# [ GGGenome | 2025-04-05 04:37:39 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TCCTCACGTGATCCACACTC # count: 19 # query: GAGTGTGGATCACGTGAGGA # count: 1 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins CF508466|CF508466.1 USDA-FP_123000-969 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-68_B07 5', mRNA sequence. + 37 56 GACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCGTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCT 1 156 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 CF508656|CF508656.1 USDA-FP_124000-159 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-6_C05 5', mRNA sequence. + 31 50 TCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGG 1 142 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 CF509014|CF509014.1 USDA-FP_124000-519 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-73_E03 5', mRNA sequence. + 37 56 GACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCGTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCT 1 156 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 CX043432|CX043432.1 UCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence. + 30 49 CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 149 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 DN618922|DN618922.1 UCRCS11_03D13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003D13, mRNA sequence. + 26 45 GCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 145 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 DY261953|DY261953.1 KN0AAP4YI18FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence. + 17 36 CGCAAAAACCATCTTCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 136 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY697945|EY697945.1 CS00-C3-700-066-B09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence. + 62 81 CCCACGCGTCTGCCCACGCGTCCGCGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 181 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY698910|EY698910.1 CS00-C3-700-077-C03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence. + 49 68 CCACGCGTCCGCGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTATAGATGTTTGTATTGTCGGGGTTGCTC 1 168 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY706892|EY706892.1 CS00-C3-701-062-E05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence. + 49 68 CCACGCGTCCGCGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 168 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY707819|EY707819.1 CS00-C3-701-072-H11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence. + 38 57 CGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 157 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY716799|EY716799.1 CS00-C3-702-071-F02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence. + 47 66 CCACGCGTCCGGACATTTCTGCGCTTCCCCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 166 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY719136|EY719136.1 CS00-C3-702-102-E02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence. + 54 73 CCACGCGTCCGCAGCACGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 173 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY753130|EY753130.1 CS00-C5-003-055-D01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence. + 76 95 AGGGTCCGGGTCCGGGAATTCCCGGGGTCGACCACGCGTCCGCCCACGCGTCCGCACCCGCAACCCCTTTTCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCATATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 195 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY759806|EY759806.1 CR05-C1-100-020-B10-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence. + 26 45 CACGCGTCCGGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 145 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY790434|EY790434.1 CR05-C3-700-123-B10-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence. + 37 56 CGACATTTCTGCGCTTCCCCCCTTTAAACCATCTCCTCCTCACGTGATCCACACTCACTCTCAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 156 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 EY792394|EY792394.1 CR05-C3-700-142-A04-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence. + 14 33 CAAAACCAACTCCTCCTCACGTGATCCACACTCACTCTGAATCTCACAAATCGTGATTGGCGTATGTACAAATGGCTCCAGCGGCTTCATCTGATTCGATTATCCTAAACTATGTTTGTATTGTCTGGGTTGC 1 133 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 FC927952|FC927952.1 KN0AAP4YI18FM1 TF Citrus clementina cDNA clone KN0AAP4YI18, mRNA sequence. + 17 36 CGCAAAAACCATCTTCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 136 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 FC931562|FC931562.1 C34106E05EF PostHarvP1 Citrus clementina cDNA clone C34106E05, mRNA sequence. + 50 69 ATTTCCTCAGCACGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTC 1 169 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 OY754319|OY754319.1 Citrus sinensis genome assembly, chromosome: 2. + 20890410 20890429 CGGACATTCCGCGGCCTCTATATAATCAGAAGTTCAGAACAACTCTTCGCCATTTCCTCAGCACGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCACTCTGAATCTCGCAGGTAAATTCCATGATGGAGTTTTTTTTTTTTTTTTTGACCCCTATTATTGAAGTAATTCAAATGAAAAAGCTAAAAAAAAAAGTG 20890310 20890529 TCCTCACGTGATCCACACTC TCCTCACGTGATCCACACTC |||||||||||||||||||| ==================== 20 0 0 0 OE840385|OE840385.1 5_Tge_b3v08. - 182666 182685 ACATTTAGTATTGGATGTGTGCTGAGTACGGTTTGAAAGAGAAGCCGATAGGTAAATGTGAAAGAAGTATCTTACCTGGGTTTGGACACGTTGATAGGATGAGTGTGGATCACGTGAGGAAGCACATATATGAAGGTAGAGTGTGTGGGGATCAAAAGGAAGGGGTAGGCGATGTAAGACATGGCTAAATATTGTAGACGTATGTATGAAAAAAAGAAAC 182566 182785 GAGTGTGGATCACGTGAGGA GAGTGTGGATCACGTGAGGA |||||||||||||||||||| ==================== 20 0 0 0