# [ GGGenome | 2025-04-05 18:32:50 ] # database: DDBJ release 134.0 (Mar, 2024) # query: GCGGCCATCCTTGTCTTCG # count: 19 # query: CGAAGACAAGGATGGCCGC # count: 12 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins DV685362|DV685362.1 CGN-26660 Leaf Coffea canephora cDNA clone cccl1f23 5', mRNA sequence. + 489 507 CTCCGCCTGGCTCCAAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCTTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGAGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 389 607 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV685439|DV685439.1 CGN-26757 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w17c4 5', mRNA sequence. + 57 75 GGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 1 175 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV687771|DV687771.1 CGN-29884 Leaf Coffea canephora cDNA clone cccl4c6 5', mRNA sequence. + 229 247 CTCCGCCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 129 347 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV688113|DV688113.1 CGN-30525 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w17c4 5', mRNA sequence. + 64 82 GCACCAGGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 1 182 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV689714|DV689714.1 CGN-32862 Leaf Coffea canephora cDNA clone cccl18e1 5', mRNA sequence. + 127 145 CTCCGTCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACTACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATGAAGAGGTGCCTATCACCGTCCTCCAATCATCTT 27 245 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV690042|DV690042.1 CGN-33298 Leaf Coffea canephora cDNA clone cccl18e14 5', mRNA sequence. + 361 379 CTCCGCCTGGCTCCAAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 261 479 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV692210|DV692210.1 CGN-36069 Leaf Coffea canephora cDNA clone cccl26c2 5', mRNA sequence. + 502 520 CTCCGCCTGGCTCCAAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCATAATTCCTCTTCCGGGGGGGAATGGCGGCCATCCTTGTCTTCGATTTGAGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 402 620 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV692367|DV692367.1 CGN-36273 Leaf Coffea canephora cDNA clone cccl16o1 5', mRNA sequence. + 160 178 CTCCGCCTGGCTCCAAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCATAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 60 278 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 DV712755|DV712755.1 CGN-61887 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30n16 5', mRNA sequence. + 501 519 CTCCGCCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 401 619 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GR986074|GR986074.1 TransId-86392 CACAT36L Coffea arabica cDNA clone CACAT36L_12_G02_023.F, mRNA sequence. + 491 509 CTCCGCCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAA 391 545 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GT647314|GT647314.1 CC00-XX-SH3-039-A11-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-039-A11-EM, mRNA sequence. + 194 212 CTCCGCCTAGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 94 312 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GW435315|GW435315.1 CA00-XX-IC1-028-C04-EC.F Coffea arabica IC1 Coffea arabica cDNA clone CA00-XX-IC1-028-C04-EC, mRNA sequence. + 479 497 CTCCGCCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCA 379 565 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GW440861|GW440861.1 CA00-XX-SH2-061-B08-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-061-B08-EM, mRNA sequence. + 467 485 CTCCGCCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 367 585 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GW441504|GW441504.1 CA00-XX-SH2-024-H12-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-024-H12-EM, mRNA sequence. + 135 153 CACCGCCTGGCTCCGAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATGATCATCAAGAGGTGCCTATCACCGTCGTCCAATCATCAT 35 253 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GF110685|GF110685.1 CCES34 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site. + 497 515 CTCCGCCTGGCTCCAAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 397 615 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 GF110686|GF110686.1 CCES35 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site. + 497 515 CTCCGCCTGGCTCCAAAACATGCGGGATCAGAGGGCGGAAGCGAGGCAGGGCGACGGGGACGGGAAGGTCTGGTCGTAATTCCTCTTCCGGCGGGGAATGGCGGCCATCCTTGTCTTCGATTTGTGAAGACAACGTTTTACATGAGAGGAACAAAATTGATCATCATCGTCATCATCATAATCATCAAGAGGTGCCTATCACCGTCCTCCAATCATCAT 397 615 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 CP126002|CP126002.1 Bradyrhizobium elkanii strain K02K-Be chromosome, complete genome. + 236236 236254 TCGGCACGCTGACGCCGGCATAGGGATCGTTGCAGAGGTCGGCGACCTTGCGCGGACCGTATCGGTAATACGCGCCGAGGCCCGCCCGCGAATCGTAGAGGCGGCCATCCTTGTCTTCGGAGGACTTGATTGATTTGATCGCATCGGGGTCGGCGGCCGGTGCGCTCTTGAATGCGAGGCCGCGCTTGACGGCTTCGTCGACCAGCCAGGCCAGCGGCA 236136 236354 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 CP126029|CP126029.1 Bradyrhizobium elkanii strain K03D-Be chromosome, complete genome. + 238329 238347 CCGGCACGCTGACGCCGGCATAGGGATCGTTGCAGAGGTCGGCGACCTTGCGCGGACCGTACCGGTAATACGCGCCGAGGCCCGCCCGCGAATCGTAGAGGCGGCCATCCTTGTCTTCGGAGGATTTGATCGACTTGATCGCATCGGGATCGGCAATCGGTGCGCTCTTGAATGCGAGGCCGCGCTTGACGGCTTCGTCGACCAGCCAGGCCAGCGGCA 238229 238447 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 OX336389|OX336389.2 Meconema thalassinum genome assembly, chromosome: X. + 156295153 156295171 ACTTGTATCGTCCGTGTGCATTTAACCTTGGTCGTCTTTGTCGGGCTGAACTATGCTGCTGTTGCTTTTGTTGGCCGATTAGATGGTCCCGGTCATATTGGCGGCCATCCTTGTCTTCGGAACGTGTTGATTAATTTCTAAGATTCCTCTCCTTTGTGGGTGTGCCTGTCTTTGCTCCAGTACTTTCCAGTTGACTCTGTCTCTGCAAAATGTTCAGCA 156295053 156295271 GCGGCCATCCTTGTCTTCG GCGGCCATCCTTGTCTTCG ||||||||||||||||||| =================== 19 0 0 0 OY759870|OY759870.1 uncultured Cohaesibacter sp. isolate c11f5eba-291c-42f9-ba67-a1d324372fbb genome assembly, chromosome: 22. - 156924 156942 TTGCACAAAGAGGCGTGCCTCAGACCCCGAACGATCTGACGGAGCACGAATGCATAAATCTTCGGCTCTCGACCCACGGCGCGCTCTATGCGTGGGAATTCGAAGACAAGGATGGCCGCGAACTCCGCGTCAAGGTTCAGGGGCAGGTGTGTTTCGACACGGTCATGCCGATCCATCGCGCCATTCGCGATGGTCAGGGGCTTGCCCTGTTGCCGGAAA 156824 157042 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP059663|CP059663.1 Rhizoctonia solani strain AG-1 IA isolate XN chromosome 6. - 1017704 1017722 AGGTCCTCGTTTCCCAAATCTGGAACGCGATCATCATCTCCATGTACCGCGAGCATTTGCTTTCGATAGATCATGTCCAGCAGCTCATGTACCACCAAGCCGAAGACAAGGATGGCCGCAAGACCCTCCGCGCGCCGTTGTTTTTCACCGCCCAAGGGACACGCGAATTCCTTCCTCCCGGTTCCGAAGCTGAACGCCGTATTTCGTTCTTTGCTCAGT 1017604 1017822 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP102648|CP102648.1 Rhizoctonia solani strain AG1-IA_HG81 chromosome 6. - 1143963 1143981 AGGTCCTCGTTTCCCAAATCTGGAACGCGATCATCATCTCCATGTACCGCGAGCATTTGCTTTCGATAGATCATGTCCAGCAGCTCATGTACCACCAAGCCGAAGACAAGGATGGCCGCAAGACCCTCCGCGCGCCGTTGTTTTTCACCGCCCAAGGGACACGCGAATTCCTTCCTCCCGGTTCCGAAGCTGAACGCCGTATTTCGTTCTTTGCTCAGT 1143863 1144081 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP108140|CP108140.1 Streptomyces sp. NBC_00180 strain NBC 00180 chromosome, complete genome. - 8973694 8973712 CGCGCCAGCAATCGCGCCGACAGAGCCGAACAGGCAGCGGTCCGTGCTGTGGTGATGGCCGTACCGTCCAACAGCGCGGCAGGCGCGCCCGTGGCCGAATCGAAGACAAGGATGGCCGCTTGATGGGTCGGCAATGGAGTCCCGGCATTGCGCGGGAAGAGAGAGACCAACTTGGCCATGAGCACATCGGCCGATGGCACATAGCCCGGCATGGCGGCC 8973594 8973812 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP108683|CP108683.1 Streptomyces sp. NBC_01017 chromosome, complete genome. - 10287345 10287363 CGCGCCAGCAATCGGGCCGACAGAGCGGAACAGGCAGCGGTCCGTGCTGCGGTGATGGCCGTACCGTCAAGCAGCGCGGCAGGCGCACCGGTGGCCGAATCGAAGACAAGGATGGCCGCTTGATGGGTCGGCAGTGGAGTTCCGGAATTCCGCGGGAAGAGGGACACCAACTTGGCCATGAGCACATCGGCCGATGGCACGTAGCCCGGCATGGCGGCC 10287245 10287463 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP109302|CP109302.1 Streptomyces sp. NBC 01614 strain NBC_01614 chromosome, complete genome. - 10325771 10325789 CGCGCCAGCAATCGCGCCGACAGAGCCGAACAGGCAGCGGTCCGTGCTGTGGTGATGGCCGTACCGTCCAACAGCGCGGCAGGCGCGCCCGTGGCCGAATCGAAGACAAGGATGGCCGCTTGATGGGTCGGCAATGGAGTCCCGGCATTGCGCGGGAAGAGAGAGACCAACTTGGCCATGAGCACATCGGCCGATGGCACATAGCCCGGCATGGCGGCC 10325671 10325889 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP121667|CP121667.1 Bradyrhizobium pachyrhizi strain CB1923 chromosome, complete genome. - 8622333 8622351 TGCCGCTGGCCTGGCTGGTCGACGAAGCCGTCAAGCGCGGCCTCGCATTCAAGAGCGCACCGATCGCCGACCCTGACGCGATCAAGTCAATCAAGTCCTCCGAAGACAAGGATGGCCGCCTCTACGATTCGCGGGCGGGCCTCGGCGCGTACTACCGGTACGGTCCACGCAAGGTCGCCGACCTCTGCAACGATCCCTATGCCGGCGTCAGCGTGCCGA 8622233 8622451 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP126003|CP126003.1 Bradyrhizobium elkanii strain K03I-Be chromosome, complete genome. - 9014511 9014529 TGCCGCTGGCCTGGCTGGTCGACGAAGCCGTCAAGCGCGGCCTCGCATTCAAGAGCGCACCGGCCGCCGACCCCGATGCGATCAAATCAATCAAGTCCTCCGAAGACAAGGATGGCCGCCTCTACGATTCGCGGGCGGGCCTCGGCGCGTATTACCGATACGGTCCGCGCAAGGTCGCCGACCTCTGCAACGATCCCTATGCCGGCGTCAGCGTGCCGA 9014411 9014629 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP126007|CP126007.1 Bradyrhizobium elkanii USDA 94 chromosome, complete genome. - 9246444 9246462 TGCCGCTGGCCTGGCTGGTCGACGAAGCCGTCAAGCGCGGCCTCGCATTCAAGAGCGCACCGATTGCCGATCCCGATGCGATCAAGTCGATCAAATCCTCCGAAGACAAGGATGGCCGCCTCTACGATTCGCGGGCGGGCCTCGGCGCGTATTACCGGTACGGTCCGCGCAAGGTCGCCGACCTCTGCAACGATCCCTATGCCGGCGTCAGCGTGCCGG 9246344 9246562 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP126036|CP126036.1 Bradyrhizobium elkanii strain S15H-Be chromosome, complete genome. - 9475648 9475666 TGCCGCTGGCCTGGCTGGTCGACGAGGCCGTCAAGCGCGGCCTCGCATTCAAGAGCGCACCGATTGCCGATCCCGATGCGATCAAGTCGATCAAATCCTCCGAAGACAAGGATGGCCGCCTCTACGATTCACGGGCGGGTCTCGGCGCGTATTACCGGTACGGTCCGCGCAAGGTTGCCGACCTCTGCAACGATCCCTATGCCGGCGTCAGCGTGCCGA 9475548 9475766 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 CP140900|CP140900.1 Sinorhizobium medicae strain ml42 chromosome, complete genome. - 872244 872262 GCCACCGGCGTCATCATGGCGCCGCCGACGCCCTGCAAAAAGCGTGAGAGGACGAAGGCGGAGAGGCTGTCCGCGACCGCGCAGAAGACCGAGCCTGCGACGAAGACAAGGATGGCCGCGCGGAAGATGCGTTTGGCGCCGAACCGATCCGCCATCCAGCCGCTCAAGGGAATGAAGATCGCGAGCGCCACCATATAGGAGGTGAGCGCGAGCTTGAGC 872144 872362 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0 LT960614|LT960614.1 Hartmannibacter diazotrophicus strain E19T genome assembly, chromosome: 1. - 4753963 4753981 GCGTAGCCGACGGGCGAGACCGAAATACCGCCGAGGAAGGACGTCACCTGGTCCGCCTCCGGAATGCCCGCCGCCGAGCGCGTGGCCCAGTCCGCCAGCGCGAAGACAAGGATGGCCGCGCCGCCGCCGATGGCCGCGCCCTTGATGCCGAGCAGCAGGAAATGGCGCTGGAACTCGCGGGCGATGAACCCCGCCTCGGCGCCGACGAAATGCAGGACG 4753863 4754081 CGAAGACAAGGATGGCCGC CGAAGACAAGGATGGCCGC ||||||||||||||||||| =================== 19 0 0 0