCATCATCTTTGCAGTGAGTAAAGACGAAAAGGATAAATGAATCGAAGAGGAGGATGTGTGAGGTTTGAGATGACGGCTTCAGCGAGATCGGAACTTATAAAA 9769719 9769941 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 LR778310|LR778310.1 Raphanus sativus genome assembly, chromosome: 1. + 44106330 44106352 GACTGTCTCCGATGGGAACTTTGTGGATAGCGTGGAATGATTCAGACCGTGTGCGGGAGAGACCGAGTGGCTTTGCGGGGGAACACGGAGCGGATTTTGTCGGTCTGAATACATCTTTCATCATCTTTGCAGTGAATGGAGATGACAAATGAATCTAAGAGGAGGAAGGAGTGATGTGAGAAGAAGAGGTTGAGGTTTAATAGGGAGATCGGAAATTATAAAA 44106230 44106452 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. + 7560287 7560309 GACTGTCTCCGACAGGAACTTTGTGGATAGCGTGAAATGATTCAGACCGAGTGCGGGAGATGCCGAGTGGCTTTGCGGGAGAACTAGGTGCGGATTTGGTCGGTCTGAATACATCTTTCATCATCATCTTTGCAGAGTGAATAAAAGACAAAGAAATGAATCTCAGAGGAGGAGTGATGTGATGTTTTAAGAAGACGGCTTGAGTGAGATCGGAACTTATAAA 7560187 7560409 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 OY743212|OY743212.1 Raphanus sativus genome assembly, chromosome: 6. + 44106330 44106352 GACTGTCTCCGATGGGAACTTTGTGGATAGCGTGGAATGATTCAGACCGTGTGCGGGAGAGACCGAGTGGCTTTGCGGGGGAACACGGAGCGGATTTTGTCGGTCTGAATACATCTTTCATCATCTTTGCAGTGAATGGAGATGACAAATGAATCTAAGAGGAGGAAGGAGTGATGTGAGAAGAAGAGGTTGAGGTTTAATAGGGAGATCGGAAATTATAAAA 44106230 44106452 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 OY748330|OY748330.1 Cochlearia excelsa genome assembly, chromosome: 4. + 10215399 10215421 GACTGTCTCCTATAGGAACTTTGTGGATAGCATGAAACGATTCAGACCGTGTCCGGGAGATTCCGATTGGCTTTGCTGGAGAACACGGAGCGGATTTTGTCGGTCTGAATACATCTTTCATCATCATCTTGTGGAGAAAGAAGAAGAAAGACAAATGAAATCTCTCGAGAGGAAAGAGTTTATGTGTGTGAGAGAATTAGGTTGAGATTTTAAAGAAGACGGC 10215299 10215521 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 OY755216|OY755216.1 Draba incana genome assembly, chromosome: 15. + 17483079 17483101 GACTGTCTCCAATAGGGACTTTGTGGATAGCATGAAACGATTCAGATCGGGTTCGGGAGATACCGAGTGGCTTTGCTGGAGAACACGGAGCGGATTTGGTCGGTCTGAATACATCTTTCATCATCTTTGGACTGAAATGGAGGATTGGTAGGAGAAGACAAAAGGAATCTCAGAGGAAGATTGATGTGACAAGGAAGATGAGATTTATGGAAAAGGGATTGAG 17482979 17483201 CGGTCTGAATACATCTTTCATCA CGGTCTGAATACATCTTTCATCA ||||||||||||||||||||||| ======================= 23 0 0 0 CX270639|CX270639.1 39RDBRT_UP_012_F07_05APR2004_053 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence. - 66 88 GGTCCTCACCCATCCTCCTCTGAGATTCGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 188 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 CX271785|CX271785.1 39RDBRT_UP_031_F08_20JUL2004_054 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence. - 63 85 GCTCACCCATCCTCCTCTGAGATTCGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCTCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 185 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 CX272299|CX272299.1 39RDBRT_UP_038_D09_21JUL2004_073 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence. - 17 39 TTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAGAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 139 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 DW997489|DW997489.1 BNDH2DCT_UP_006_A07_12JUN2004_063 Brassica napus seeds BNDH2DCT Brassica napus cDNA 5', mRNA sequence. - 60 82 GACCCATCCTCCTCTGAGATTCGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACGCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 182 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY016422|DY016422.1 40JKME7D_UP_020_F03_21MAY2004_021 40JKME7D Brassica napus cDNA 5', mRNA sequence. - 71 93 GATCTCAAACCTCACACATCCTCCTCTTCGATTCATTTATCCTTTTCGTCTTTACTCACTGCAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGTTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 193 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 ES937301|ES937301.1 39RDBRT_UP_094_C03_25JAN2006_027 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence. - 65 87 GGTCCTCACCCATCCTCCTCTGAGATACGATTCGATTCATTTATCCTCTTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTGGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 187 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 ES987210|ES987210.1 BNAEN1GH_UP_014_D01_31MAY2006_009 Brassica napus BNAEN1GH Brassica napus cDNA 5', mRNA sequence. - 71 93 GATCTCAAACCTCACACATCCTCCTCTTCAATTCATTTATCCTTTTCGCCTTTACTCACTGCAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGTTCTCCCGCAAAGCCACTCGGCACCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 193 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 EV071894|EV071894.1 BNSCS4CT_UP_175_C07_28MAY2007_059 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence. - 59 81 ACCCATCCTCCTCTGAGATTCGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 181 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 GR439379|GR439379.1 13JKBNM2_UP_065_A02_1OCT2007_016 13JKBNM2 Brassica napus cDNA 5', mRNA sequence. - 58 80 CCCATCCTCCTCTGAGATTCGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 1 180 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 FX761298|FX761298.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_66287. - 62 84 TCTTCTCACATCACTCCTTCCTCCTCTTAGATTCATTTGTCATCTCCATTCACTGCAAAGATGATGAAAGATGTATTCAGACCGACCAAATCCGCTCCGTGTTCCCCCGCAAAGCCACTCGGTCTGTCCCGCACACGGTCTGAATCATTCCACGCTATCCACAAAGTTCCCATCGGAGACAGTC 1 184 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 JW996055|JW996055.1 TSA: Chorispora bungeana CK_07989 mRNA sequence. - 74 96 AAATCTCAACCCTGTTCCCACATAACTCTTGCCCTGAGATTGCTTTTTTCTTCTTCTCCATTCACTCCAAAGATGATGAAAGATGTATTCAGACCGACCAAATCGGCTCCGAGCTCTCCTGCAAAGCCTCTCGGTATCTCCCGCACACGGTCTGAATCGTTTCATGCTATCCACAAAGTTCCTATCGGAGACAGTC 1 196 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 CP123878|CP123878.1 Brassica napus cultivar Xiang5A chromosome 3. - 22697032 22697054 ACCTTTTTATAAGTTCCGATCTCTCTCGCTGAAGCCGTCCTCACCCATCCTCCTCTGAGATACGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 22696932 22697154 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 HG994357|HG994357.1 Brassica napus genome assembly, chromosome: A03. - 22679255 22679277 ACCTTTTTATAAGTTCCGATCTCTCTCGCTGAAGCCGTCCTCACCCATCCTCCTCTGAGATACGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 22679155 22679377 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 HG994371|HG994371.1 Brassica napus genome assembly, chromosome: C07. - 46031412 46031434 TTTTATAAGTTCCGATCTCGCTGAAGCCGTCATCTCAAACCTCACACATCCTCCTCTTCGATTCATTTATCCTTTTCGTCTTTACTCACTGCAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGTTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 46031312 46031534 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 LR031572|LR031572.1 Brassica rapa genome, scaffold: A03. - 22453334 22453356 TTAAACCTTTTTATAAGTTCCGATCTCGCTGAAGCCGTCCTCACCCATCCTCCTCTGAGATACGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 22453234 22453456 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 LR031876|LR031876.1 Brassica oleracea HDEM genome, scaffold: C7. - 48880802 48880824 CCGATCTCGCTGAAGCCGTCATCTTAAACCTCACCCATCCTCCTCTGAGATTCGATTCGATTCATTTATCTCTCTTCGTCTTTACTCACTGCAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGTTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 48880702 48880924 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. - 46090211 46090233 TTTATAAGTTCCGATCTCACTCAAGCCGTCTTCTTAAAACATCACATCACTCCTCCTCTGAGATTCATTTCTTTGTCTTTTATTCACTCTGCAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCTAGTTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTTCCTGTCGGAGACAGTC 46090111 46090333 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0 LS974619|LS974619.2 Brassica rapa genome assembly, chromosome: A03. - 22581353 22581375 TTAAACCTTTTTATAAGTTCCGATCTCGCTGAAGCCGTCCTCACCCATCCTCCTCTGAGATACGATTCGATTCATTTATCTTTATTCACTACAAAGATGATGATGAAAGATGTATTCAGACCGACCAAATCCGCACCGAGCTCTCCCGCAAAGCCACTCGGCATCTCCCGCACTCGGTCTGAATCATTTCACGCTATCCACAAAGTCCCTGTCGGAGACAGTC 22581253 22581475 TGATGAAAGATGTATTCAGACCG TGATGAAAGATGTATTCAGACCG ||||||||||||||||||||||| ======================= 23 0 0 0