# [ GGGenome | 2025-04-05 05:57:45 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CTCGGAAGGCCAGTAAGGTT # count: 0 # query: AACCTTACTGGCCTTCCGAG # count: 21 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CF510141|CF510141.1 USDA-FP_125000-656 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_F04 5', mRNA sequence. - 119 138 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 19 238 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 CK934391|CK934391.1 CGF1004259_F07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_F07 5', mRNA sequence. - 152 171 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 52 271 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 CX046078|CX046078.1 UCRCS07_5F11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-5F11-L21-1-6.g, mRNA sequence. - 107 126 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 7 226 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY650574|EY650574.1 CS00-C1-100-012-E04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence. - 140 159 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 40 259 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY651310|EY651310.1 CS00-C1-100-020-F10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence. - 93 112 CTCTTCATTTTACTCTCAAATTCAGGTGTTTTTCACAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 1 212 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY656671|EY656671.1 CS00-C1-100-123-D04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence. - 121 140 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 21 240 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY657908|EY657908.1 CS00-C1-100-125-D11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence. - 113 132 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 13 232 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY659755|EY659755.1 CS00-C1-101-014-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. - 142 161 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 42 261 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY660619|EY660619.1 CS00-C1-101-024-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. - 116 135 ATCTTCTCCTCTTCTTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 16 235 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY661104|EY661104.1 CS00-C1-101-029-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. - 117 136 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 17 236 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY663770|EY663770.1 CS00-C1-101-059-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. - 123 142 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 23 242 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY710319|EY710319.1 CS00-C3-701-097-D12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence. - 122 141 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 22 241 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY710342|EY710342.1 CS00-C3-701-097-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence. - 80 99 CTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 1 199 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY713495|EY713495.1 CS00-C3-702-031-F04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence. - 15 34 CCACGCGTCCGGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 1 134 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY742482|EY742482.1 CS00-C3-705-071-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence. - 129 148 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 29 248 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY749961|EY749961.1 CS00-C5-003-081-F11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence. - 132 151 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 32 251 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 EY753936|EY753936.1 CS12-C1-001-008-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence. - 120 139 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 20 239 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 FC875330|FC875330.1 C31402G04EF CTVClemen1 Citrus clementina cDNA clone C31402G04, mRNA sequence. - 149 168 TCTTCTCCTCTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGAAGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATTGCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGCTTCTGACTGGA 49 268 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 JG638124|JG638124.1 SCASC2NG_T3_029_F03_20DEC2006_021 SCASC2NG cell culture from Sanguinaria canadensis Sanguinaria canadensis cDNA, mRNA sequence. - 119 138 TCTTCTCTGGTTAAGTTGCTAGGTTCGAATTCGAGGTTCTGAAGAATGGGGAGTACTGGTGCTGACTATGGTGAGTACACTTACGCTGATTTGGTGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCGATCACTGGGGCTGGTGGGTTCATTGCATCTCACATTGCCCGCCGACTGAAGAGTGAGGGTCACTACATTATTGCCTCAGACTGGA 19 238 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 JG638602|JG638602.1 SCASC2NG_T3_034_G10_20DEC2006_068 SCASC2NG cell culture from Sanguinaria canadensis Sanguinaria canadensis cDNA, mRNA sequence. - 125 144 TCTTCTCTGGTTAAGTTGCTAGGTTCGAATTCGAGGTTCTGAAGAATGGGGAGTACTGGTGCTGACTATGGTGAGTACACTTACGCTGATTTGGTGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCGATCACTGGGGCTGGTGGGTTCATTGCATCTCACATTGCCCGCCGACTGAAGAGTGAGGGTCACTACATTATTGCCTCAGACTGGA 25 244 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0 JG639409|JG639409.1 SCASC2NG_T3_043_E03_20DEC2006_023 SCASC2NG cell culture from Sanguinaria canadensis Sanguinaria canadensis cDNA, mRNA sequence. - 124 143 TCTTCTCTGGTTAAGTTGCTAGGTTCGAATTCGAGGTTCTGAAGAATGGGGAGTACTGGTGCTGACTATGGTGAGTACACTTACGCTGATTTGGTGAGGGAACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCGATCACTGGGGCTGGTGGGTTCATTGCATCTCACATTGCCCGCCGACTGAAGAGTGAGGGTCACTACATTATTGCCTCAGACTGGA 24 243 AACCTTACTGGCCTTCCGAG AACCTTACTGGCCTTCCGAG |||||||||||||||||||| ==================== 20 0 0 0