# [ GGGenome | 2025-04-05 06:32:08 ] # database: DDBJ release 134.0 (Mar, 2024) # query: GCATGGCAACTCTTCTTAGCCCG # count: 30 # query: CGGGCTAAGAAGAGTTGCCATGC # count: 1 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins JC293910|JC293910.1 Sequence 16 from Patent WO2013111018. + 1720 1742 ATCATTTTTCTCTTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1620 1842 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 KH569199|KH569199.1 Sequence 16 from patent US 9574202. + 1720 1742 ATCATTTTTCTCTTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1620 1842 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 CB292664|CB292664.1 UCRCS01_04de01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04de01, mRNA sequence. + 46 68 GCACTATGCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCACCATCATCACATTCATTTTCTCTATGTCCATTAGGCCGCCAAAATGCATGTTCAA 1 168 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 CB293032|CB293032.1 UCRCS01_05bh01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05bh01, mRNA sequence. + 76 98 GCCCTATAGGGTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 198 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 CN182254|CN182254.1 UCRCS04_0002C17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002C17, mRNA sequence. + 125 147 ATCATTTTTCTCTTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 25 247 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 CX291776|CX291776.1 C04004G01SK FlavFr1 Citrus clementina cDNA clone C04004G01, mRNA sequence. + 89 111 TTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 211 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DN619014|DN619014.1 UCRCS11_03F12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003F12, mRNA sequence. + 104 126 ATCATTTTTCTCTTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 4 226 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DN959002|DN959002.1 USDA-FP/ARO_14832 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-18_G12 5', mRNA sequence. + 38 60 CCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 160 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY261268|DY261268.1 KN0AAP2YE20FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence. + 72 94 CTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 194 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY262926|DY262926.1 IC0AAA10BD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 67 89 TTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 189 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY263837|DY263837.1 IC0AAA12DE07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 20 42 CTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 142 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY266570|DY266570.1 IC0AAA1BC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 121 143 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 21 243 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY275216|DY275216.1 IC0AAA38DB11RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 76 98 ATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 198 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY276179|DY276179.1 IC0AAA40BG06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 121 143 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 21 243 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY290292|DY290292.1 IC0AAA75AA05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 16 38 TTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 138 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY291490|DY291490.1 IC0AAA78BB11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 144 166 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 44 266 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 DY298022|DY298022.1 IC0AAA94BF08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. + 40 62 CTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 162 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 EY695415|EY695415.1 CS00-C3-700-036-B10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence. + 234 256 ATCATTTTTCTCTTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 134 356 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC880599|FC880599.1 IC0AAA78BB11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78BB11, mRNA sequence. + 144 166 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 44 266 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC881349|FC881349.1 IC0AAA38DB11RM2 IVIA1 Citrus clementina cDNA clone IC0AAA38DB11, mRNA sequence. + 71 93 TCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 193 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC882711|FC882711.1 IC0AAA75AA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA75AA05, mRNA sequence. + 16 38 TTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 138 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC894322|FC894322.1 IC0AAA12DE07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12DE07, mRNA sequence. + 20 42 CTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 142 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC904495|FC904495.1 IC0AAA40BG06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA40BG06, mRNA sequence. + 121 143 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 21 243 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC906164|FC906164.1 IC0AAA1BC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1BC06, mRNA sequence. + 121 143 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 21 243 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC913173|FC913173.1 IC0AAA94BF08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94BF08, mRNA sequence. + 40 62 CTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 162 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC914684|FC914684.1 IC0AAA10BD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10BD07, mRNA sequence. + 67 89 TTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 189 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC926783|FC926783.1 KN0AAP2YE20FM1 TF Citrus clementina cDNA clone KN0AAP2YE20, mRNA sequence. + 72 94 CTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 194 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 FC931666|FC931666.1 C34107F09EF PostHarvP1 Citrus clementina cDNA clone C34107F09, mRNA sequence. + 17 39 ATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1 139 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 AF169241|AF169241.1 Citrus sinensis capsanthin/capsorubin synthase (CCS) gene, complete cds. + 1720 1742 ATCATTTTTCTCTTCTTCCTCTGAGATTCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGCGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 1620 1842 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 OY754322|OY754322.1 Citrus sinensis genome assembly, chromosome: 5. + 17219466 17219488 ATCATTTTTCTCTTCTTCCTCTGAGATCCCTCTGTTTCTTTTATCTCAATTATTGACTCCTCTCCACTTTCTTTTGTCTTTCTCATTTCTCTGTGCTCTGGCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTAGGCCGCCAAAATGCATGTTCAA 17219366 17219588 GCATGGCAACTCTTCTTAGCCCG GCATGGCAACTCTTCTTAGCCCG ||||||||||||||||||||||| ======================= 23 0 0 0 OY754322|OY754322.1 Citrus sinensis genome assembly, chromosome: 5. - 27616983 27617005 TTGAACATGCATTTTGGCGGCCTAATGGAAATAGGGAAAATGAAGGTGATGATGTTGAATCAATTATTTGCGAAACTTTAGCTAAAGGAGAAGGAGAAAACGGGCTAAGAAGAGTTGCCATGCCAGAGCGCAGAGAAATGAGAAAGACAAAAGAAAGTGGAGAGGAGTCAATAATTGAGATAAAAGAAACAGAGGAATCTCAGAGGAAGAAGAGAAAAATGAT 27616883 27617105 CGGGCTAAGAAGAGTTGCCATGC CGGGCTAAGAAGAGTTGCCATGC ||||||||||||||||||||||| ======================= 23 0 0 0