# [ GGGenome | 2025-03-14 21:40:51 ] # database: DDBJ release 134.0 (Mar, 2024) # query: GTGAAACGAGGTTGCTGCTCTA # count: 3 # query: TAGAGCAGCAACCTCGTTTCAC # count: 18 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins FY440085|FY440085.1 Raphanus sativus mRNA, clone: RSCR01K04, 5' end sequence. + 788 809 CATAAGCAAGAAGGCACTGGCTGCACAAGAAGCAGCTGCAGCTAACTCCGCGATTCCGGGGCAGGGAACTACGATTAACGTCGATGACACGTCTGGAGGCGTGAAACGAGGTTGCTGCTCTACCTAAACGAAAAGGTAATAATATATGTTTTCTGGCTTATCA 688 850 GTGAAACGAGGTTGCTGCTCTA GTGAAACGAGGTTGCTGCTCTA |||||||||||||||||||||| ====================== 22 0 0 0 LR778310|LR778310.1 Raphanus sativus genome assembly, chromosome: 1. + 46378787 46378808 CATAAGCAAGAAGGCACTGGCTGCACAAGAAGCAGCTGCAGCTAACTCCGCGATTCCGGGGCAGGGAACTACGATTAACGTCGATGACACGTCTGGTGGCGTGAAACGAGGTTGCTGCTCTACCTAAAACGGAAAAGGTAATAATATATGTTGTTTTCTGGCTTGCCAAGATTCAAAACTTTTGTTTTCATTGGCTTATTCCTTATCCCAAGATTCGAACTT 46378687 46378908 GTGAAACGAGGTTGCTGCTCTA GTGAAACGAGGTTGCTGCTCTA |||||||||||||||||||||| ====================== 22 0 0 0 OY743212|OY743212.1 Raphanus sativus genome assembly, chromosome: 6. + 46378787 46378808 CATAAGCAAGAAGGCACTGGCTGCACAAGAAGCAGCTGCAGCTAACTCCGCGATTCCGGGGCAGGGAACTACGATTAACGTCGATGACACGTCTGGTGGCGTGAAACGAGGTTGCTGCTCTACCTAAAACGGAAAAGGTAATAATATATGTTGTTTTCTGGCTTGCCAAGATTCAAAACTTTTGTTTTCATTGGCTTATTCCTTATCCCAAGATTCGAACTT 46378687 46378908 GTGAAACGAGGTTGCTGCTCTA GTGAAACGAGGTTGCTGCTCTA |||||||||||||||||||||| ====================== 22 0 0 0 EV571285|EV571285.1 RR4A728JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence. - 197 218 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCGTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATTGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 97 318 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EV573579|EV573579.1 RR4B305JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence. - 262 283 AAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACACCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATAGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 162 383 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EW721291|EW721291.1 RS1B145JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence. - 224 245 AATCTTGGGATAAGGGATAAGGAATAAGCCAATGAAGACAAAAGTTTTGAATCTTGGGAAGCCAGAAAACAACGTATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTATCATCGACGTTAATCGTAGTTCCCTGGCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 124 345 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EW730780|EW730780.1 RS2AS78JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence. - 221 242 AAGTTCGAATCTTGGGATAAGGAATAAGCCAATGAAAACAAAAGTTTTGAATCTTGGCAAGCCAAAAAACAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCACCAGACGTGTCATCGACGTTAATCGTGGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 121 342 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EX751144|EX751144.1 RR1BT15JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence. - 216 237 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCGTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 116 337 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EX768111|EX768111.1 RR3CB83JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence. - 234 255 AAGTTCGAATCTTGGGATAAGGAATAAGGCAATGAAAACAAAAGTTCTGAACCTCGGGAAGCCAGAAAACAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCACCAGACGTGTCATCGACGTTAATCGTAGTCCCCTGCCCCGGAATCGCCGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 134 355 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EX899204|EX899204.1 RS2BP61JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence. - 330 351 AAGTTCGAATCTTGGGATAAGGAATAAGCCAATGAAAACAAAAGTTTTGAATCTTGGCAAGCCAGAAAACAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCACCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 230 451 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EY893671|EY893671.1 RR1D739JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence. - 283 304 TGAGCCAAAAGTTGAAATGAAAGATGAGTCAATGAAAACAAAAGTTCGAATCTTGGGATAATAAGCCAGAGAACATATATTATTACCGTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTATCATCCACGTTAATCGTAGTTCCCTGGCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 183 404 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 EY911071|EY911071.1 RR3DR18JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence. - 218 239 AAGTTCGAATCTTGGGATAAGGAATAAGGCAATGAAAACAAAAGTTCTGAATCTCGGGAAGCCAGAAAACAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCACCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCCGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 118 339 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FD530687|FD530687.1 RR1FC21JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence. - 283 304 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCGTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 183 404 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FD531235|FD531235.1 RR1FK40JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence. - 259 280 TGAGCCAAAAGTTGAAATGAAAGATGAGTCAATGAAAACAAAAGTTCGAATCTTGGGATAATAAGCCAGAAAACGTATATTATTACCGTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTATCATCCACGTTAATCGTAGTTCCCTGGCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 159 380 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FD547257|FD547257.1 RR3FJ77JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence. - 281 302 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCGTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGATGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 181 402 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FD555033|FD555033.1 RR4FH94JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence. - 219 240 AAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACATTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 119 340 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FD950485|FD950485.1 RS3FU46JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence. - 239 260 AAGTTCGAATCTTGGGATAAGGAATAAGCCAATGAAAACAAAAGTTTTGAATCTTGGCAAGCCAGAAAACAACATATATTATTACCTTTTCCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCACCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 139 360 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FD961142|FD961142.1 RR1H094JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence. - 238 259 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATAATAAGCCAGAAAACATATATTATTACCATTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCGGCCGGTGCCTTCTTGCTTATG 138 359 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FX662143|FX662143.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_2650. - 318 339 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATGATAAGCCAGAAAACATATATTATTACCTTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 218 439 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 FX754068|FX754068.1 TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_4929. - 318 339 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATGATAAGCCAGAAAACATATATTATTACCTTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 218 439 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0 JT798950|JT798950.1 TSA: Raphanus sativus RS14403 mRNA sequence. - 247 268 AAAGTTCGAATCTTGGGATAAGGAATAAGCCAGAAAACAAAAGTTTTGAATCTTGGGATGATAAGCCAGAAAACATATATTATTACCTTTTCGTTTTAGGTAGAGCAGCAACCTCGTTTCACGCCTCCAGACGTGTCATCGACGTTAATCGTAGTTCCCTGCCCCGGAATCGCGGAGTTAGCTGCAGCTGCTTCTTGTGCAGCCAGTGCCTTCTTGCTTATG 147 368 TAGAGCAGCAACCTCGTTTCAC TAGAGCAGCAACCTCGTTTCAC |||||||||||||||||||||| ====================== 22 0 0 0