# [ GGGenome | 2025-04-04 08:28:27 ] # database: DDBJ release 134.0 (Mar, 2024) # query: GAGTCCCTGTGGATGGTGTT # count: 4 # query: AACACCATCCACAGGGACTC # count: 25 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CP032582|CP032582.1 Gossypium turneri isolate D10-2 chromosome D10_12. + 42764379 42764398 GGTGTGGTAGGAGTCCCTGTTGTCGGTGTCCCCGTTGTTGGTGTGGTAGGGGTCCCTGTGGTTGGTGTTGGGGTAGGAGTCCCTGTGGTCGGTGTCGTCGGAGTCCCTGTGGATGGTGTTGTGCTTGTACCACTGTAAAATTAGCACAACATATACAATGTTAAAGATGCATAAATTTTTTTGTGAAATACCAGACAAAGAACATAAAAGAACAAAATAT 42764279 42764498 GAGTCCCTGTGGATGGTGTT GAGTCCCTGTGGATGGTGTT |||||||||||||||||||| ==================== 20 0 0 0 CP053561|CP053561.1 Gossypium arboreum cultivar Shixiya1 chromosome 12. + 74410446 74410465 GGAGTCCCTGTGGTTGGTGTTGTGGTAGGAGTCCCCGTGGTAGGTGTTGTTGGAGTCCCTGTAGTCGGAGTTGTCGGAGTCCCTGTACTCGGAGTTGTCGGAGTCCCTGTGGATGGTGTTGTGCTTGTGCCACTGTAAAATTTAGCACAACATATACAATGTTAAAGATGCATAAATTTTTTGGTGAAATACCAAACAAAGAACATAAAAGAACAAAATA 74410346 74410565 GAGTCCCTGTGGATGGTGTT GAGTCCCTGTGGATGGTGTT |||||||||||||||||||| ==================== 20 0 0 0 CP106705|CP106705.1 Gossypium herbaceum isolate GPA1alz chromosome 12. + 96177294 96177313 GGAGTCCCTGTGGTTGGTGTTGTGGTAGGAGTCCCTGTGGTAGGTGTTGTTGGAGTCCCTGTAGTAGGAGTTGTCGGAGTCCCTGTACTCGGAGTTGTCGGAGTCCCTGTGGATGGTGTTGTGCTTGTGCCACTGTAAAATTTAGCACAACATATACAATGTTAAAGATGCATAAATTTTTTGGTGAAATACCAAACAAAGAACATAAAAGAACAAAATA 96177194 96177413 GAGTCCCTGTGGATGGTGTT GAGTCCCTGTGGATGGTGTT |||||||||||||||||||| ==================== 20 0 0 0 CP106716|CP106716.1 Gossypium bickii isolate GPG1lz chromosome 12. + 99740326 99740345 GGTGTCCCCGTTGTTGGTGTGGTAGGAGTCCCTGTGGTTGGTGTTGTGGTAGGAGTCCCTGTGGTAGGTGTTGTTGGAGTCCCTGTAGTCGGACTTGTGGGAGTCCCTGTGGATGGTGTTGTGCTTGTGCCACTGTTAAATTTAGCACAACATATACAATGTTAAAGATGCAAAAAAAAAAAAAAAAAAAAATTTGTGAAATTCCAAACAAAGAACATAA 99740226 99740445 GAGTCCCTGTGGATGGTGTT GAGTCCCTGTGGATGGTGTT |||||||||||||||||||| ==================== 20 0 0 0 BG447196|BG447196.1 GA__Eb0041A15f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0041A15f, mRNA sequence. - 486 505 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAATACAGGGACTCCGACAACTCCGACTACAGGGACTCCAACAACACCTACCACGGGGACTCCTACCACAACACCAACCACAGGGACTCC 386 605 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 CO077019|CO077019.1 GR__Ea38J21.r GR__Ea Gossypium raimondii cDNA clone GR__Ea38J21 3', mRNA sequence. - 479 498 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 379 598 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 CO091718|CO091718.1 GR__Ea12F19.f GR__Ea Gossypium raimondii cDNA clone GR__Ea12F19 5', mRNA sequence. - 482 501 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 382 601 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 CO119076|CO119076.1 GR__Eb021M17.r GR__Eb Gossypium raimondii cDNA clone GR__Eb021M17 3', mRNA sequence. - 448 467 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 348 567 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 DR459497|DR459497.1 CM076H08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. - 427 446 CTCAAGGAAGCTGTGATATTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTACTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACAACTACCACAGGGACTCCTAACAAAAAAACAACCACAGGGACTCC 327 546 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 DT548915|DT548915.1 EST1059555 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. - 477 496 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 377 596 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 DT566154|DT566154.1 EST1076794 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. - 473 492 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 373 592 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES805324|ES805324.1 UFL_650_41 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 305 324 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 205 424 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES807990|ES807990.1 UFL_648_06 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 163 182 GCTCAAGGAAGCTGTGATTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 63 282 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES816496|ES816496.1 UFL_199_75 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 103 122 CACGAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 3 222 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES820514|ES820514.1 UFL_364_93 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 449 468 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 349 568 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES823631|ES823631.1 UFL_340_28 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 486 505 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 386 605 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES832073|ES832073.1 UFL_408_36 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 478 497 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 378 597 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES832823|ES832823.1 UFL_462_44 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 449 468 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 349 568 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 ES844332|ES844332.1 UFL_109_62 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. - 486 505 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 386 605 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 EV494404|EV494404.1 sg009F05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. - 148 167 CTCAATGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 48 267 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 EV494591|EV494591.1 sg018E06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. - 294 313 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 194 413 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 JK793741|JK793741.1 E12-083E12 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. - 488 507 TTTCCTTCCAGGTATGTTCACTGGAATCTGCCCACTTTGATGAAACTTACTTTGGGATTTTTCATGTTTTCAATTTATCATTCATCAATGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 388 607 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 JK793884|JK793884.1 A01-50A01 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. - 550 569 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 450 669 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 JZ383866|JZ383866.1 ndcxf0_0016_G02.ab1 Upland cotton seedling roots at salt stress 12h (ndcxf) Gossypium hirsutum cDNA 5', mRNA sequence. - 500 519 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGCGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTAC 400 559 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 JZ384163|JZ384163.1 ndcxf0_0020_B06.ab1 Upland cotton seedling roots at salt stress 12h (ndcxf) Gossypium hirsutum cDNA 5', mRNA sequence. - 500 519 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACA 400 536 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 JZ385415|JZ385415.1 ndcxf0_0037_F10.ab1 Upland cotton seedling roots at salt stress 12h (ndcxf) Gossypium hirsutum cDNA 5', mRNA sequence. - 492 511 CTCAAGGAAGCTGTGATTTTTCAGGCACTGCTACTGTTAGTGTTAATCCTCCTTCAAATATTCCCTCTACTTGCAGTTTTCCTTCCAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGA 392 523 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 CP032564|CP032564.1 Gossypium raimondii isolate D5-4 chromosome D5_12. - 11844693 11844712 ATATTTTGTTCTTTTATGTTCTTTTGTCTGGTATTTCACAAAAAAATTATGCATCTTTAACATTGTATATGTTGTGCTAATTTTACAGTGGTACAAGCACAACACCATCCACAGGGACTCCGACGACACCGACCACAGGGACGCCTACCTCAACACCAACCACAGGGACTCCTACCACACCAACAACGGGGACACCGACAACAGGGACTCCTACCACACC 11844593 11844812 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 CP106691|CP106691.1 Gossypium herbaceum isolate Zhongcao1 chromosome 12. - 13697491 13697510 TATTTTGTTCTTTTATGTTCTTTGTTTGGTATTTCACCAAAAAATTTATGCATCTTTAACATTGTATATGTTGTGCTAAATTTTACAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACTCCGAGTACAGGGACTCCGACAACTCCTACTACAGGGACTCCAACAACACCTACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCC 13697391 13697610 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0 CP106733|CP106733.1 Gossypium rotundifolium isolate GPK201 chromosome 12. - 8336010 8336029 TATTTTGTTCTTTTATGTTCTTTGTTTGGTATTTCACAAAAAAAATTATGCATCTTTAACATTGTATATGTTGTGCTAAATTTTACAGTGGCACAAGCACAACACCATCCACAGGGACTCCGACAACACCGACTACAGGGACTCCAACAACACCAACCACAGGGACTCCTACCACAACACCAACCACAGGGACTCCTACCACACCAACCACAGGGACTCC 8335910 8336129 AACACCATCCACAGGGACTC AACACCATCCACAGGGACTC |||||||||||||||||||| ==================== 20 0 0 0