# [ GGGenome | 2025-04-05 10:40:13 ] # database,"DDBJ release 134.0 (Mar, 2024)" # query,GCTGTAGGGCTCTCTACTCG # count,6 # query,CGAGTAGAGAGCCCTACAGC # count,20 # name,strand,start,end,snippet,snippet_pos,snippet_end,query,sbjct,align,edit,match,mis,del,ins "AC243106|AC243106.1 Gossypium raimondii clone GR__Ba0005I14-jfn, complete sequence.",+,69528,69547,"TGATGGGCTTGTACACAGCTGTTCCGTCAGCCCGAAAGGCTAAACGCATGTTCTGTATCGCCGGTTGTGACGCCACCGGACTCTTCTGTTGCATGCCCAAGCTGTAGGGCTCTCTACTCGCCATCATTCCCGTCTCAGATCCCGACATTCTTCTCCTTTTCTGTTTGGTGTTTAAAATTGAATTATATATGCTTTTTCAGTTCTTTCCTTTGCTCGTACC",69428,69647,"GCTGTAGGGCTCTCTACTCG","GCTGTAGGGCTCTCTACTCG","||||||||||||||||||||","====================",20,0,0,0 "AC243164|AC243164.1 Gossypium hirsutum clone MX177F15-jon, complete sequence.",+,77717,77736,"TGATGGGCTTGTACACAGCTGTTCCGTCAGCCCTAAAGGCTAAACGCATGTTCTGTATCGCCGGTTGTGACGCCACCGGACTCTTCTGTTGCATGCCCAAGCTGTAGGGCTCTCTACTCGCCATCATTCCCGTCTCAGATCCCGACATTCTTCTCCTTTTTCTGTTTGGTGTTTAAAATTGAATTATATATGCTTTTTCAGTTCTTTCCTTTGCTCATAC",77617,77836,"GCTGTAGGGCTCTCTACTCG","GCTGTAGGGCTCTCTACTCG","||||||||||||||||||||","====================",20,0,0,0 "CP032571|CP032571.1 Gossypium turneri isolate D10-2 chromosome D10_01.",+,46074852,46074871,"TGATGGGCTTGTACACAGCTGTTCCGTCAGCCCTAAAGGCTAAACGCATGTTCTGTATCGCCGGTTGTGACGCCACCGGACTCTTCTGTTGGATGCCCAAGCTGTAGGGCTCTCTACTCGCCATCATTCCCGTCTCAGATCCCGACATTCTTCTCCTTTTTCTGTTTGGTGTTTAAAATTGAATTATATATGCTTTTTCAGTTCTTTCCTTTGCTCGTAC",46074752,46074971,"GCTGTAGGGCTCTCTACTCG","GCTGTAGGGCTCTCTACTCG","||||||||||||||||||||","====================",20,0,0,0 "CP106687|CP106687.1 Gossypium herbaceum isolate Zhongcao1 chromosome 1.",+,105786333,105786352,"TGATGGGCTTGTACACAGCTGTTCCGTCAGACCTAAAGGCTAAACGCATGTTCTGTATCACCGGTTGTGACGCCACCGGACTCTTCTGTTGCATGCCCAAGCTGTAGGGCTCTCTACTCGCCATCATTCCCGTCTCAGATCCCGACATTCTTCTCCTTTTTCTGTTTGGTGTTTAAAATTGAATTATATATGCTTTTTCAGTTCTTTCCTTTGCTCGTAC",105786233,105786452,"GCTGTAGGGCTCTCTACTCG","GCTGTAGGGCTCTCTACTCG","||||||||||||||||||||","====================",20,0,0,0 "CP106722|CP106722.1 Gossypium rotundifolium isolate GPK201 chromosome 1.",+,164734209,164734228,"TGATGGGCTTGTACACAGCTGTTCCGTCAGCCCTAAAGGCTAAACGCATGTTCTGTATCACCGGTTGTGACGCCACCGGACTCTTCTGTTGCATGCCCAAGCTGTAGGGCTCTCTACTCGCCATCATTCCCGTCTCAGATCCTGACATTCTTCTCCTTTTTCTGTTTGGTGTATAAAATTGAATTATATATGCTTTTTCAGTGCTTTCCTTTGCTCGTAC",164734109,164734328,"GCTGTAGGGCTCTCTACTCG","GCTGTAGGGCTCTCTACTCG","||||||||||||||||||||","====================",20,0,0,0 "OY284465|OY284465.1 Theobroma cacao genome assembly, chromosome: 8.",+,19524258,19524277,"TGATGGGCTTGTACACAGCTGTTCCGTCAGCACTAAAGGCTAAACGCATGTTCTGTATCACCGGCTGTGACGCAACCGGACTCTTCTGTTGCATGCCCACGCTGTAGGGCTCTCTACTCGTCATCACTCCCGTCTCAGATCCCGACATTTTTTCTCTTTATCTGGTTGGTGTACTAAAATTCCATACGCCCCCCCAACTCTGCCCACCAACAAAAATTAA",19524158,19524377,"GCTGTAGGGCTCTCTACTCG","GCTGTAGGGCTCTCTACTCG","||||||||||||||||||||","====================",20,0,0,0 "GP491936|GP491936.1 Sequence 22933 from patent US 7557201.",-,132,151,"ATCCCTACGTTTTTTTTTTCTCATGCGTCTCTTAGTCTCTGAAAATTTCCTATTTATTGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",32,251,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "GY467956|GY467956.1 Sequence 15731 from patent US 8030546.",-,438,457,"GTATGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGCGATACAGAACATGCGTTTAGCCTTTAGGGCTGACGGAACAGCTGTGTACAAGCCCATCA",338,557,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "MO979109|MO979109.1 Sequence 15731 from patent US 10597667.",-,438,457,"GTATGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGCGATACAGAACATGCGTTTAGCCTTTAGGGCTGACGGAACAGCTGTGTACAAGCCCATCA",338,557,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "BQ404803|BQ404803.1 GA__Ed0075A07f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0075A07f, mRNA sequence.",-,95,114,"NCTTAGAACTGGAGACTCCCGCTTCTTGCGGTCGGCACTAGTGGTTCCAAACAATTCGCACGTTATATGTCGGGATCTGTANACGGGATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",1,214,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "DT557574|DT557574.1 EST1068214 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.",-,419,438,"GAACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",319,538,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "DT559024|DT559024.1 EST1069664 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.",-,438,457,"GTATGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGCGATACAGAACATGCGTTTAGCCTTTAGGGCTGACGGAACAGCTGTGTACAAGCCCATCA",338,557,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "ES793498|ES793498.1 UFL_534_06 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.",-,152,171,"ATCCCTACGTTTTTTTTTTCTCATCCGTCTCTTAGTCTCTGAAAATTTCCTATTTATTGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",52,271,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "ES814153|ES814153.1 UFL_174_95 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.",-,328,347,"GAACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",228,447,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "ES817979|ES817979.1 UFL_191_52 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.",-,220,239,"GAACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",120,339,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "JZ368595|JZ368595.1 ndcxa0_0003_E12.ab1 Upland cotton seedling roots at 48h control (ndcxa) Gossypium hirsutum cDNA 5', mRNA sequence.",-,107,126,"GAATTCCTTAGTTTTTTTTCTCATCCGTCTCTTAGTCTCTGAAATTTTCCTATTTATTGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGCGATACAGAACATGCGTTTAGCCTTTAGGGCTGACGGAACAGCTGTGTACAAGCCCATCA",7,226,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "JZ376576|JZ376576.1 ndcxc0_0033_B12.ab1 Upland cotton seedling roots at 0h control (ndcxc) Gossypium hirsutum cDNA 5', mRNA sequence.",-,231,250,"GAACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",131,350,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "AC243098|AC243098.1 Gossypium arboreum clone GM105F19-jnd, complete sequence.",-,76684,76703,"GTACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAAAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",76584,76803,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "CP032244|CP032244.1 Gossypioides kirkii chromosome KI_01.",-,8943403,8943422,"ATACGAGCAAAGGAAAGAACTGAAATAGCATATATAATTCAATTTTAGAACCCCAAACAGAAAAGGAGAAGAATGTCGGGATCTGAGACAGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGCGCTGACGGAACAGCTGTGTACAAGCCCATCA",8943303,8943522,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "CP032553|CP032553.1 Gossypium raimondii isolate D5-4 chromosome D5_01.",-,14136476,14136495,"GGTACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGCGATACAGAACATGCGTTTAGCCTTTCGGGCTGACGGAACAGCTGTGTACAAGCCCATCA",14136376,14136595,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "CP106699|CP106699.1 Gossypium herbaceum isolate GPA1alz chromosome 1.",-,19883298,19883317,"GTACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGAATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGTCTGACGGAACAGCTGTGTACAAGCCCATCA",19883198,19883417,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "CP106715|CP106715.1 Gossypium bickii isolate GPG1lz chromosome 1.",-,24146558,24146577,"GTACGAGCAAAGGAAAGAACTGAAAAAGCATATATAATTCAATTTTAAACACCAAACAGAAAAAGGAGAAGTATGTCGGGATCTGAGACGGGAATGATGGCGAGTAGAGAGCCCTACAGCTTGGGCATGCAACAGAAGAGTCCGGTGGCGTCACAACCGGTGATACAGAACATGCGTTTAGCCTTTAGGGCTGACGGAACAGCTGTGTACAAGCCCATCA",24146458,24146677,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "CP139298|CP139298.1 Theobroma cacao isolate Sca6 chromosome 8.",-,4968122,4968141,"TTAATTTTTGTTGGTGGGCAGAGTTGGGGGGGCGTATGGAATTTTAGTACACCAACCAGATAAAGAGAAAAAATGTCGGGATCTGAGACGGGAGTGATGACGAGTAGAGAGCCCTACAGCGTGGGCATGCAACAGAAGAGTCCGGTTGCGTCACAGCCGGTGATACAGAACATGCGTTTAGCCTTTAGTGCTGACGGAACAGCTGTGTACAAGCCCATCA",4968022,4968241,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "LT594795|LT594795.1 Theobroma cacao genome assembly, chromosome: VIII.",-,4886046,4886065,"TTAATTTTTGTTGGTGGGCAGAGTTGGGGGGGCGTATGGAATTTTAGTACACCAACCAGATAAAGAGAAAAAATGTCGGGATCTGAGACGGGAGTGATGACGAGTAGAGAGCCCTACAGCGTGGGCATGCAACAGAAGAGTCCGGTTGCGTCACAGCCGGTGATACAGAACATGCGTTTAGCCTTTAGTGCTGACGGAACAGCTGTGTACAAGCCCATCA",4885946,4886165,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "OY284445|OY284445.1 Theobroma cacao genome assembly, chromosome: 8.",-,4988735,4988754,"TTAATTTTTGTTGGTGGGCAGAGTTGGGGGGGCGTATGGAATTTTAGTACACCAACCAGATAAAGAGAAAAAATGTCGGGATCTGAGACGGGAGTGATGACGAGTAGAGAGCCCTACAGCGTGGGCATGCAACAGAAGAGTCCGGTTGCGTCACAGCCGGTGATACAGAACATGCGTTTAGCCTTTAGTGCTGACGGAACAGCTGTGTACAAGCCCATCA",4988635,4988854,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0 "OY284455|OY284455.1 Theobroma cacao genome assembly, chromosome: 8.",-,4952216,4952235,"TTAATTTTTGTTGGTGGGCAGAGTTGGGGGGGCGTATGGAATTTTAGTACACCAACCAGATAAAGAGAAAAAATGTCGGGATCTGAGACGGGAGTGATGACGAGTAGAGAGCCCTACAGCGTGGGCATGCAACAGAAGAGTCCGGTTGCGTCACAGCCGGTGATACAGAACATGCGTTTAGCCTTTAGTGCTGACGGAACAGCTGTGTACAAGCCCATCA",4952116,4952335,"CGAGTAGAGAGCCCTACAGC","CGAGTAGAGAGCCCTACAGC","||||||||||||||||||||","====================",20,0,0,0