# [ GGGenome | 2025-03-14 21:03:36 ] # database: DDBJ release 134.0 (Mar, 2024) # query: CTTATAGGCCGGATGATGGA # count: 8 # query: TCCATCATCCGGCCTATAAG # count: 14 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins EV568808|EV568808.1 RR4B130TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. + 317 336 GTACTAAGAGAGCCCCCACAATCTTTTCTGAGTACAATGGAGGAGTATATTAAAGAAGCACCGCGTGCGGTCGATGCCCCAGCTGAGCCACTGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGTAGAACGTGAAGTTGTGTTGCCTTCAGATGATGTCGTTCTTGTATCTGAAGAGACTGAACCTTCTCCCC 217 436 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 FD550942|FD550942.1 RR3FE20TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence. + 362 381 GTACTAAGAGAGCCCCCACAATCTTTTCTGACTACAATGGAGGAGTATATTAAAGAAGCCCCACGTGCGGTCGATGCCCCAGCTGAGCCACTGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGTAGAACGTGAAGTTGTGTTGCCTTCAGATGATGTCGTTCTTGTATCCGAAGAGACTGAACCTTCTCCCC 262 481 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 FY430156|FY430156.1 Raphanus sativus mRNA, clone: RSCF09C09, 5' end sequence. + 328 347 GTACTAAGAGAGCCCCCACAATCTTTTCTGAGTACAATGGAGGAGTATATCAAAGAAGCCCCACGTGCCGTCGATGCCCCAGCTGAGCCACTGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGTAGAACGTGAAGTTGTGTTGCCTTCAGATGATGTTGTTCTTGTATCTGAAGAGACTGAACCTTCTCCCC 228 447 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 FY446679|FY446679.1 Raphanus sativus mRNA, clone: RSCS02G02, 5' end sequence. + 548 567 GTACTAAGAGAGCCCCCACAATCTTTTCTGAGTACAATGGAGGAGTATATCACAGAAGCCCCACGTGCCGTCGATGCCCCAGCTGAGCCACTGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGTAGA 448 602 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 FY449604|FY449604.1 Raphanus sativus mRNA, clone: RSCS10N16, 5' end sequence. + 446 465 GTACTAAGAGAGCCCCCACAATCTTTTCTGAGTACAATGGAGGAGTATATCAAAGAAGCCCCACGTGCCGTCGATGCCCCAGCTGAGCCACTGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGTAGAACGTGAAGTTGTGTTGCCTTCAGATGATGTTGTTCTTGTATCTGAAGAGACTGAACCTTCTCCCC 346 565 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 FX657651|FX657651.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_12031. + 1120 1139 GTACTAAGAGAGCCCCCACAATCTTTTCTGAGTACAATGGAGGAGTATATCAAAGAAGCCCCACGTGCCGTCGATGCCCCAGCTGAGCCACTGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGTAGAACGTGAAGTTGTGTTGCCTTCAGATGATGTTGTTCTTGTATCTGAAGAGACTGAACCTTCTCCCC 1020 1239 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 LR031874|LR031874.1 Brassica oleracea HDEM genome, scaffold: C2. + 50561317 50561336 TGAGCCACTGGTAGATACATATTTTCTCATATTAGTGATCATTTTGTCTATTTCTCTGGGTTTTATGTGCTAAATGAAGTTGTCTACATGCAGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATGCTGAACCGTCTCATGAAGAACGTGAAGTTGTGTTGCCTTCAGATGATGTCGTTCTTGTATCTGAAGATACTGAACCTTCTCCCC 50561217 50561436 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. + 38984138 38984157 CTAACTATTTTCTCATATGAGTGATCCAAGAATTTGGGCCTTTTGAACTTTCTCTCTGAGATTTATGCGCTAATGAAGTTTGTCTACATGCAGCTTCTAACTTATAGGCCGGATGATGGACTTCCTGACGAAGATACTGAACCGTCTCATGTAGAACGTGGAGTTGTGCTGTCTTCGGATGATGTCGTTCTTGTATCTGAAGAGACTGAATTTTCTCCTC 38984038 38984257 CTTATAGGCCGGATGATGGA CTTATAGGCCGGATGATGGA |||||||||||||||||||| ==================== 20 0 0 0 FX686155|FX686155.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_3814. - 857 876 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTTCACGTTCTTCATGCGACTGTTCAGTCTCATCGCCAGGAAGTCCATCATCCGGCCTATAAGTTAGGAGCAGTGGTACTGGGACATCGACAGCTCGCGGTGCTTCTTTAATATATTCTTCCATTGTTGTCAAAAAAGACTGCGGGGGCTCTCTTAACACAGG 757 976 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 FX730583|FX730583.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_1512. - 847 866 GGGGAGAAGGTTCAGTCTCTTCAGATACAAGAACAACATCATCTGAAGGCAACACAACTTCACGTTCTACATGAGACGGTTCAGCATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCAGTGGCTCAGCTGGGGCATCGACGGCACGTGGGGCTTCTTTGATATACTCCTCCATTGTACTCAGAAAAGATTGTGGGGGCTCTCTTAGTAC 747 966 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 FX736048|FX736048.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_18122. - 855 874 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTCCACGTTCTACATGAGACGGTTCAGTATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCAGTGGTACTGGGACATCGACAGCACGCGGTGCTTCTTTAATATATTCTTCCATTGTTGTCAGAAAAGACTGTGGGGGCTCTCTTAACACAGG 755 974 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 JT788383|JT788383.1 TSA: Raphanus sativus RS03836 mRNA sequence. - 589 608 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTTCACGTTCTTCATGCGACTGTTCAGTCTCATCGCCAGGAAGTCCATCATCCGGCCTATAAGTTAGGAGCAGTGGTACTGGGACATCGACAGCTCGCGGTGCTTCTTTAATATATTCTTCCATTGTTGTCAAAAAAGACTGCGGGGGCTCTCTTAACACAGG 489 708 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 JT788384|JT788384.1 TSA: Raphanus sativus RS03837 mRNA sequence. - 589 608 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTTCACGTTCTTCATGCGACTGTTCAGTCTCATCGCCAGGAAGTCCATCATCCGGCCTATAAGTTAGGAGCAGTGGTACTGGGACATCGACAGCTCGCGGTGCTTCTTTAATATATTCTTCCATTGTTGTCAAAAAAGACTGCGGGGGCTCTCTTAACACAGG 489 708 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 JT788385|JT788385.1 TSA: Raphanus sativus RS03838 mRNA sequence. - 589 608 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTTCACGTTCTTCATGCGACTGTTCAGTCTCATCGCCAGGAAGTCCATCATCCGGCCTATAAGTTAGGAGCAGTGGTACTGGGACATCGACAGCTCGCGGTGCTTCTTTAATATATTCTTCCATTGTTGTCAAAAAAGACTGCGGGGGCTCTCTTAACACAGG 489 708 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 JT788386|JT788386.1 TSA: Raphanus sativus RS03839 mRNA sequence. - 589 608 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTTCACGTTCTTCATGCGACTGTTCAGTCTCATCGCCAGGAAGTCCATCATCCGGCCTATAAGTTAGGAGCAGTGGTACTGGGACATCGACAGCTCGCGGTGCTTCTTTAATATATTCTTCCATTGTTGTCAAAAAAGACTGCGGGGGCTCTCTTAACACAGG 489 708 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 JT804830|JT804830.1 TSA: Raphanus sativus RS20283 mRNA sequence. - 816 835 GGGGAGAAGGTTCAGTCTCTTCAGATACAAGAACAACATCATCTGAAGGCAACACAACTTCACGTTCTACATGAGACGGTTCAGCATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCAGTGGCTCAGCTGGGGCATCGACGGCACGTGGGGCTTCTTTGATATACTCCTCCATTGTACTCAGAAAAGATTGTGGGGGCTCTCTTAGTAC 716 935 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 AC254604|AC254604.1 Capsella rubella clone CAP23-D18, complete sequence. - 11390 11409 GCGGGGGAGAAGGTTCTGTCTCTTCTGATGCAACCACAACATCATCTGAAGGTAACATGTCACGTTCTTCATGCGACGGTTCAGTGTCTTCGGCAGTCAGTCCATCATCCGGCCTATAAGTTAGAAGCTGAATGCAGAAAGCTCCATTAGCACATATGACAAAGAAGAAAAAAAGAAGGCCAAAAGACCAAAAATATTGTATAGGCATACATACCAGTGG 11290 11509 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 AC254607|AC254607.1 Capsella rubella clone CAP08-M18, complete sequence. - 23848 23867 GCGGGGGAGAAGGTTCTGTCTCTTCTGATGCAACCACAACATCATCTGAAGGTAACATGTCACGTTCTTCATGCGACGGTTCAGTGTCTTCGGCAGTCAGTCCATCATCCGGCCTATAAGTTAGAAGCTGAATGCAGAAAGCTCCATTAGCACATATGACAAAGAAGAAAAAAAGAAGGCCAAAAGACCAAAAATATTGTATAGGCATACATACCAGTGG 23748 23967 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 LR778310|LR778310.1 Raphanus sativus genome assembly, chromosome: 1. - 17062996 17063015 GGGGAGAAGGTTCAGTCTCTTCAGATACAAGAACAACATCATCTGAAGGCAACACAACTTCACGTTCTACATGAGACGGTTCAGCATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCTAAATATAGACAACTTCATTAGACATTAGAAAGAGGCCAAAACACCAGAATACTTGGATCACTAATATAAGAGAATATGCATATACCAGTGG 17062896 17063115 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 OU466858|OU466858.1 Thlaspi arvense genome assembly, chromosome: 2. - 8160433 8160452 GCGGGGGAGAAGGTTCAGTCTCTTCAGATACAGGAACGACATCATCAGAAGGCAAAAATTCACGTTCCTCGTGAGCCGGTTCAGTATCTTCGGCCGAAAGTCCATCATCCGGCCTATAAGTTAGAAGCTGCATGTAGACAACTTCATTAGCACATAACAAACCCAGAGAAAGAGGCCAAACGGTCAAACGTCTTGAATCACTTATATGAGAAACTATGCT 8160333 8160552 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. - 14666363 14666382 GAGGAGAAAATTCAGTCTCTTCAGATACAAGAACGACATCATCCGAAGACAGCACAACTCCACGTTCTACATGAGACGGTTCAGTATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCTGCATGTAGACAAACTTCATTAGCGCATAAATCTCAGAGAGAAAGTTCAAAAGGCCCAAATTCTTGGATCACTCATATGAGAAAATAGTTAG 14666263 14666482 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0 OY743212|OY743212.1 Raphanus sativus genome assembly, chromosome: 6. - 17062996 17063015 GGGGAGAAGGTTCAGTCTCTTCAGATACAAGAACAACATCATCTGAAGGCAACACAACTTCACGTTCTACATGAGACGGTTCAGCATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCTAAATATAGACAACTTCATTAGACATTAGAAAGAGGCCAAAACACCAGAATACTTGGATCACTAATATAAGAGAATATGCATATACCAGTGG 17062896 17063115 TCCATCATCCGGCCTATAAG TCCATCATCCGGCCTATAAG |||||||||||||||||||| ==================== 20 0 0 0