# [ GGGenome | 2025-04-05 17:20:10 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CTTAGACATGCCAAGAAGCTGA # count: 10 # query: TCAGCTTCTTGGCATGTCTAAG # count: 18 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FX700879|FX700879.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_6338. + 409 430 TCGGATGAAAGGCTGACTGCCTGGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTCCCTTTGCCGGCTCTGTGACATACGCAGCAGGCCATA 309 530 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 FX740843|FX740843.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_25964. + 375 396 TTGGATGAAAGGCCGATTGCCTCGAAGACGAACCTCCAACGAGTTTCAACGAAAGAGACTGTTCCGATACACCGTTTTGCCCGGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATCGGGGCTGCTTTTGAGTGCACAGCTGTTGGCCTGAGGATCTCGTGAGTCTCTTCCTTTGCAGGCTCGGTGACGTACGCAGCAGGCCACA 275 496 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 JT807612|JT807612.1 TSA: Raphanus sativus RS23065 mRNA sequence. + 344 365 TTGGATGAAAGGCCGATTGCCTCGAAGACGAACCTCCAACGAGTTTCAACGAAAGAGACTGTTCCGATACACCGTTTTGCCCGGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATCGGGGCTGCTTTTGAGTGCACAGCTGTTGGCCTGAGGATCTCGTGAGTCTCTTCCTTTGCAGGCTCGGTGACGTACGCAGCAGGCCACA 244 465 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 BH554031|BH554031.1 BOHBX61TF BOHB Brassica oleracea genomic clone BOHBX61, genomic survey sequence. + 358 379 TTGGATGGAAGGCTGATTGCCTCGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTTCCTTTGCCGGCTCGGTGACATACGCAGCAGGCCATA 258 479 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 BZ018884|BZ018884.1 oeh23b12.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence. + 527 548 TTGGATGGAAGGCTGATTGCCTCGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTTCCTTTGCCGGCTCGGTGACATACGCAGCAGGCCATA 427 648 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 AC183497|AC183497.1 Brassica oleracea, *** SEQUENCING IN PROGRESS ***. + 278229 278250 TTGGATGGAAGGCTGATTGCCTCGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTTCCTTTGCCGGCTCGGTGACATACGCAGCAGGCCATA 278129 278350 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 AC236897|AC236897.1 Brassica napus clone JBnB187B24, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces. + 101993 102014 TTGGATGAAAGGCTGACTGCCTGGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTTCCTTGGCCGGCTCGGTGACATACGCAGCAGGCCATA 101893 102114 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 AC236899|AC236899.1 Brassica napus clone JBr037K23, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces. + 63376 63397 TTGGATGAAAGGCTGACTGCCTGGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTTCCTTGGCCGGCTCGGTGACATACGCAGCAGGCCATA 63276 63497 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 CP123888|CP123888.1 Brassica napus cultivar Xiang5A chromosome 13. + 40160596 40160617 TTGGATGGAAGGCTGATTGCCTCGAAGACGAACCTCCGACGAGTTTCAATGAAAGAGACTGTTCTGATACACCGTTTTGGCTAGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATAGGGGCGGCTTTTGAGTGCACAGCTGTTGGCCTGAGTATCTCGTGAGTCTCTTCCTTTGCCGGCTCGGTGACATACGCAGCAGGCCATA 40160496 40160717 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 OY743208|OY743208.1 Raphanus sativus genome assembly, chromosome: 2. + 34624066 34624087 TTGGATGAAAGGCCGATTGCCTCGAAGACGAACCTCCAACGAGTTTCAACGAAAGAGACTGTTCCGATACACCGTTTTGCCCGGACTCCCCGAGGCTGAGCTTAGACATGCCAAGAAGCTGATCAACATTAATCGGGGCTGCTTTTGAGTGCACAGCTGTTGGCCTGAGGATCTCGTGAGTCTCTTCCTTTGCAGGCTCGGTGACGTACGCAGCAGGCCACA 34623966 34624187 CTTAGACATGCCAAGAAGCTGA CTTAGACATGCCAAGAAGCTGA |||||||||||||||||||||| ====================== 22 0 0 0 DK574635|DK574635.1 Brassica oleracea var. viridis mRNA, clone: KALE-155K09, 3' end sequence. - 280 301 TATGGCCTGCTGCGTATGTCACCGAGCCGGCAAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCGAGGCAATCAGCCTTCCATCCAA 180 401 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 EV084083|EV084083.1 BNSCS5CT_UP_090_H10_29MAY2007_066 Brassica napus BNSCS5CT Brassica napus cDNA 5', mRNA sequence. - 252 273 TATGGCCTGCTGCGTATGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCAA 152 373 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 EX099875|EX099875.1 BR086165 root cDNA library KFRT Brassica rapa subsp. pekinensis cDNA clone KFRT-023G03 5', mRNA sequence. - 131 152 ATGGCCTGCTGCGATATGTCACAGAGCCGGCAAAGGGAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCGA 31 252 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 EY909024|EY909024.1 RR2EE26TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. - 609 630 TGTGGCCTGCTGCGTACGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATCCTCACGCCAACAGCTGTGCACTCAAAAGCAGCCCCGATTAACGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGT 509 646 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 FD570418|FD570418.1 RS2FE25TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 566 587 TGTGGCCTGCTGCGTACGTCACCGAGCCTGCAAAGGAAGAGACTCACGAGATCCTCAGGCCAACAGCTGTGCACTCAAAAGCAGCCCCGATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCCGGGCAAAACGGTGTATCGGAACAGTCTCTTTCGTTGAAACTCGTTGGAGGTTCGTCTTCGAGGCAATCGGCCTTTCATCCAA 466 687 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 FD964964|FD964964.1 RR1GW25TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence. - 467 488 TATGGCCTGCTGCCTACGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATCCTCAGGCCAACAGCTGTGCACTCGAAAGCAGCCCCGATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCCGGGCAAAACGGTGTATCGGAACAGTCTCTTTCGTTGAAACTCGTTGGTGGTTCGTCTTCGAGGCAGTCGGCCTTTCATCCAA 367 588 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 FG556422|FG556422.1 BN18DYSC_UP_040_H04_19FEB2008_018 BN18DYSC Brassica napus cDNA 5', mRNA sequence. - 616 637 TATGGCCTGCTGCGTATGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTC 516 714 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 FX659119|FX659119.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_17650. - 1027 1048 TGTGGCCTGCTGCGTACGTCACCGAGCCTGCAAAGGAAGAGACTCACGAGATCCTCAGGCCAACAGCTGTGCACTCAAAAGCAGCCCCGATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCCGGGCAAAACGGTGTATCGGAACAGTCTCTTTCGTTGAAACTCGTTGGAGGTTCGTCTTCGAGGCAATCGGCCTTTCATCCAA 927 1148 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 FX735160|FX735160.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_32292. - 1031 1052 TATGGCCTGCTGCGTATGTCACAGAGCCGGCAAAGGGAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCGA 931 1152 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 BH669045|BH669045.1 BOMGN42TF BO_2_3_KB Brassica oleracea genomic clone BOMGN42, genomic survey sequence. - 636 657 TATGGCCTGCTGCGTATGTCACCGAGCCGGCAAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGGTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGG 536 670 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 CU944612|CU944612.1 Brassica napus GSS, clone JBnB055L10, end read, primer SACL2(forward). - 298 319 TATGGCCTGCTGCGTATGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCAA 198 419 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 CP123877|CP123877.1 Brassica napus cultivar Xiang5A chromosome 2. - 10209917 10209938 TATGGCCTGCTGCGTATGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCAA 10209817 10210038 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 HG994355|HG994355.1 Brassica napus genome assembly, chromosome: A01. - 10401897 10401918 TATGGCCTGCTGCGTATGTCACCGAGCCGGCCAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCAA 10401797 10402018 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 HG994365|HG994365.1 Brassica napus genome assembly, chromosome: C01. - 16555161 16555182 TATGGCCTGCTGCGTATGTCACCGAGCCGGCAAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCGAGGCAATCAGCCTTCCATCCAA 16555061 16555282 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 LR031571|LR031571.1 Brassica rapa genome, scaffold: A01. - 10176476 10176497 TATGGCCTGCTGCGTATGTCACAGAGCCGGCAAAGGGAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCGA 10176376 10176597 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 LR031878|LR031878.1 Brassica oleracea HDEM genome, scaffold: C1. - 16497688 16497709 TATGGCCTGCTGCGTATGTCACCGAGCCGGCAAAGGAAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCGAGGCAATCAGCCTTCCATCCAA 16497588 16497809 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 LR778314|LR778314.1 Raphanus sativus genome assembly, chromosome: 5. - 8994068 8994089 TGTGGCCTGCTGCGTACGTCACCGAGCCTGCAAAGGAAGAGACTCACGAGATCCTCAGGCCAACAGCTGTGCACTCAAAAGCAGCCCCGATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCCGGGCAAAACGGTGTATCGGAACAGTCTCTTTCGTTGAAACTCGTTGGAGGTTCGTCTTCGAGGCAATCGGCCTTTCATCCAA 8993968 8994189 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0 LS974617|LS974617.2 Brassica rapa genome assembly, chromosome: A01. - 10200195 10200216 TATGGCCTGCTGCGTATGTCACAGAGCCGGCAAAGGGAGAGACTCACGAGATACTCAGGCCAACAGCTGTGCACTCAAAAGCCGCCCCTATTAATGTTGATCAGCTTCTTGGCATGTCTAAGCTCAGCCTCGGGGAGTCTAGCCAAAACGGTGTATCAGAACAGTCTCTTTCATTGAAACTCGTCGGAGGTTCGTCTTCCAGGCAGTCAGCCTTTCATCCGA 10200095 10200316 TCAGCTTCTTGGCATGTCTAAG TCAGCTTCTTGGCATGTCTAAG |||||||||||||||||||||| ====================== 22 0 0 0