# [ GGGenome | 2025-04-05 06:44:48 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CTAAGGTCTTGAAGCTGTCT # count: 12 # query: AGACAGCTTCAAGACCTTAG # count: 11 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins EV567587|EV567587.1 RR4AO07TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. + 10 29 GCAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCGAGCGTTGTCTCTTTCACGAGGTCGAATAATGGCGACTTTG 1 129 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 FY420702|FY420702.1 Brassica rapa subsp. pekinensis mRNA, clone: BBRAF38D18, 5'-end sequence. + 424 443 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCGAGCGTTGTCTCTTTCACGAGGTCGAATAATGGTGACTTTG 324 543 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 FY438614|FY438614.1 Raphanus sativus mRNA, clone: RSCL17D18, 5' end sequence. + 375 394 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCTACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCGAGCGTTGTCTCTTTCACGAGGTCGAACAACGGCGACTTTG 275 494 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 FX730800|FX730800.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_6927. + 427 446 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCTACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCGAGCGTTGTCTCTTTCACGAGGTCGAACAACGGCGACTTTG 327 546 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 CU968551|CU968551.1 Brassica napus GSS, clone JBnB174F09, end read, primer SACL2(forward). + 274 293 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCAAGCGTTGTCTCTTTCA 174 369 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 DX043439|DX043439.1 KBrB044C01R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB044C01, genomic survey sequence. + 269 288 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCAAGCGTTGTCTCTTTCACGAGGTCGAATAATGGTGACTTTG 169 388 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 ED536901|ED536901.1 KBrB129O23R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB129O23, genomic survey sequence. + 257 276 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCAAGCGTTGTCTCTTTCACGAGGTCGAATAATGGTGACTTTG 157 376 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 HG994364|HG994364.1 Brassica napus genome assembly, chromosome: A10. + 15591357 15591376 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCAAGCGTTGTCTCTTTCACGAGGTCGAATAATGGCGACTTTG 15591257 15591476 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 LR031577|LR031577.1 Brassica rapa genome, scaffold: A10. + 12500620 12500639 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCAAGCGTTGTCTCTTTCACGAGGTCGAATAATGGTGACTTTG 12500520 12500739 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 LS974626|LS974626.2 Brassica rapa genome assembly, chromosome: A10. + 15256955 15256974 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCCACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCAAGCGTTGTCTCTTTCACGAGGTCGAATAATGGTGACTTTG 15256855 15257074 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 OY743213|OY743213.1 Raphanus sativus genome assembly, chromosome: 7. + 2029527 2029546 GTTTTGGGCCATCTAGTTTTATCCATCTGGTTGTTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTGGACAGCTTGTCTAAGGTCTTGAAGCTGTCTCCTACCATGGCTGGAGTTACGCTTCTCTCTCTCGGAAACGGTGCGCCGGATTTGTTCTCGAGCGTTGTCTCTTTCACGAGGTCGAACAACGGCGACTTTG 2029427 2029646 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 OZ000488|OZ000488.1 Cardamine chenopodiifolia genome assembly, chromosome: 30. + 12449816 12449835 GCTTTGGGTCATCTAGTTTTATCCGTTTGGTTATTTGTTCTGTTCTACTTGCTCGGAGACACGGCCGCGAGTTACTTCTGTCCTTCTTTACACAGCTTATCTAAGGTCTTGAAGCTGTCTCCTACGATGGCTGGAGTCACGCTTCTCTCTCTCGGCAACGGTGCGCCTGATTTGTTCTCAAGTGTTGTCTCCTTCACTAGGTCTAATAATGGCGATTTCG 12449716 12449935 CTAAGGTCTTGAAGCTGTCT CTAAGGTCTTGAAGCTGTCT |||||||||||||||||||| ==================== 20 0 0 0 FX666738|FX666738.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_9739. - 894 913 CAAAGTCGCCGTTGTTCGACCTCGTGAAAGAGACAACGCTCGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTAGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 794 1013 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 FX697805|FX697805.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_12700. - 933 952 CAAAGTCACCATTATTCGACCTCGTGAAAGAGACAACGCTTGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTGGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 833 1052 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 JT801542|JT801542.1 TSA: Raphanus sativus RS16995 mRNA sequence. - 1414 1433 CAAAGTCGCCGTTGTTCGACCTCGTGAAAGAGACAACGCTCGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTAGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 1314 1533 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 AC189238|AC189238.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB015N02, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces. - 25522 25541 CAAAGTCACCATTATTCGACCTCGTGAAAGAGACAACGCTTGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTGGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 25422 25641 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 CU695315|CU695315.1 Brassica rapa subsp. pekinensis clone KBrH081M22, complete sequence. - 82810 82829 CAAAGTCACCATTATTCGACCTCGTGAAAGAGACAACGCTTGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTGGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 82710 82929 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 CP123880|CP123880.1 Brassica napus cultivar Xiang5A chromosome 5. - 5164134 5164153 CAAAGTCGCCATTATTCGACCTCGTGAAAGAGACAACGCTTGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTGGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 5164034 5164253 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 LR778317|LR778317.1 Raphanus sativus genome assembly, chromosome: 8. - 30949855 30949874 CAAAGTCGCCGTTGTTCGACCTCGTGAAAGAGACAACGCTCGAGAACAAATCCGGCGCACCGTTTCCGAGAGAGAGAAGCGTAACTCCAGCCATGGTAGGAGACAGCTTCAAGACCTTAGACAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAGATGGATAAAACTAGATGGCCCAAAAC 30949755 30949974 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 LT669795|LT669795.1 Arabis alpina genome assembly, chromosome: 8. - 14690931 14690950 CGAAATCGCCATTGTTCGACCTAGTGAAGGAGACAACACTTGAGAACAAATCAGGCGCACCGTTGCCGAGAGAGAGAAGCGTGACTCCAGCCATTGTAGGAGACAGCTTCAAGACCTTAGATAAGCTGTCTAAAGAAGGACAGAAGTAACTCGCGGCCGTGTCTCCGAGCAAGTAGAACAGAACAAACAACCAAATGGATAAAACAAGATGACCCAAAAC 14690831 14691050 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 OY748331|OY748331.1 Cochlearia excelsa genome assembly, chromosome: 5. - 30849182 30849201 CGAAATCTCCATTATTGGACCTAGTGAAAGAGACAACACTAGAGAACAAATCAGGGGCGCCGTTGCCTAGAGACAGAAGCGTGACACCGGCCATCGTAGGAGACAGCTTCAAGACCTTAGATAAGCTGTCCAAAGAAGGACAGAAGTAACTCGCAGCCGTGTCGCCGAGCAAGTAGAACAGAACAAACAACCATATGGACAAAACTAGATGGCCTAAAAC 30849082 30849301 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 OX104114|OX104114.1 Limnoperna fortunei genome assembly, chromosome: 4. - 62030342 62030361 CATTCAGATATGTCTCAACTAAAGCATCCACCATATACTGTATATATGGAGAGACAATTTAAATGTCTTTTTTCTTTTTTACTATGGTTTTAAAATATTTAGACAGCTTCAAGACCTTAGACATGTTAGATACTTAAAACTTTTAGCATTTCGGCAAATAATGAACATTTGATGATGAAGTTCAGACTGTCTTACTTCAAAACCAACATTAAACATTCTA 62030242 62030461 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0 OY754961|OY754961.1 Ferdinandea cuprea genome assembly, chromosome: 4. - 43433122 43433141 AAGTTACGGTCTTAAATACCGCTCTCCCTACCGCTAACAATTGGCCATGTATAATTCTAATACTCTGTGATCTTTTTGCTCAGAAAGAGCGTTTATCAAAAGACAGCTTCAAGACCTTAGGCAATTGGTCCTTTTCTGATTTTCTTATTGGAGCCCAAATTTGGACTGTTATAATACTTTTAAGGAGTTTTATGGGTTTTTATATTCGCTATGAAGCGAA 43433022 43433241 AGACAGCTTCAAGACCTTAG AGACAGCTTCAAGACCTTAG |||||||||||||||||||| ==================== 20 0 0 0