# [ GGGenome | 2025-04-04 07:40:16 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CTAGATTCTCCACATCCAGG # count: 13 # query: CCTGGATGTGGAGAATCTAG # count: 8 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CX273040|CX273040.1 39RDBRT_UP_049_D05_22JUL2004_041 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence. + 126 145 AGCGAGCGATAACTCGTCCCGAGTCGCCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAAACAGTTTAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAACGAAGAAGAAGAAGATGAGTTTCGTATTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAG 26 245 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 DY010916|DY010916.1 BNSCSICT_UP_013_A08_23NOV2004_064 Brassica napus seed coat BNSCSICT Brassica napus cDNA 5', mRNA sequence. + 127 146 AGCGAGCGATAATTCGTCCCGAGTCGTCTCGCTCCGACGGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTTAAATCCTTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAAAGAAGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAGAGA 27 246 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EE474528|EE474528.1 BNYS2DCT_UP_015_A08_01MAR2005_064 Brassica napus seeds BNYS2DCT Brassica napus cDNA 5', mRNA sequence. + 122 141 TAGCGAGCGATAACTCGTCCCGAGTCGCCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAACGAAGAAGAAGAAGATGAGTTTCGTATTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAG 22 241 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EV040878|EV040878.1 BNSCS3CT_UP_055_B02_04MAY2007_014 Brassica napus BNSCS3CT Brassica napus cDNA 5', mRNA sequence. + 127 146 TAGCGAGCGATAACTCGTCCCGAGTCGCCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAACGAAGAAGAAGAAGATGAGTTTCGTATTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAG 27 246 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EV112996|EV112996.1 0118308 Brassica napus Root library Brassica napus cDNA, mRNA sequence. + 171 190 AGCGAGCGATAATTCGTCCCGAGTCGTCTCGCTCCGACGGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTTAAATCCTTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAAAGAAGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAGAGA 71 290 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EX091229|EX091229.1 BR077519 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-085H01 5', mRNA sequence. + 81 100 CGAGTCGTCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTTGAAAGAAGACGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGGTTCATACCCGAG 1 200 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EX094081|EX094081.1 BR080371 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-144H08 5', mRNA sequence. + 136 155 TAGCGAGCGATAACTCGTCCCGAGTCGTCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTTGAAAGAAGACGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGTTTAGAGAGCGGATTCTCAGGGTTCATACCCGAGA 36 255 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EX097891|EX097891.1 BR084181 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-057C04 5', mRNA sequence. + 139 158 TAGCGAGCGATAACTCGTCCCGAGTCGTCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTTGAAAGAAGACGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGGTTCATACCCGAG 39 258 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 EX098681|EX098681.1 BR084971 root cDNA library KFRT Brassica rapa subsp. pekinensis cDNA clone KFRT-007H04 5', mRNA sequence. + 135 154 TAGCGAGCGATAACTCGTCCCGAGTCGTCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTTGAAAGAAGACGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGGTTCATACCCGAG 35 254 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 FY066390|FY066390.1 Brassica rapa subsp. pekinensis mRNA, clone:BBRAF08H14, 5'-end sequence. + 128 147 AGCGAGCGATAACTCGTCCCGAGTCGCCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAAACAGTTTAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAACGAAGAAGAAGAAGATGAGTTTCGTATTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAG 28 247 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 GT081273|GT081273.1 c08_12na_2k.s 12na Brassica napus cDNA clone c08_12na_2k 5, mRNA sequence. + 141 160 AGCGAGCGATAATTCGTCCCGAGTCGTCTCGCTCCGACGGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTTAAATCCTTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTAGAAAGAAGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGTTTCATACCCGAGAGA 41 260 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 FX704971|FX704971.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_9536. + 128 147 TAGCGAGCGATAACTCGTCCCGAGTCGTCTCGCTCCGACGGCGATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTCAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGCTCTTGTGCGTTTTGAAAGAAGACGAAGAAGATGAGTTTCGTTTTCAGGGGAAGTAGAGGAGATTTAGAGAGCGGATTCTCAGGGTTCATACCCGAG 28 247 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 CP123890|CP123890.1 Brassica napus cultivar Xiang5A chromosome 15. + 12462489 12462508 CTATATCGTCGACAAAAATTTGAACAGCAGCGAGCGAGCGATAATTCCATCGTCTCCCTCCGATGTTAGCTTCTCTTAAACAGTTTAAATCCGTGATTCTCTAGATTCTCCACATCCAGGAGGTGAGTTTCTCCTCCGATCTCTCGTTCCATTCGTTTTCTGTCGATTATAGAATCGAATATCCCTCTCGTCGTCTATTTTACGAAAGATTCGTCATCAT 12462389 12462608 CTAGATTCTCCACATCCAGG CTAGATTCTCCACATCCAGG |||||||||||||||||||| ==================== 20 0 0 0 FX759046|FX759046.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_31807. - 523 542 CTCGGGTATGAACCCTGAGAATCCGCTCTCTAAATCTCCTCTACTTCCCCTGAATACGAAACTCATCTTCTTCTTCTACTTTCTAAACGCACAAGAGCCTCCTGGATGTGGAGAATCTAGAGAATCACGGATTTAAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCGTCGGAGCGAGGCGACTCGGGACGAGTTATCGCTCGCTA 423 642 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 AC189487|AC189487.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB084F02, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces. - 154497 154516 GATGATGACGAATCTTTCGTAAAATCGACGACCAGAGGGATATTCGATTCTATGATCGGCGGAAACGAATGAAACGAGAGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCACGGATTTGAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCGTCGGAGCGAGACGACTCGGGACGAGTTATCGCTCGCTA 154397 154616 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 CP123879|CP123879.1 Brassica napus cultivar Xiang5A chromosome 4. - 59545945 59545964 GATGATGAGGAATATTTCGTAAAATAGACGAGGAGAGGGATATCCGATTCTATAATCGGCGGAAACGAATGGAACGAGAGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCGCGGATTTGAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCGTCGGAGCGAGACGACTCGGGACGAGTTATCGCTCGCTA 59545845 59546064 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 HG994363|HG994363.1 Brassica napus genome assembly, chromosome: A09. - 43397407 43397426 GATGATGACGAATCTTTCGTAAAATAGACGAGGAGAGGGCTATTCGATTCTATGATCGGCGGAAACGAATGAAACGAGAGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCACGGATTTGAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCGTCGGAGCGAGGCGACTCGGGACGAGTTATCGCTCGCTA 43397307 43397526 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 HG994372|HG994372.1 Brassica napus genome assembly, chromosome: C08. - 29297458 29297477 TGATGACGAATCTTTCGTAAAATAGACGACGAGAGGGATATTCGATTCTATAATCGACAGAAAACGAATGGAACGAGAGGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCAAGGATTTAAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCCGTCGGAGCGAGACGACTCGGGACGAATTATCGCTCGCT 29297358 29297577 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 LR031568|LR031568.1 Brassica rapa genome, scaffold: A09. - 47720614 47720633 GATGATGACGAATCTTTCGTAAAATAGACGAGGAGAGGGCTATTCGATTCTATGATCGGCGGAAACGAATGAAACGAGAGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCACGGATTTGAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCGTCGGAGCGAGGCGACTCGGGACGAGTTATCGCTCGCTA 47720514 47720733 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 LR031879|LR031879.1 Brassica oleracea HDEM genome, scaffold: C8. - 38583140 38583159 ATGATGACGAATCTTTCGTAAAATAGACGACGAGAGGGATATTCGATTCTATAATCGACAGAAAACGAATGGAACGAGAGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCACGGATTTAAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATTATCGCTCGCTCGCTGCTGTTCAAATTTTTGTCGACGATATAG 38583040 38583259 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0 LS974625|LS974625.2 Brassica rapa genome assembly, chromosome: A09. - 58187118 58187137 GATGATGACGAATCTTTCGTAAAATAGACGAGGAGAGGGCTATTCGATTCTATGATCGGCGGAAACGAATGAAACGAGAGATCGGAGGAGAAACTCACCTCCTGGATGTGGAGAATCTAGAGAATCACGGATTTGAACTGTTTAAGAGAAGCTAACATCGGAGGGAGACGATGGAATCGCCGTCGGAGCGAGGCGACTCGGGACGAGTTATCGCTCGCTA 58187018 58187237 CCTGGATGTGGAGAATCTAG CCTGGATGTGGAGAATCTAG |||||||||||||||||||| ==================== 20 0 0 0