# [ GGGenome | 2025-04-05 05:13:19 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TGAAGGAAAAGGCTTCACCA # count: 12 # query: TGGTGAAGCCTTTTCCTTCA # count: 14 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins LR584388|LR584388.1 Rhinatrema bivittatum genome assembly, chromosome: 2. + 397347448 397347467 GGGTACGCTGAGGAGTTTGTACAGAAGATGAGAAGACTGAGATACAGAACCCGGAACTGGAACTGGTAGTTGTAGCTTGAATACCCAGTAGCTCAGGATATGAAGGAAAAGGCTTCACCAAAGAAGGAGTGGTAGTGGCCCGGGGTACAGGGTAAACCGCAGGAAGGCTTCAGTAAAGCTTGACTCGTAGAAGTCTGTAAGAGGTACTCACTGGTGGAGG 397347348 397347567 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 LR584389|LR584389.1 Rhinatrema bivittatum genome assembly, chromosome: 3. + 342864414 342864433 AGCTCTCGCTGGACCCTAATCGATTATCCTTAGTTGGCTTTCTCAGTCAACACAGGCACACTACAATAAAGCCTGAAAGTGTCCTTGTGTAAATGTAACCTGAAGGAAAAGGCTTCACCATTGCAGTCCCTGAAGCAATTCCTAGTTTAGGTCATCGTAGAGTGAAAGCTGCAACCTTGTCTTCTACTGTTACCTGTTATTTGGGTCTCCGCTACTCTTG 342864314 342864533 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 DW503714|DW503714.1 GH_TMIRS_076_H07_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence. + 203 222 TACTTTGGGGTGACGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAAAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCTTCTTCCAAGCGCCACCAGC 103 322 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 EE592884|EE592884.1 EST486 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 7-b11 5', mRNA sequence. + 105 124 TACTTTGGGGTTTCGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAAAGGCCTTCCTTCAGGAAGGTGCCATCTCTGGCTTCTTCCAAGCGCCACCAGC 5 224 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 ES810960|ES810960.1 UFL_245_95 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. + 649 668 TACTTTGGGGTTTCGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAAAGGCCTTCCTTCANGAAAGTACATCTCTGGCTTCTTCCAAG 549 757 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 EV488291|EV488291.1 137C06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 569 588 TACTTTGGGGTTTCGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCCAGACATTTATGCCAAAAAAGACCTAGAGCATCTTGATAAAATGCTTCTTCCAGAAGGACACCTCTGGTTCTTCCAGCGCACCAGCATTCCCT 469 688 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 JK805012|JK805012.1 A06-GC8209 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 354 373 TACTTTGGGGTTTCGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATAAAAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCTTCTTCCAAGCGCCACCAGCCTCTCCACTCTCTTTCATCTCAAGAGG 254 473 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 JK810353|JK810353.1 H01-GC7888 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 199 218 TACTTTGGGGTTTCGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAGAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCTTCTTCCAAGCGCCACCAGC 99 318 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 CP032575|CP032575.1 Gossypium turneri isolate D10-2 chromosome D10_05. + 55170037 55170056 TACTTTGGGGTGACGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAAAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCTTCTTCCAAGCGCCACCAGC 55169937 55170156 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 CP106692|CP106692.1 Gossypium herbaceum isolate Zhongcao1 chromosome 5. + 89555080 89555099 TACTTTGGGGTGACGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAAAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCTTCTTCCAAGCGCCACCAGC 89554980 89555199 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 CP106709|CP106709.1 Gossypium bickii isolate GPG1lz chromosome 13. + 144301249 144301268 TACTTTGGGGTGACGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTATCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACACTAGAGCATCTTGATAAAAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCGTCTTCCAAGCGCCACCAGC 144301149 144301368 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 CP106734|CP106734.1 Gossypium rotundifolium isolate GPK201 chromosome 13. + 191407530 191407549 TACTTTGGGGTGACGGTAGACCGGTCCAAGTGGTGGGATTTAACAGCAGTGGTGGTCATCCTTATATGTTACCGCCTTCTCTTCTTCATCATTCTGAAGATGAAGGAAAAGGCTTCACCATTTTTGCAAGAAATTTATGCAAAAAAGACGCTAGAGCATCTTGATAAAAGGCCTTCCTTCAGGAAGGTACCATCTCTGGCTTCTTCCAAGCGCCACCAGC 191407430 191407649 TGAAGGAAAAGGCTTCACCA TGAAGGAAAAGGCTTCACCA |||||||||||||||||||| ==================== 20 0 0 0 OX460369|OX460369.1 Onychomys arenicola genome assembly, chromosome: 23. - 26558037 26558056 ACCAGGATGGACAGCTTTGGTGGTTCAGTATCATCCGATTCCTGACAGTAGACAGGAAACTGTAAATCCCTGATCGATAGGTCACGCATGGAGCCACCTCTGGTGAAGCCTTTTCCTTCAGAGAGAAGTAACCCATCCTGGAAAACTTCCTTCCTCTACAGCTCCCTGTCCACAGATTTCTAGCCATGTCATCACCATTCTTCACCACTGTCAAGAGATC 26557937 26558156 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 OX460464|OX460464.1 Onychomys arenicola genome assembly, chromosome: 23. - 25079948 25079967 ACCAGGATGGACAGCTTTGGTGGTTCAGTATCATCCGATTCCTGACAGTAGACAGGAAACTGTAAATCCCTGATCGATAGGCCACGCATGGAGCCACCTCTGGTGAAGCCTTTTCCTTCAGAGAGAAGTAACCCATCCTGGAAAACTTCCTTCCTCTACAGCTCCCTGTCCACAGATTTCTAGCCATGTCATCACCATTCTTCACCACTGTCAAGAGATC 25079848 25080067 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 BQ410635|BQ410635.1 GA__Ed0032G10r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0032G10r, mRNA sequence. - 373 392 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGTCACCCCAAAGTA 273 492 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 CO101609|CO101609.1 GR__Eb0028C09.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0028C09 5', mRNA sequence. - 237 256 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGAAACCCCAAAGTA 137 356 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 CO103213|CO103213.1 GR__Eb0031D23.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0031D23 5', mRNA sequence. - 229 248 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGAAACCCCAAAGTA 129 348 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 CO129819|CO129819.1 GR__Eb31D23.f GR__Eb Gossypium raimondii cDNA clone GR__Eb31D23 5', mRNA sequence. - 229 248 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGAAACCCCAAAGTA 129 348 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 DT049972|DT049972.1 COT_DT_E11 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (NM_104028) ABC transporter family protein; protein id: At1g51500.1, mRNA sequence. - 346 365 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATAATGGTACCTTCCT 246 414 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 JK703818|JK703818.1 H06_427262.90.S1104123241.anther-SP12186 Normalized cDNA library of anther of upland cotton cultivar CCRI36 Gossypium hirsutum cDNA 3', mRNA sequence. - 340 359 GCTGGTGGCGCTTGGAAGGAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGACGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGAAACCCCAAAGTA 240 459 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 JZ111597|JZ111597.1 B03_51707.15.S1108263237.LDYN1-10287.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence. - 309 328 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGTCACCCCAAAGTA 209 428 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 JZ113412|JZ113412.1 C09_51672.33.S1108253424.LDYN1-8961.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence. - 352 371 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGTCACCCCAAAGTA 252 471 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 CP032247|CP032247.1 Gossypioides kirkii chromosome KI_05. - 4877798 4877817 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGATCTACCGTCACCCCAAAGTA 4877698 4877917 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 CP032557|CP032557.1 Gossypium raimondii isolate D5-4 chromosome D5_05. - 5307741 5307760 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGAAACCCCAAAGTA 5307641 5307860 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 CP106702|CP106702.1 Gossypium herbaceum isolate GPA1alz chromosome 5. - 6927627 6927646 GCTGGTGGCGCTTGGAAGAAGCCAGAGATGGTACCTTCCTGAAGGAAGGCCTTTTATCAAGATGCTCTAGTGTCTTTTTTGCATAAATTTCTTGCAAAAATGGTGAAGCCTTTTCCTTCATCTTCAGAATGATGAAGAAGATAAGGCGGTAACATATAAGGATGACCACCACTGCTGTTAAATCCCACCACTTGGACCGGTCTACCGTCACCCCAAAATA 6927527 6927746 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0 OU343003|OU343003.1 Lineus longissimus genome assembly, chromosome: 12. - 15880378 15880397 ACACATCGGTGAAATCTAATTACCGATCCATAACATTTCATGACAGACTCGTAAACAAACACAACCTAAACCTCTTCAAACTCGATTAAAAATCATAAAATGGTGAAGCCTTTTCCTTCAATGTGAGTGATTCTCCAATTCAAATAACGATCATGAAATAATTTTCAATAATGAAAATATATCTCTATTCGAGTAGGGTAAAGTTACCATCAAGCTGCCA 15880278 15880497 TGGTGAAGCCTTTTCCTTCA TGGTGAAGCCTTTTCCTTCA |||||||||||||||||||| ==================== 20 0 0 0