# [ GGGenome | 2026-03-04 22:59:27 ] # database: DDBJ release 139.0 (Sep, 2025) # query: GAACTAGCCACATGATGCAC # count: 17 # query: GTGCATCATGTGGCTAGTTC # count: 7 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins BQ411825|BQ411825.1 GA__Ed0043B08r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0043B08r, mRNA sequence. + 92 111 TTTTTTTTTTTTTTTTTTAAAATCAAACATACAATTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACTTTCTTACAACGACGCCCATTTTTTGCAA 1 211 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 DT048771|DT048771.1 COT_DE_F08 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to unknown, mRNA sequence. + 68 87 ATCAACATACCCTTTATCATTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCACATTTTTTGCAAACTAATGC 1 187 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 DT048773|DT048773.1 COT_DE_F10 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (AY138252) phospholipase D delta isoform 1a [Gossypium hirsutum], mRNA sequence. + 95 114 TTTTTTTTTTTTTTGCAGAGTAAAATCAAACATACCCTTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCACATTTTTTGCAAACTAATGC 1 214 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 CP106707|CP106707.1 Gossypium herbaceum isolate GPA1alz chromosome 2. + 283850 283869 CACAATGAAGAAATGGATGGCAAGAGTAAAATCAAACATACCCTTTATTCATTTGGTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATACATACATACATACATACATACATACAACGACGCACATTTTTTGCAAACTAATGC 283750 283969 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 HQ527784|HQ527784.1 Gossypium herbaceum clone NBRI_C_EYT27PB01APF00 simple sequence repeat marker, mRNA sequence. + 95 114 TTTTTTTTTTTTTTTAAAAATTTACAAACATACCCTTTATTTCATTTGGTTTATGTTCAAGCTCTAAGAATCTGCAATCACATTGATGCCAACTGAACTAGCCACATGATGCACACTTCACACACATGTACACACTTGCACAGACATACATACATACATTACATACATACATACATACATACAACGACGCACATTTTTTGCAAACTAATGCCTC 1 214 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 639914868 639914887 CAGTAGAAAGTAGTATACAAGTAATATTGGATGATGTAATTCACTCGTTAAGAGTGCAAGCATGAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACAACATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 639914768 639914987 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 640017085 640017104 AAATAGGAAGTAGTATACAAGTAATATTGGATGATGCAATTCACTCGTTAAGAGTGCAAGCATTAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACATCATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 640016985 640017204 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 640578520 640578539 CAATATAAAGTAGTATACAAGTAATATTGGATGATGTAATTCACTCGTTAAGAGTGCAAGCATGAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACAACATCTCCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 640578420 640578639 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 640670837 640670856 AAATAGGAAGTAGTATACAAGTAATATTGGATGATGCAATTCACTCGTTAAGAGTGCAAGCATTAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACATCATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 640670737 640670956 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 641243428 641243447 CAATATAAAGTAGTATACAAGTAATATTGGATGATGTAATTCACTCGTTAAGAGTGCAAGCATGAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACAACATCTCCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 641243328 641243547 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 641304240 641304259 AAATAGGAAGTAGTATACAAGTAATATTGGATGATGCAATTCACTCGTTAAGAGTGCAAGCATTAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACATCATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 641304140 641304359 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 641886804 641886823 CAATATAAAGTAGTATACAAGTAATATTGGATGATGTAATTCACTCGTTAAGAGTGCAAGCATGAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACAACATCTCCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 641886704 641886923 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 641979146 641979165 AAATAGGAAGTAGTATACAAGTAATATTGGATGATGCAATTCACTCGTTAAGAGTGCAAGCATTAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACATCATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 641979046 641979265 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 642550185 642550204 CAATATAAAGTAGTATACAAGTAATATTGGATGATGTAATTCACTCGTTAAGAGTGCAAGCATGAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACAACATCTCCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 642550085 642550304 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 642642527 642642546 AAATAGGAAGTAGTATACAAGTAATATTGGATGATGCAATTCACTCGTTAAGAGTGCAAGCATTAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACATCATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 642642427 642642646 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 643209687 643209706 CAATATAAAGTAGTATACAAGTAATATTGGATGATGTAATTCACTCGTTAAGAGTGCAAGCATGAATAAGTACACTCATTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACAACATCTCCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAATTCACACAATGAGAG 643209587 643209806 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 OX371846|OX371846.1 Avena sterilis genome assembly, chromosome: 2C. + 643304965 643304984 AAATAGGAAGTAGTATACAAGTAATATTGGATGATGCAATTCACTCGTTAAGAGTGCAAGCATTAATAAGTACACTCGTTTAAATATAAGTTGACTTTATGAACTAGCCACATGATGCACATCATCACCACACCGTATGAATTTTGACGACATTGACATACTTAAGTTATAGGCCCCTTGCCACAAGATTCAAATCCAAATCCAAATCCAATTCACACAA 643304865 643305084 GAACTAGCCACATGATGCAC GAACTAGCCACATGATGCAC |||||||||||||||||||| ==================== 20 0 0 0 DN758637|DN758637.1 G.hir-stem 1141 PCR amplified cotton stem cDNA Gossypium hirsutum cDNA, mRNA sequence. - 511 530 AAAAAATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGATGTATGTAATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTT 411 602 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0 DW513770|DW513770.1 GH_TMIRS_176_A07_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence. - 251 270 TGTATCAATTGCAGATTTCTTCTGTTCTTAGTTCTTTGTTGAGGCATTAGTTTGCAAAAAATGTGCGTCGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAGGGGGGAGATCTCTCAT 151 342 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0 JG454731|JG454731.1 2P12-A3-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence. - 354 373 GCATTAGTTTGCAAAAAATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTTACTCTTG 254 453 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0 JK795586|JK795586.1 E04-54E04 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. - 593 612 TTGTTGAGGCATTAGTTTGCAAAAAATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTT 493 685 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0 CP106694|CP106694.1 Gossypium herbaceum isolate Zhongcao1 chromosome 2. - 94567693 94567712 TGAGGCATTAGTTTGCAAAAAATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTTACTCTTGCCATCCATTTCTTCATTGTG 94567593 94567812 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0 HQ527790|HQ527790.1 Gossypium herbaceum clone NBRI_A2_652 simple sequence repeat marker, mRNA sequence. - 377 396 GAGGCATTAGTTTGCAAAAAATGTGCGTCNGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTT 277 469 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0 HQ527791|HQ527791.1 Gossypium herbaceum clone NBRI_B_1426 simple sequence repeat marker, mRNA sequence. - 122 141 TGAGGCATTAGTTTGCAAAAAATGTGCGTCGTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTCTGTGCAAGTGTGTACATGTGTGTGAAGTGTGCATCATGTGGCTAGTTCAGTTGGCATCAATGTGATTGCAGATTCTTAGAGCTTGAACATAACCAAATGAATAAAGGGTATGTTTGATTTTAAAAAAAAAAAAAAAACCGAC 22 235 GTGCATCATGTGGCTAGTTC GTGCATCATGTGGCTAGTTC |||||||||||||||||||| ==================== 20 0 0 0