# [ GGGenome | 2025-04-05 02:40:38 ] # database: DDBJ release 134.0 (Mar, 2024) # query: GCGTTTCGTCCTCTTCTCAC # count: 10 # query: GTGAGAAGAGGACGAAACGC # count: 14 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins DX034359|DX034359.1 KBrB032C14F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB032C14, genomic survey sequence. + 295 314 AATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTTATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGAAGGTAGAAAAGACCAGGAAGA 195 414 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 ED537270|ED537270.1 KBrB130H03R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB130H03, genomic survey sequence. + 288 307 AATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTTATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGAAGGTAGAAAAGACCAGGAAGA 188 407 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 AC241164|AC241164.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH095B11, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces. + 63234 63253 AATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTTATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGAAGGTAGAAAAGACCAGGAAGA 63134 63353 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 CP123878|CP123878.1 Brassica napus cultivar Xiang5A chromosome 3. + 9981614 9981633 ATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTGATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGAAGGTAGAAAAGACCAGGAAGATA 9981514 9981733 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 HG994357|HG994357.1 Brassica napus genome assembly, chromosome: A03. + 9958473 9958492 AATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTGATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAACGAGAGCTTGAAGGTAGAAAAGACCAGGAAGATAGGCG 9958373 9958592 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 HG994367|HG994367.1 Brassica napus genome assembly, chromosome: C03. + 13974184 13974203 CGTAACCTAATTCGCCTTCTCTCGAGAAGAAGAAGAAGAAGTACCGATTCGAATTAAATGAAAAAATAGAAAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTTGATTATATACAAATGGGAGAGAGAGAGAGAGCTTGAAGGTAGAAAAGACCAGGAAGATAGGCGAAAAGGAAGATGAAGCGAAGG 13974084 13974303 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 LR031572|LR031572.1 Brassica rapa genome, scaffold: A03. + 9815569 9815588 AATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTGATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAGAACGAGAGCTTGAAGGTAGAAAAGACCAGGAAGATAGG 9815469 9815688 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 LR031872|LR031872.1 Brassica oleracea HDEM genome, scaffold: C3. + 14036975 14036994 TCGTAACCTAATTCGCCTTCTCTCTCGAGAAGAAGAAGAAGTACCGATTCGAATTAAATGAAAAAATAGAAAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTTGATTATATACAAATGGGAGAGAGAGAGAGAGCTTGAAGGTAGAAAAGACCAGGAAGATAGGCGAAAAGGAAGATGAAGCGAAGG 14036875 14037094 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 LS974619|LS974619.2 Brassica rapa genome assembly, chromosome: A03. + 9938197 9938216 AATCGAGAGCCAACGAAGAAGAAGCTTGGCGAAAATTTAAACGATTCGAATAAAATGGAAAAATAGAAAGGAGGTTGAATTGACTCTCGGCACAGAAAACGCGTTTCGTCCTCTTCTCACGAGTCTTGTGTGATTGATTGATTGTTTATATACAAATGGTAGAGAGAGAGAGAGAGAGAGAGAACGAGAGCTTGAAGGTAGAAAAGACCAGGAAGATAGG 9938097 9938316 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 OX104129|OX104129.1 Heterobilharzia americana genome assembly, chromosome: 3. + 46905003 46905022 TGAACTTGTTAGTTTTCACCTGCAGATCTTCAAGTTTGTGTGACATCAGACACAAGTCATAGGTGAAATCCAAACCTCCTTGATTCTTTTCCCCGATCCAGCGTTTCGTCCTCTTCTCACAGCTCCTCACTGTTTGTTGCATGATCCAGTCCGCCACAGTCAGGAAGATCATGCGTGGTGATAGTGGGCAGCTTTGTTTTACTCCTATCACCTGTATTCA 46904903 46905122 GCGTTTCGTCCTCTTCTCAC GCGTTTCGTCCTCTTCTCAC |||||||||||||||||||| ==================== 20 0 0 0 CX192734|CX192734.1 40-E022825-021-016-O10-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022O1016Q, mRNA sequence. - 62 81 TTTCTACCCTCAAGCTCTCTCTCTCTCTCCCATTTGTATATAATCAAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTTTCTATTTTTTCATTTAATTCGAATCGGTACTTCTTCTTCTTCTTCTCGAGAGAGAAGGCGAATTAGGTTA 1 181 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 DY021570|DY021570.1 63JKCOT5_T3_020_B02_22JAN2005_014 63JKCOT5 Brassica napus cDNA 5', mRNA sequence. - 368 387 TCCGCCTATCTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTACGATTTGTATATAAACAATCAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTTCCATTTAATTCGAATCGTTTAAATTTCACCAAACTTCTTCTTCTCCTCGAGAGAAGG 268 487 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 DY025503|DY025503.1 53COT2_T3_016_F12_03SEP2004_086 Brassica napus 36hr germinating seed library 53COT2 Brassica napus cDNA 5', mRNA sequence. - 88 107 CGGCACGAGGCTACCTTCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTACGATTTGTATATAAACAATCAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTTCCATTTAATTCGAATCGTTTAAATTTCACCAAACTTCTTCTTCTCCTCGAGAGAAGG 1 207 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 ES985446|ES985446.1 44JK5DM_UP_040_C02_01JUL2006_012 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence. - 76 95 GATCTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCCCATTTGTATATAATCAAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTTTCTATTTTTTCATTTAATTCGAATCGGTACTTCTTCTTCTTCTTCTCGAGAGAAGGCGAATTAGGTTACG 1 195 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 EX044070|EX044070.1 BR028714 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-126G06 5', mRNA sequence. - 46 65 TCTCTACCATTTGTATATAAACAATAAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTCCATTTTATTCGAATCGTTTAAATTTTCGCCAAGCTTCTTCTTCGTTGGCTCTCGATT 1 165 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 EX099075|EX099075.1 BR085365 root cDNA library KFRT Brassica rapa subsp. pekinensis cDNA clone KFRT-013C09 5', mRNA sequence. - 100 119 CTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCATTTGTATATAAACAATAAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTCCATTTTATTCGAATCGTTTAAATTTTCGCCAAGCTTCTTCTTCGTTGGCTCTCGATT 1 219 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 GR456005|GR456005.1 BNAPO3GH_T3_003_C01_13JULY2007_011 BNAPO3GH Brassica napus cDNA 5', mRNA sequence. - 12 31 ACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTTCCATTTAATTCGAATCGTTTAAATTTCACCAAACTTCTTCTTCTCCTCGAGAGAAGG 1 131 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 FX703617|FX703617.1 TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_20861. - 100 119 CTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCATTTGTATATAAACAATAAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTCCATTTTATTCGAATCGTTTAAATTTTCGCCAAGCTTCTTCTTCGTTGGCTCTCGATT 1 219 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 FX739256|FX739256.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_31052. - 98 117 CTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCATTTGTATATAAACAATAAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTCCATTTTATTCGAATCGTTTAAATTTTCGCCAAGCTTCTTCTTCGTTGGCTCTCGATT 1 217 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 AC189306|AC189306.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB032C14, complete sequence. - 104638 104657 TCTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCATTTGTATATAAACAATAAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTCCTTTCTATTTTTCCATTTTATTCGAATCGTTTAAATTTTCGCCAAGCTTCTTCTTCGTTGGCTCTCGATT 104538 104757 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 CP123893|CP123893.1 Brassica napus cultivar Xiang5A chromosome 18. - 65341686 65341705 CCTTCGCTTCATCTTCCTTTTCGCCTATCTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCCCATTTGTATATAATCAAATCACACAAGACTCGTGAGAAGAGGACGAAACGCGTTTTCTGTGCCGAGAGTCAATTCAACCTTTCTATTTTTTCATTTAATTCGAATCGGTACTTCTTCTTCTTCTTCTCGAGAGAAGGCGAATTAGGTTACG 65341586 65341805 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 JX131202|JX131202.1 Brassica napus microsatellite Y5F115-1 sequence. - 109 128 CTTGGCTTCATCTTCCTTTTCGCCTATCTTCCTGGTCTTTTCTACCTTCAAGCTCTCTCTCTCTCTCTACCATTTGTATATAATCAATCACACAAGACTCGTGAGAAGAGGACGAAACGC 9 128 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 OX645060|OX645060.1 Eumerus sabulonum genome assembly, chromosome: 1. - 10359409 10359428 GCGCTTTAGACAGTAATGGCATTTAGTGATTTATTATCTGTACTTTTAGCTTTTTAATATTTATTTCTAATTTATTTCTGGACTTTGTTTGGCTTTTATTGTGAGAAGAGGACGAAACGCAGGATATTCGAATGGCGGAAACTGTTTAACGTCGTGCTCGGTGACAGATTAATTGGAGTACCGGAAACTACACGGTTTTATGTTTAGTTTGACACATTCT 10359309 10359528 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0 OY292313|OY292313.1 Sisyra nigra genome assembly, chromosome: 1. - 3663173 3663192 TCGAAAGTCCTTCACGTTGAATTGAAAAAACTAGAGAATAGTTCTTGGTGATGGCATGGCGTGGCGCTAGTCTCGATACGATCTGTCTCTTGAGAAACGCGTGAGAAGAGGACGAAACGCGAGAATTAACGCCGTGTAGTTTGCGGGGCGAACAATACAAGAACATTTTTCCAATCAAAACTAGTTAATTAATCGAATTTTCACTTGAACAAGTGTCAAG 3663073 3663292 GTGAGAAGAGGACGAAACGC GTGAGAAGAGGACGAAACGC |||||||||||||||||||| ==================== 20 0 0 0