# [ GGGenome | 2025-04-05 17:45:02 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TCAGGCTTTTGTGCCCTAAG # count: 43 # query: CTTAGGGCACAAAAGCCTGA # count: 6 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins BG442345|BG442345.1 GA__Ea0017A10f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0017A10f, mRNA sequence. + 456 475 CAGCCACATAAACCGGGAGGCCCCGGCGGTCCTCCTGGAGGCGGTCCCCATCCTGGTGGCGGCATTTTTCTTTGCTCGTGCCGAATTCGGCACGAGCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 356 575 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 CO116714|CO116714.1 GR__Eb019B17.r GR__Eb Gossypium raimondii cDNA clone GR__Eb019B17 3', mRNA sequence. + 46 65 TTTCTCTACTTTCATCCAGGCGAGAGAGACAGAGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 165 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 CO122022|CO122022.1 GR__Eb03H12.f GR__Eb Gossypium raimondii cDNA clone GR__Eb03H12 5', mRNA sequence. + 30 49 CAGGCGAGAGAGAGAGAGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 149 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DN803875|DN803875.1 G.hir-8-10 DAA bolls drought stressed751 8-10 DAA cotton bolls from drought stressed plants Gossypium hirsutum cDNA, mRNA sequence. + 40 59 GCACGAGGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 159 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DR457278|DR457278.1 CM053F01 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 34 53 GAGAGAGAGAGAAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 153 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT545642|DT545642.1 EST1056282 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 52 71 GGCGAAAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 171 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT546719|DT546719.1 EST1057359 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 43 62 GCGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 162 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT546982|DT546982.1 EST1057622 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 67 86 CTACTTTCAATCCAAGGCGAAAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 186 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT546983|DT546983.1 EST1057623 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 67 86 CTACTTTCAATCCAAGGCGAAAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 186 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT547780|DT547780.1 EST1058420 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 15 34 TCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 134 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT547781|DT547781.1 EST1058421 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 15 34 TCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 134 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT555433|DT555433.1 EST1066073 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 25 44 GAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 144 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT559909|DT559909.1 EST1070549 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 77 96 AATCATTTCTCTACTTTCAATCCAAGGCGAAAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 196 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT564450|DT564450.1 EST1075090 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 55 74 TTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 174 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT566924|DT566924.1 EST1077564 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 16 35 ATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 135 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT567700|DT567700.1 EST1078340 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 42 61 CGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 161 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT567734|DT567734.1 EST1078374 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 55 74 TTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 174 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT569293|DT569293.1 EST1079933 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 61 80 TTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAGAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 180 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT569974|DT569974.1 EST1080614 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 45 64 GAAAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 164 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 DT571472|DT571472.1 EST1082112 GH_TMO Gossypium hirsutum cDNA, mRNA sequence. + 13 32 GAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGTTGCAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTC 1 132 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 ES799024|ES799024.1 UFL_505_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. + 35 54 GAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 154 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 ES832495|ES832495.1 UFL_340_53 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. + 56 75 GGCACGAGAAAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 175 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 ES850376|ES850376.1 UFL_692_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. + 25 44 GGCACGAGCTCGTGCCGCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 144 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 EV487790|EV487790.1 127D08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 27 46 GAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 146 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 EV498890|EV498890.1 sg152C05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 59 78 CAATCCAAGGGCGAAAGAAAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGTCTTCTCAGGCTTTTGTGCCCTAAGAATTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTCT 1 178 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 EX165154|EX165154.1 H11_P10_094 Cotton 1-14 day post anthesis Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 69 88 TGNNGNTCGNGCGCCTGCNGGNCGACACTAGTGGATCCAAAGAATTCGGCACGAGCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 188 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 GR713398|GR713398.1 EST006598 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 32-D23 5', mRNA sequence. + 64 83 CAGCGTCCGTTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 183 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JG453112|JG453112.1 1P6-7-H2-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence. + 16 35 ATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 135 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JG852555|JG852555.1 mhczaa0_003401.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_003401.z1, mRNA sequence. + 195 214 CCGGACATATGCCCGGGAATTCGGCCATTACGGCCGGGGAATCATTTCTCTACTTAAAGAAAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 95 314 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK790732|JK790732.1 A03-058A3 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 65 84 GAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTCCTCAGGCTTTTGTGCCCTAAGGGGGAATAGCCGCTTGCTGCATGTTTCAAGCAGATTTTGTTTTTGATTTACCACTTACGATCTACATACTGTATTATGAAGTTAAGACTTAATCGAAAAA 1 184 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK790845|JK790845.1 A01-089A1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 71 90 GGAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGTTGCAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAGGATTC 1 190 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK791227|JK791227.1 B04-36B04 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 96 115 GAATCAATCATTTCTCTACTTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 215 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK793253|JK793253.1 E11-77E11 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 96 115 GAATCAATCATTTCTCTACTTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 215 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK794365|JK794365.1 H01-071H1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 96 115 GAATCAATCATTTCTCTACTTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 215 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK794712|JK794712.1 F02-14-F02 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 100 119 CGGGGAATCAATCATTTCTCTACTTTCAATCCAACGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 219 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JK795066|JK795066.1 C03-083C3 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 96 115 GAATCAATCATTTCTCTACTTTCAATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 215 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JZ375803|JZ375803.1 ndcxc0_0023_D11.ab1 Upland cotton seedling roots at 0h control (ndcxc) Gossypium hirsutum cDNA 5', mRNA sequence. + 69 88 AATCCAAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAGGATTCTTGTTC 1 188 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JZ381567|JZ381567.1 ndcxe0_0024_E11.ab1 Upland cotton seedling roots at 3h control (ndcxe) Gossypium hirsutum cDNA 5', mRNA sequence. + 64 83 AAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAGGATTCTTGTTC 1 183 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JZ382139|JZ382139.1 ndcxe0_0031_C02.ab1 Upland cotton seedling roots at 3h control (ndcxe) Gossypium hirsutum cDNA 5', mRNA sequence. + 53 72 GAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTTTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAGGATTCTTGTTC 1 172 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JZ385120|JZ385120.1 ndcxf0_0032_F09.ab1 Upland cotton seedling roots at salt stress 12h (ndcxf) Gossypium hirsutum cDNA 5', mRNA sequence. + 68 87 GAGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAAGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 187 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 JZ386981|JZ386981.1 ndcxg0_0017_C05.ab1 Upland cotton seedling roots at 12h control (ndcxg) Gossypium hirsutum cDNA 5', mRNA sequence. + 41 60 GAGAGAGAGAGAGAGAGAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGAATTCTCACTTTTCTCGCTGTAAATAGGTGCAAAAGTCGGTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAGGATTCTTGTTC 1 160 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 CP032563|CP032563.1 Gossypium raimondii isolate D5-4 chromosome D5_11. + 2961996 2962015 AATTTAAATTAAAATAAATTAAAAAGCTCTCCTCAAAATCAACCAATCAATCATTTCTCTACTTTCAATCCAAGGCGAGAGAGAGAGAGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGGTAAATTTTTTGTTCCCCATTTGTTCTTCTGGGTCGATTCTCAAATTCTTGTTTGATCTCAGATTCTTTATATTTCCATTTTTTTTAATTTTTGGGGTTT 2961896 2962115 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 CP106686|CP106686.1 Gossypium herbaceum isolate Zhongcao1 chromosome 11. + 3061802 3061821 CTCCTCAAAATCAACCAATCAATCATTTCTCTACTTTCAATCCAAGGCGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATCGAGATCGCCTTCTCAGGCTTTTGTGCCCTAAGGTAAATTTTTTGTTCCCCATTTGTTCTTCTGGGTCGATTTTCAAATTCTTGTTTGATCTCAGATTCTTTATATTTCCATTTCTTTTTTATAATTTTTGGG 3061702 3061921 TCAGGCTTTTGTGCCCTAAG TCAGGCTTTTGTGCCCTAAG |||||||||||||||||||| ==================== 20 0 0 0 FG551397|FG551397.1 rmhcyb0_000365 SSH library of differentially expressed genes response to medium changes during cotton somatic embryogenesis Gossypium hirsutum cDNA clone rmhcyb0_000365, mRNA sequence. - 463 482 GAACAAGAATCCTCGAATGAAGGCTCTGAACCTCAGAAAGAACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCGAGAAAAGTGAGAATTCTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCACCTGCCCGGGCGGCCG 363 525 CTTAGGGCACAAAAGCCTGA CTTAGGGCACAAAAGCCTGA |||||||||||||||||||| ==================== 20 0 0 0 MW008618|MW008618.1 Gossypium hirsutum clone BAC Chr11_10_CM140_NAU1232 sequence, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces. - 47496 47515 CCCAAAAATTATAAAAAAGAAATGGAAATATAAAGAATCTGAGATCAAACAAGAATTTGAAAATCGACCCAGAAGAACAAATGGGGAACAAAAAATTTACCTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTTCGCCTTGGATTGAAAGTAGAGAAATGATTGATTGGTTGATTTTGAGGAGAGCT 47396 47615 CTTAGGGCACAAAAGCCTGA CTTAGGGCACAAAAGCCTGA |||||||||||||||||||| ==================== 20 0 0 0 CP032581|CP032581.1 Gossypium turneri isolate D10-2 chromosome D10_11. - 65661687 65661706 ACCCCAAAAATTATAAAAAAAATGGAAATATAAAGAATCTGAGATCAAACAAGAATTTGAGAATCGACCCAGAAGAACAAATGGGGAACAAAAAATTTACCTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCTTGGATTGAAAGTAGAGAAATGATTGATTGGTTGATTTTGAGGAGAGCTTTTT 65661587 65661806 CTTAGGGCACAAAAGCCTGA CTTAGGGCACAAAAGCCTGA |||||||||||||||||||| ==================== 20 0 0 0 CP106704|CP106704.1 Gossypium herbaceum isolate GPA1alz chromosome 11. - 123221121 123221140 CCCAAAAATTATAAAAAAGAAATGGAAATATAAAGAATCTGAGATCAAACAAGAATTTGAAAATCGACCCAGAAGAACAAATGGGGAACAAAAAATTTACCTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCGCCTTGGATTGAAAGTAGAGAAATGATTGATTGGTTGATTTTGAGGAG 123221021 123221240 CTTAGGGCACAAAAGCCTGA CTTAGGGCACAAAAGCCTGA |||||||||||||||||||| ==================== 20 0 0 0 CP106711|CP106711.1 Gossypium bickii isolate GPG1lz chromosome 11. - 131954620 131954639 TAACCCCAAAAATTAAAAAAAATGGAAATATAAAGAATCTGAGATCAAACAAGAATTTGAGAATCGACCCAGAATAACAAATGGGGAACAAAAAATTTACCTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTTTTTCTTTCGCCTTGGATTGAAAGTTGAGAAATGATTGATTGGTTGATTTT 131954520 131954739 CTTAGGGCACAAAAGCCTGA CTTAGGGCACAAAAGCCTGA |||||||||||||||||||| ==================== 20 0 0 0 CP106732|CP106732.1 Gossypium rotundifolium isolate GPK201 chromosome 11. - 1278500 1278519 AAACCCCAAAAATTATAAAAAAATGGAAATATAAAAAATCTGAGATCAAACAAGAATTTGAGAATCGACCCAGAAGAACAAATGGGACACAAAAATTTACCTTAGGGCACAAAAGCCTGAGAAGGCGATCTCGATCTCTCTCTCTCTCTCTCTCTCTTTTTCTTTCGCCTTGGATTAAAAGTGGAGAAATGATTGATTGGTTGATTTTGAGGAGAGCTTT 1278400 1278619 CTTAGGGCACAAAAGCCTGA CTTAGGGCACAAAAGCCTGA |||||||||||||||||||| ==================== 20 0 0 0